Basic Information

Gene Symbol
kn
Assembly
GCA_012273895.1
Location
CM022620.1:5605528-5615664[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.2e-137 3.4e-133 444.9 0.0 183 387 21 257 17 261 0.96
2 2 0.0012 9.7 4.2 4.5 419 502 265 350 257 386 0.59

Sequence Information

Coding Sequence
ATGTCGTCTGTTGGCACAACAATATTCGGCGCGGCGGCATTGCTGCTGCCGGAGgctatATTTTTTCTCAAATTCTTCTTAAAATGCAACCAAAACTGCTTAAAAAATGCCGGCAACCCCAGAGATATGAGAAGATTTCAGGTGGTGATATCAACCCAGGTGATGGTAGATGGCCCTCTCCTGGCCATATCGGACAATATGTTCGTACACAACAACAGCAAGCACGGCCGCCGGGCTAAGCGCCTAGACCCGACTGAAGGTACAGAAGCTGCCCTCGAACCTACTTCGGGGTTATATCCGCCGTTGCCCGTAGCAACGCCGTGCATCAAAGCGATATCTCCTAGTGAAGGCTGGACGTCAGGGGGTTCGACTGTTATAATAGTGGGGGATAATTTTTTCGATGGCCTTCAAGTAGTCTTCGGAACTATGCTTGTATGGAGTGAGTTAATAACGTCACACGCAATAAGAGTTCAAACGCCTCCGAGACACATACCCGGCGTCGTGGAAGTTACATTGTCGTACAAGAGTAAACAGTTTTGTAAAGGAGCGCCCGGGAgatttgtttatgtttTGGGGCAGCTAatgattgattttgtttttctctCTCGCATAGCAGCTCTCAACGAGCCTACGATAGATTACGGATTTCAGCGGCTTCAGAAACTTATACCGAGACATCCGGGCGATCCGGAGAAACTGCCTAAGGAGATAATATTGAAGAGAGCCGCGGATTTAGCGGAAGCGTTATACTCGATGCCACGCAACAATCAGTTGGGTTTGGGAGCTCCGCGCTCGCCGCCCGCTAGCATGCCTTTCAACTCCTACACTGGACAGCTAGCTGTTAGCGTACAGGACACTGCTACTTCGCAGTGGACGGAAGTGTCTCTCGGGCCGTATCATCCGGCGAATGTGAACGGACACTTGTCGTCCGACCATCAGcaatataatacgtataaCCAAAAAGATAGCGGACATTACATTGAAAGAAACGTGGAGTCTAAAAGCGCTGACTGTCCCGCAAACACTCATACAAAATGCAACGGCAGTATGAAAGGGCAAACGGGAATGAGTGGGCTGGTGTCGTCTCCATTCAGTGTGAATCCATTCTCCCTCCCGACCTGCAGTGCGCAACAATACGCGCAAACGGCTCCTCTCGCATCGAAGTAA
Protein Sequence
MSSVGTTIFGAAALLLPEAIFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTEAALEPTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVLGQLMIDFVFLSRIAALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTATSQWTEVSLGPYHPANVNGHLSSDHQQYNTYNQKDSGHYIERNVESKSADCPANTHTKCNGSMKGQTGMSGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01561757;
90% Identity
iTF_01561757;
80% Identity
iTF_01561757;