Zces015682.1
Basic Information
- Insect
- Zerene cesonia
- Gene Symbol
- -
- Assembly
- GCA_012273895.1
- Location
- JAAMXH010000035.1:1463453-1470014[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.019 1.2 9.6 0.5 1 23 52 75 52 75 0.97 2 27 0.00021 0.014 15.7 0.3 2 23 106 128 105 128 0.94 3 27 0.00019 0.013 15.8 0.4 2 23 151 173 150 173 0.95 4 27 0.0071 0.47 10.9 1.3 1 23 178 201 178 201 0.95 5 27 0.14 9 6.8 0.5 1 23 206 229 206 229 0.91 6 27 0.0077 0.51 10.8 0.2 2 23 235 257 234 257 0.91 7 27 0.058 3.8 8.0 0.3 2 23 265 287 264 287 0.94 8 27 0.02 1.3 9.4 0.1 2 23 294 315 293 315 0.96 9 27 1.5e-05 0.001 19.3 1.5 1 23 321 343 321 343 0.95 10 27 0.0011 0.072 13.4 5.1 1 23 349 372 349 372 0.96 11 27 0.01 0.69 10.4 1.5 1 23 472 494 472 494 0.99 12 27 0.32 21 5.7 0.1 3 21 521 539 519 542 0.88 13 27 0.22 14 6.2 0.5 2 23 565 587 564 587 0.94 14 27 0.00065 0.043 14.1 0.8 3 23 595 616 594 616 0.98 15 27 0.0038 0.25 11.7 1.1 3 23 623 644 622 644 0.97 16 27 0.01 0.67 10.4 3.4 1 23 650 673 650 673 0.98 17 27 0.00076 0.05 13.9 2.2 2 23 680 702 679 702 0.95 18 27 0.022 1.5 9.3 1.8 1 23 708 730 708 730 0.94 19 27 0.072 4.7 7.7 0.9 1 23 736 759 736 759 0.88 20 27 0.0056 0.37 11.2 1.6 1 23 810 832 810 832 0.97 21 27 0.094 6.2 7.3 0.1 2 23 901 923 900 923 0.95 22 27 0.04 2.7 8.5 0.9 2 20 930 948 929 950 0.92 23 27 5.4 3.6e+02 1.8 0.1 2 23 956 977 955 977 0.86 24 27 0.25 16 6.0 1.9 1 23 981 1004 981 1004 0.96 25 27 0.0002 0.013 15.8 0.9 1 23 1010 1033 1010 1033 0.97 26 27 0.00058 0.038 14.3 2.2 3 23 1041 1061 1040 1061 0.96 27 27 0.0082 0.54 10.7 6.3 1 19 1067 1085 1067 1090 0.93
Sequence Information
- Coding Sequence
- ATGCCTAATTTTTTTCCAGGTTCAAATACCGACCCAACGGGGgacaaacaaaagaaaaaggaaatggtccgaaaattattaatcaaaaggCGTAACATTGAGTATGTTTTGCAATACAGTAACGCAACCCCATTCTTATATTACAAAGCACGATATAGATGCTTCTATTGTACGGAACCCATGAAAGACCCTGACATGCTTCGCGAACACACATTGAAAATGCATCAGTTCGCTAACCTGGAACTGGTGATACACGACCGGACGAAAAACAATAGAAACTGGGACGCCGCTGTTAAAATTGACATTTGTAATCTGTCCTGCAAACTGTGCCCCCAAATGTTCAAGGATCTGGAACAGCTCATACACCACCTAATCATCGCACACGACGCGGAATATGACATGAGCGTACCCAACTGTCTCCTGCCCTTTAGATTAAAGAAAGACCACCTCACGTGTCCGATTTGTGATACGAAATTCGTCTCGTTCGAATACCTCCTGCGGCACGCTAATAAGTACCACCTGTCCCACGATTACATATGTGACGTATGCGGGACCAGCTTCCAAGGTGTGAACCATCTGCGAATGCACAACCGATACTACCACAAGGAGGGCGGCTACACCTGCGACTACTGCGGCATCAAGCTGGAGACGCTGTCGAAGAAAATGCTGCACGAAAAGAACATACATCTAGTCAATCTGTTGACCTGTCCCTACTGTCCGGAGATATTCAAGAGTCCATACTTCAAGAAACTGCACCTCGCCAATGTTCACGGGCTGGCGGATTTGAAGATAAAATGCCGGTATTGCCCGAAGGTGTTCCTGCAGGAGGGCATCATGTCGCGGCACATGCGGCGGGTCCACTTGCGCGAGAGGAACGTGGAATGCCCGATATGTGGGGACAGGTTCTTCGGACAGTACGACGTGAAGCTGCACATGGTGAAACACAACGGGGACAAGAAGTTCATCTGCTCGGTTTGCGGCAAAATGTTCGGCAAGCGGAGCAACTTGAACAAGCACGCCCACTTGCATACGGGCAGGAAGGATTACAGTTGCCGTATGTGTGGGAAGGAATTCGCCCACCGGTCCAATTTAAGGTTCCACTATAAGAAGAAGCACCCGCAGTACGTCGAGGAAACGGCGGTGGTTGATGAGAATGCTTTTAAATCAATCAAGAACTGTTATCGTTGTCCCGAGAAGGAAGAATGGATGCtatataaacgtattttaatttcaggAGTGTCTAGAGGTTGTGACGCGAGCAATGCTATCGCGGATTCGTTCGAAGGCATTCTCGGCTCGCTTACCACGAAAACAGAACTGTCCACTaaagaaaaacgaaaaattatgAGGAACAATGTCCTACAGGTGCTGATCAAATCGACTGTGATGCCTTTCAGATGGCTAAAGAGCTCCTACAGATGCTTCTACTGCTATGACATTTTCCAAGAATCCTCAGAACTGAAAAACCATCAAATAACGCACGTCGGTGATGAAATTAAGGAGATAACTATGAGCAAATACTGGGAGCCCATTGTGTACGTTGATATTTCGAACTTAGCTTGCAAGCTCTGTACAGAAAACGTAACGGATCTCTACGAATTGATAGACCATCTGGTGGACAAACACGGGACGGTTTACAATAAAGATGTCGGCACCTGCATGATACCGTTCAAACTGGACAACTTTTCACTCAACTGTCTCACTTGCGGCGCCGGGTTCTACACATTCGGCCCTCTATTGCATCATACGAATAAGGACCATAAGGGGACATCGGCCATCCTATGCGAGGTCTGCGGGCAGCACTTCAAGGACGGCAATCTGCTCCGCTTGCACATGAAGTCCGTTCACGAGAACTCCGGTTTGCTCTGCCAAGAGTGCGGGGACAAATTCGAGACGCGATACAAGCTGAAAAGCCACCAGAAGTACGAGCACGATATGGACAAAAAGTACAAGTGTCTTGTGTGCACTCAGATATTCAGGAGTCACTACAAACGATCGAGGCACATGGCAACTGAGCACAAGAACAGAGAGGAGATCAAGTGCCTGCACTGTCCGAAGACATTCGTGTTCCGCAGTATGATGATGACGCATCTGCGCGACACCCATTTGAAAGTCAGGAATCACATATGCAGCGTGTGCGGCTGGAAGGCATTCAACAGCAATCGGTTGAAGAACCACATGTATAAGCACAGTGGGGAGAAAAATTTCAAGTGCGACGTGTGCGAGAAACTGTTCACGACGCGGAAGATTATGCGAGCGCATTTCGCGAGGATGCATAAGGCTGTACAACCGCCGACTATGGGCCGACGGCAAGAAGAAAGCCAATCTATAGACAAAGACGAGGAGAAAATGAAAGCAATAAGGTTCAACATAAGTCAAATCCTACTCAAAGGTTCGGTCATGCCATTCCGGTGGTTAAGAACGTGCTTCCGATGCTTTTACTGCTATGAAATGTTCGAAATATCAGACGAATTGAAGTCCCATCAAACACAACATACCGTGGAAGATGTGCATAAAGCAATCAGCAATTATTACGAACAAACCGTGTTTGTTGACGTCTCGAATTTAAGCTGTAAGTTATGCGCGTGTATCATAGACAATATTCACCAACTGGTCGATCATTTGACGACCGAACATGGGATGTATTTCGATATCAGTGCGGGGCTATGTATGATTCCCTTTCAGTTGGATGAGAAAAAGCAATGCTTATTGTGCGGGATACCAATGAGATCGTACGGGAATTTGGTAGCGCACATGGTGAAAAAGCACTGCAATATAACGAAAATGTATTGCGCCATTTGCAACACGCGGTTCAAGAGTTCGAAGCAGATCTGTTCGCATGTCCAGGGTGTTCAGAATGAAATCTCCTGCTCCGAATgtagtattaatatagaagCTAGTCATTTAGGGGACCACATGCGAGGCGTACACGGCAAAAGATACAGATGCTTGGCCTGTTGGGAGTTTTTCAAGACGCATTATCAGAGATCACTGCACATGGCATCCATACACAAACGGCGGGAACTCTTCAAGTGCCTTTATTGTCCAAGGACATTCATCTTTGCGAGTATCCTACGCAGACACATACGAGAGAGGCATTTGAAAGAGAGAAATGCGATCTGTCATATATGCGGCTGGAAGACGTTTGGACAGCACGAGCTGAAAGCACATATGATGAAACATGTCAGTGTCAAGGATCATAAGTGCCCGTTCTGtgagaaaatgtttaaaagtaagaaaaatatgCGACAACACTGTGTTAAGAGTCatcaataa
- Protein Sequence
- MPNFFPGSNTDPTGDKQKKKEMVRKLLIKRRNIEYVLQYSNATPFLYYKARYRCFYCTEPMKDPDMLREHTLKMHQFANLELVIHDRTKNNRNWDAAVKIDICNLSCKLCPQMFKDLEQLIHHLIIAHDAEYDMSVPNCLLPFRLKKDHLTCPICDTKFVSFEYLLRHANKYHLSHDYICDVCGTSFQGVNHLRMHNRYYHKEGGYTCDYCGIKLETLSKKMLHEKNIHLVNLLTCPYCPEIFKSPYFKKLHLANVHGLADLKIKCRYCPKVFLQEGIMSRHMRRVHLRERNVECPICGDRFFGQYDVKLHMVKHNGDKKFICSVCGKMFGKRSNLNKHAHLHTGRKDYSCRMCGKEFAHRSNLRFHYKKKHPQYVEETAVVDENAFKSIKNCYRCPEKEEWMLYKRILISGVSRGCDASNAIADSFEGILGSLTTKTELSTKEKRKIMRNNVLQVLIKSTVMPFRWLKSSYRCFYCYDIFQESSELKNHQITHVGDEIKEITMSKYWEPIVYVDISNLACKLCTENVTDLYELIDHLVDKHGTVYNKDVGTCMIPFKLDNFSLNCLTCGAGFYTFGPLLHHTNKDHKGTSAILCEVCGQHFKDGNLLRLHMKSVHENSGLLCQECGDKFETRYKLKSHQKYEHDMDKKYKCLVCTQIFRSHYKRSRHMATEHKNREEIKCLHCPKTFVFRSMMMTHLRDTHLKVRNHICSVCGWKAFNSNRLKNHMYKHSGEKNFKCDVCEKLFTTRKIMRAHFARMHKAVQPPTMGRRQEESQSIDKDEEKMKAIRFNISQILLKGSVMPFRWLRTCFRCFYCYEMFEISDELKSHQTQHTVEDVHKAISNYYEQTVFVDVSNLSCKLCACIIDNIHQLVDHLTTEHGMYFDISAGLCMIPFQLDEKKQCLLCGIPMRSYGNLVAHMVKKHCNITKMYCAICNTRFKSSKQICSHVQGVQNEISCSECSINIEASHLGDHMRGVHGKRYRCLACWEFFKTHYQRSLHMASIHKRRELFKCLYCPRTFIFASILRRHIRERHLKERNAICHICGWKTFGQHELKAHMMKHVSVKDHKCPFCEKMFKSKKNMRQHCVKSHQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -