Basic Information

Gene Symbol
PRPF3
Assembly
GCA_012273895.1
Location
JAAMXH010000035.1:295943-357940[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.9e-10 5.2e-07 29.8 0.1 2 89 265 337 264 337 0.87

Sequence Information

Coding Sequence
ATGCTAGTTGACATCGGATCGAATTGTATCGAAATtggttcaCTGGTGGGCGCCCCATGTGGACAGCATGGCCAGTACACGTTCTACAAGGCGCTGAGGCTGACGGGACCTCTGGAGAGGATCATAGCCATCGGTGATTTCTTCTTCGTCAGGATATGGCAGGATTCAGAGCTGGTGTCCATTGGGGAACTGCAGCTGCTCTGGACGGACCGCGTCTCCGACCAGACCCTGGTCTCGCTGCGGTTGTACTTCCTCCCCGAGAACACCCCGGATGGAAGGGGGCAGCATGGTCAGGATGAAGTGCTGGCGATCAACGACAAagtggtccttcgagccgagGACCTCCTCTCGTGGGTGTGTTCGGGCGGCGGCTGGCGCTGGGGCTTGCGTGCGGTGTGGCGCGGCGCGTGCGCACCGCCCGCCGAGCTGAAGCACACTGCGCCGCTGCACCACACGCGGCTCGACTTCAGCGACGACACCTTCGAATACCCCGAGCTGGAGGGCCACGAGTTCGTGTGCAACCACCTAGCGCCGAAGCTCAAGGGGCGGccgcgcgggcggcggcgggcgcgggcgcgctCGCGTGACCGTGACCACGACCCCGACCGCGACCGTGACTCGCGGTCCAGCGACAGTGACGTCACGCCGCCGGAGCCACGGACTCCACGTAGAGTCTCCCTCCGAAACGGCGGCGACAAGCAGAGCGAAGATGAAGACGAAGCGGAGAGCCGAGTGGAGGAAAGAGAAGAGAAGAGACCGGACAGAGAGGAGAAGAGACAGGAGAGCGCCAAGGACGAGGAGTTCCTGCAGCAGCTGAGGGAGTTCTATAAAGACAGGAGTTACATGAAGATTGCGCATACGaaaaatataTCGCTTCGCAAGCTGTACGGGCGGGTCCGCTCGTGCGGGGGCTACGAAGCGGCCTGCCGAGGGCGGGTGTGGAAGTTGCTGTATGGCGGACTGGCGCCGAGGGCCAGGAGGCTGTACGAGAGATTCCTGCTCCTCTTCGAGAACCACCAGCGGCGGGAAAACCCAAAACTCTTCCCCAAACTGAACGGCAAAATAGAAGAACCAAAAACGATAGACACGATAGACGTCACGGACTCCCCCCTGCGGGACGTAGACAGTAAGACCGACTTACCGGAAAAGAGGTTGCGAACTCCTTCGCCGAGGGGTGACGAAAAGCTCATATTGGACAATGAAACGGGGGAGTTATTGAAGGAGGAGATGAACATAACCTCGAAACCCGCGGAGGAGTTGAATAGAGAATTCCTCGAGTCGCTGTCGAGCGAGAAGGAGAAGGAAGGGGAGAAGGAGGGCGGAAAGGACGGGGAGGTGAAGATATCCGTGAAGCCGGTGGAGCAGTTGATAGATATGAGGGTAGTTGAggaagggaaggaaaaggaagaTGCAAAGGAAGGGAAGTTTCTGAATGACCTGGCTCAGAAGCAATTCGGACACGACGATACTAAAGGAGCTATCGGACGCGCAGAGTTGCATCGCAACGAACGCATTAACCAGTCTGTCGTCGTTAAGCGAAAAGTACGCCGTCAATGGGCACAGCGCGGTGAGCGGTGTACACCTCGACCAGGTGAGATctgttcatcatcatcaccattaTTCTGTACGcaCAAAACTCGTCCAGCTGGCCGCAGCTCGCTGCGAGCTGTGCGCGTCAAACCCACTCGACCGCAACCACCGGCCAATACACcCCCTCAACCAGCAGTGCGCGTGGAGGCTTCACCCCCACCACCAGCTCCGGTCACCAACTTCGGCATTCACCACCCGGCCCCACCACCGCCACAAAGCGATGATGAAATCGTCGAGGTACCATACAAGCCAAAAACACCGGAAATCATTGACCTGGACGAGTACCCTGAAAGTCCACAGAGCGTCAAGAAGAAAAAGCTAGAAATCCTCAAGGAACGGGGGCTAGAAGTCACAGCCGTCCCGCCGACCCCCATTTGGCCGGCGCCCTTAGCGACCCCTATTACTCCCATAACACCCTTGATAAACCCCGCCCCAATAATCCTCAACCCCGCGGTCCAACACCAAATAATGACGCAAGCTCAACTATTCCAAATGTATAACATCATCCCTCCCAATTATGGAAATGGACTTCAACCCCCAAAGGTGATACAAGCCACGAGTGCGTTCGGCACATGCGGTCCGGAGAAAACGGTTTACGGCAACCCAAAGGACCCCTTCATGCCGCCGCCCCACGTACTCCAAGGAACCCCCATCAAACCGCAAAGGTCCATACAGCCCTCTGTCCCGACTCCGCAAGATATTCTAGACCTAACCTGCAAATCCCAATCCCCACCCCCACAAAAGCCAGCCGTAGAAATAGTCAGAATACCGCAATCCGTGACTCCGACCCCACAGAACTTGTCCAAAAACTACACGCTTTTAGATGGCAAAGCGGTGGTCGGTTCGAACCTGGAAATTACACTGGTTAACCCCAAGACGCCGACGCAGAAACGGCCGCCGCAGAAGCGGTCATCGAACGGTAAATTCACATCGGCTAAAACCCCGACGCCGCCCAAAGACTACCCCAAGCCGTTCCCATCCCCATCGGGGCTATCGAGAAGGGAAGTAGAAGATTTAAGATCGTCTATAGACAGAGCAATATACAGAACAATTGGTAAATCGGATAGTTCGTTGCTATCGACGGTATCGTCATGCTTAACGAATGGATATGAGCGTCGAAAAATAATAGACAGGCTATCATCACACATTGATTCAAAGAAAGCAAGCAAACTTGCTGACAAAGTGATAGCTCTCGCACAAGAACTGATATCATCATCGAAGTCACAGAAACGCAAATATGAGAGTAGCGATAAGGAGAAGGATATCAAAAGATCCCGCCACGATGACAAATACGAGTCTCGCGACGACAGACGTGAGAGGCACGAGAAGGAAAGGGAAAGGGACAGGGAGAAGGAGAGGGAAGAGGACAAGAAGAGCGACAATGGTATTGAGATACCGTCTCTTCTGCCTGAGGGGGAGACTGTTGGGTCCAAGATGGCTGGCCTCAGTGCTGATAAAATTAAGCTGATGATGGCGAACGCGCAAAAGGAAATCGAGGAACGCAAGCGGGCCCTCATGGCCCTCAAAGGGGACAAGGGCAACGTGACCGTAGCGGCCCAGACCGCCCAACAGATCAAGGTGCAGATGCAGCAGAGCAACGCGATACCGCCGCCCAGCGTCATCAAACCGATGCTGTATTCGAAACCGGCCGCTGGTGCGATGTCGGCTGAGGAGATGGAGAAGCAGCAGAAGATAGCCGAGCTGCAGGCACGGATACAGAGGAAACTGGCCGGCGGGGCGTTGCAAGCGGGCCTCTCCGGCCCCGCGCCGCTGATCCTCGACCGCGAGGGCCGCACGGTGGACCCCGCCGGCCGGCGGGTGCATCTCACGCAAGTTGTGCCCACTTTGAAGGCCCAATTGGAGAAGCTGCAGAACGAGATATCGCAGATCGCGCGAAAAACCGGTATTTCGTCGGCCACAAAACTCGCCCTGCTGGCGGCTGACGTGCCGGACTCCGATCGAGTTCCGGATATAGAATGGTGGGACAGCGTGATCCTAATGACACCCGAAGAACGTGAAGCGAAGCGAACCGCCGGCGATACGAACGACGCACGCACCGACACGCAACGCGTCGCCGATTGTAATGTTGGTGATGACGATATCGTGGATAACCTGAACGGTGACGCCATCACCAATTTAGTGGAGCACCCGCAGCAGTTGAGGCCGCCGACGGAACCGCTGAAGCCGACGTACATGCCGGTGTTCCTCACCAAGAAGGAGAGGAAGAAGCTGCGGCGGCAGAGCCGCAGGGAGGCGTGGAAGGAGGAGCAGGAGAAGGTCCGGCTCGGGCTGGAGGCGCCGCCAGAACCTAAGCTcagGATATCAAATCTTATGAGGGCACTGGGCACGGAGGCGGTGCAAGACCCCACCGCCATCGAGGCGAAGGTTCGAGAGCAGATCGCGAAACGGCAGAAGACTCACTTGGAGGCGAACAAAGCGAGAGCCCTTACTAAGGAGCAGAAGAGGGAGAAGGTTGATAGAAAAATTCGAGAGGACACAACTATGGGCGTGCATGTCGCTGTTTACAGaataaaAGACCTGTTCGAGTGCGCGTCGGCGAAGTTCAAGGTGGAGGTGAACGCGCAGCAGCTGCACATGACGGGCTGCGTGGTGCTGCACCGGGGCTGCTGCGTCGTCGTCGTGGAGGGGGGGCCCAAGCAGCACGCCAAGTACAAGAGACTGATGCTGCACCGGATCAAGTGGGAAGAGGAGACGGTGAAGGAAACGGACGGTACGGAAGTGCCGAATTCGTGCCAGCTCGTGTGGGAGGGGACCACGGCGCAACGCTCCTTTGGGGAGATCAAGTTTAAGGTGATGCCAACGGAGAAGCAAGCAAGAGAACTGTTCCATAAGCACAAAGTCGAGCACTATTGGGACCTAGCGTACAGTGGTGCAGTCTTAGGTTCAATAGATGAGCCCTAG
Protein Sequence
MLVDIGSNCIEIGSLVGAPCGQHGQYTFYKALRLTGPLERIIAIGDFFFVRIWQDSELVSIGELQLLWTDRVSDQTLVSLRLYFLPENTPDGRGQHGQDEVLAINDKVVLRAEDLLSWVCSGGGWRWGLRAVWRGACAPPAELKHTAPLHHTRLDFSDDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRARARSRDRDHDPDRDRDSRSSDSDVTPPEPRTPRRVSLRNGGDKQSEDEDEAESRVEEREEKRPDREEKRQESAKDEEFLQQLREFYKDRSYMKIAHTKNISLRKLYGRVRSCGGYEAACRGRVWKLLYGGLAPRARRLYERFLLLFENHQRRENPKLFPKLNGKIEEPKTIDTIDVTDSPLRDVDSKTDLPEKRLRTPSPRGDEKLILDNETGELLKEEMNITSKPAEELNREFLESLSSEKEKEGEKEGGKDGEVKISVKPVEQLIDMRVVEEGKEKEDAKEGKFLNDLAQKQFGHDDTKGAIGRAELHRNERINQSVVVKRKVRRQWAQRGERCTPRPGEICSSSSPLFCTHKTRPAGRSSLRAVRVKPTRPQPPANTPPQPAVRVEASPPPPAPVTNFGIHHPAPPPPQSDDEIVEVPYKPKTPEIIDLDEYPESPQSVKKKKLEILKERGLEVTAVPPTPIWPAPLATPITPITPLINPAPIILNPAVQHQIMTQAQLFQMYNIIPPNYGNGLQPPKVIQATSAFGTCGPEKTVYGNPKDPFMPPPHVLQGTPIKPQRSIQPSVPTPQDILDLTCKSQSPPPQKPAVEIVRIPQSVTPTPQNLSKNYTLLDGKAVVGSNLEITLVNPKTPTQKRPPQKRSSNGKFTSAKTPTPPKDYPKPFPSPSGLSRREVEDLRSSIDRAIYRTIGKSDSSLLSTVSSCLTNGYERRKIIDRLSSHIDSKKASKLADKVIALAQELISSSKSQKRKYESSDKEKDIKRSRHDDKYESRDDRRERHEKERERDREKEREEDKKSDNGIEIPSLLPEGETVGSKMAGLSADKIKLMMANAQKEIEERKRALMALKGDKGNVTVAAQTAQQIKVQMQQSNAIPPPSVIKPMLYSKPAAGAMSAEEMEKQQKIAELQARIQRKLAGGALQAGLSGPAPLILDREGRTVDPAGRRVHLTQVVPTLKAQLEKLQNEISQIARKTGISSATKLALLAADVPDSDRVPDIEWWDSVILMTPEEREAKRTAGDTNDARTDTQRVADCNVGDDDIVDNLNGDAITNLVEHPQQLRPPTEPLKPTYMPVFLTKKERKKLRRQSRREAWKEEQEKVRLGLEAPPEPKLRISNLMRALGTEAVQDPTAIEAKVREQIAKRQKTHLEANKARALTKEQKREKVDRKIREDTTMGVHVAVYRIKDLFECASAKFKVEVNAQQLHMTGCVVLHRGCCVVVVEGGPKQHAKYKRLMLHRIKWEEETVKETDGTEVPNSCQLVWEGTTAQRSFGEIKFKVMPTEKQARELFHKHKVEHYWDLAYSGAVLGSIDEP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-