Basic Information

Gene Symbol
kn
Assembly
GCA_012273895.1
Location
CM022620.1:5573346-5583154[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.5e-53 3.6e-49 167.4 0.0 11 135 111 224 102 230 0.92

Sequence Information

Coding Sequence
ATGTCGTCGTCCCGCTCTCGAGGCGAGGGCGTGTCCCAAGGGCGCCTCCCACAGTCCGCGGGGACGGACGGGGGCTCCGAAGCCCGAGCACTCGGCGGCGCGCTCCCGCGACGCTTGTTAGTGTTCCGCAAATCCACAACGGGATCGCCCTTAAACGCGGCGGCGGGCGGGTACACTGGCTCGCCGTGGCCGCCGCTGGAGTTGGACCCCGTGGGATGGGGTCGCAAACTGTACCCATCAGGAGCACCAAGGTCGTCAGgcGGACTTATGTTCGGCCTGCATCACCAAGAGGCGGCGGGTGTTCACGCACAGCCTCGCGGGCCCGTCACGTCGCTGAAAGAAGAACCACTCACCCGCGCTTGGATGACACCGACCTCCTTAGTTGACAATACGAACGTGGGTGTCGGTCGGGCGCATTTCGAGAAGCAGCCGCCAAGCAACTTGCGCAAGAGCAACTTTTTTCACTTTGTCGTTGCGTTGTACGACCGCGCGGGGCAGCCAATCGAGATTGAACGCACCGCTTTTATAGGATTTATTGAAAAGGACCAGGAAGCAGAAGggcaaaaaacaaataatggaATCCAATATAGGCTTCAACTACTTTATGCAAACGGTATCAGACAAGAGCAGGATATATTCGTTCGGCTAATAGACTCCGTTACGAAACAGGGTCCGTACACACGTGCGACTCGCGCGACTGCCACGCGCCAGATCCCATCGCTGGCCGATTAG
Protein Sequence
MSSSRSRGEGVSQGRLPQSAGTDGGSEARALGGALPRRLLVFRKSTTGSPLNAAAGGYTGSPWPPLELDPVGWGRKLYPSGAPRSSGGLMFGLHHQEAAGVHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPIEIERTAFIGFIEKDQEAEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQGPYTRATRATATRQIPSLAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00796312;
90% Identity
-
80% Identity
-