Basic Information

Gene Symbol
-
Assembly
GCA_012273895.1
Location
CM022630.1:521070-527467[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.1e-05 0.061 13.3 0.4 3 45 4 62 2 63 0.75
2 2 6.9e-06 0.0069 16.3 0.2 9 45 275 327 275 328 0.80

Sequence Information

Coding Sequence
ATGCCTCTGccgtttaataaaacattggaTTTAAAATTGCTGCAATTAGTGAAGGATAATCCAATAATATACAACACGAAGCACAAGAAATACCTAGACTTTGATAATAGAGAGGTAGTTTGGCAAAAAATCGGCGATGCACTTAATAGGccagCCAGCATATGCAAATCTCGCTGGATCAACATCCGGGACATGATGCGGCGGAAGCTCAGGGACCGGCTTCGGAACCCGCACCAAAAGAGCTACAACTACAAATACGAGGAGGAGCTCTCCTTCATGCTCCCCTACTTCCGAGAGATGAGTTCAAACGACTACGCGGACTATTTGGAAGAGGCTAGCGAAGTCGAAATACCCGTAGAAGTGTTTGGAACAGAGGTATTTGGGCGGGAAACCGAGCTGAAGCCAGTGTTTCGCAAACGGGACGACACCTTCGATTTCCAGGACTTGAACCCCTCTGATCCGCTCGATGTCTTTCTTATCACAATAGGGTCAACGCTTCGCAAATTGACACCATGTTACCTGAATCAAGCTAAGAGCAAGATTTTCCAAATTGTCCAGGATTACGAGCTGCAGCAGATCATGGAAAAGGACAGCCAGCCAAACACCAGTACTGATAATAGAACGAATGATTCAActgtcaaaataaaacagtgcTGCCAGTATATCACTTTTACTGTTCCTAGTTTTAGAGGTAATATGGCAACACCATTCTATATTCATTTGCTCGTTACGATAATACGATTCACGACCACGACAACGAGTACGACGCGCACGACGGTGCGACGTTGCCGCGTCGCCATGTTCCCGCCGCCAGAAAAATTCgacaagaaattaataaaactcgTCCGAGAAAACCCCGTGCTGTATGATAATAATCATGTCAAATATATGGACTTTAATTCACGGGAGGTTGCTTGGCAAAAGATTGGTGACGAGCTGAAGCGGCCagcttCAGATTGCAAAGACAGATGGATAAACATAAGAGATGTGTACAGGCGAATACTACGACAGTTGACAAACAACAAAGGCAGCCGACGCaagcaatataaatatgagaaaGAGATGTCATTCTTAAGGCCATTCTACCGTGATATCGTTCAAATAAGCGAAGAGGACTCAGATAGAGGCAGTGATCAAATGAACGATACATGTGAAGGTCGCGATAGCTGCGATGACTCAGATGAGCCAATAAAGCCAAAGGTGGAAAAGACAACAGAGAGAAGGCGGAAGAAAAAGCGTGAAGTTATTGATATGCAAGAACAGGAGTCTTCTTCAGTATTCGCTGACACATCAGGACCGGCTGATTTCGATTCATCGGATCCCGTAGATGCATTTTTACTCAGCATTGGGGCGACTTTAAGAACGTTCTCTCCGTATCATCTCAATGTAGCGaagagtaaaatattttctatcgtACAGGAGCATGATCTTCAGCAAATTGTTCAAAAACAACGCAACGACACCCCCCACGGACATGATATTAAGCTATCGTCGTCGGATATATTTATGCAATAG
Protein Sequence
MPLPFNKTLDLKLLQLVKDNPIIYNTKHKKYLDFDNREVVWQKIGDALNRPASICKSRWINIRDMMRRKLRDRLRNPHQKSYNYKYEEELSFMLPYFREMSSNDYADYLEEASEVEIPVEVFGTEVFGRETELKPVFRKRDDTFDFQDLNPSDPLDVFLITIGSTLRKLTPCYLNQAKSKIFQIVQDYELQQIMEKDSQPNTSTDNRTNDSTVKIKQCCQYITFTVPSFRGNMATPFYIHLLVTIIRFTTTTTSTTRTTVRRCRVAMFPPPEKFDKKLIKLVRENPVLYDNNHVKYMDFNSREVAWQKIGDELKRPASDCKDRWINIRDVYRRILRQLTNNKGSRRKQYKYEKEMSFLRPFYRDIVQISEEDSDRGSDQMNDTCEGRDSCDDSDEPIKPKVEKTTERRRKKKREVIDMQEQESSSVFADTSGPADFDSSDPVDAFLLSIGATLRTFSPYHLNVAKSKIFSIVQEHDLQQIVQKQRNDTPHGHDIKLSSSDIFMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-