Zces005926.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zerene cesonia
Gene Symbol
msc1
Assembly
GCA_012273895.1
Location
CM022623.1:7788893-7822443[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.2e-17 9.3e-14 51.4 0.1 9 89 715 792 708 792 0.87

Sequence Information

Coding Sequence
ATGAAGCGCGTACACGCACAGCGCAAATTCGCCGCAGGAATAAACATCCCGAATACACGTCAAACGCAACAATCAGGTGTGGATAGGAGAACCGAAACACCTCCAGAGTCTAGAGTGTTTCAGATACACACCACACCTAGCTCCATTCTTGATGTTGTGTCCTTCCAAGGTATTCACACTCACTTGCAACCCATTGTGGTATTAAAAAGGTTGGAAGATACAGCAAGTACTAGCAAAGCTAACGAAAATGGTGAAACCCAACCATCCTATCAATTCAGAGACAGGTCgaagataaaaaaaagtgtacGATGGGAACCGTGCAGTGATACAGgtatttataaaaaacgaaaattaaacCCGAATGTATACAAAAAGAAGTCGTCATATAATATTGGAGCCCTAGttaagGAACTATCTGTACCCATAACGCCACTTCCTAGTACTTCTAAAGATACAGCAGttgaGGAAGTATCTGTACACATGTCGCCTCTTCCTAGTACTTCTAAGGATACAGGagttgaGGAAGTATCTGTACACATGTCGCCTCTTCCTAGTACTTCTAAGGATACAGGagttaaagAAGTATCCGTATACATGTCGCCTCTTCCTAGTACTTCTAAGGATACAGgagttaggGAATTATTTGTACCCGTATTGTCTCCTCCTGGTACTTCTAAGGATACAGCagTTATCATTGAGAATTCAGATTCAATAATAGAAGAAGAGGAAGAAGAAGTTGTGGAAGGGCATATAATGCAAgATACCATTGAATACGCGGATGAAATCTtagtgaaaacaaaatttgagAACGCCGATTACAAAGAAGgtGATGCTGAAAATTCTGATGACTCTGACGATTGTATTATAGATGATGATTTGGATTACAAATTGCACTACAAACCAGatGAGACTGAAAGTTCTGAAGAGTCTGTTATTGTAATTGATATTGATGATCACGCAATAGGGGCACTGAACGTACCAGatttttttagaaGTACAGGAGACGAGATCGTGATGGAACAAGATATAATACCGTATCCAACAGAAAGCCAAGTAGAAGaATGTGCACAGATTGAAGACACTCCTAGTGCAACTGCTAATAATCCGGGAATTACACGCACCGGcaagaataaaagaaatatcatgTCGTGCCCCTCAAGGCACATTACTTCAATAAAGGAAATTGTTTGCTGCAGTAATACTGACCTGAATGAGAAATGTAACGATTGCAATTTTtgtacgaaaataaaaattgtatcgtCAGCTGTGAAAGCACTAGAATCGTCGGGATTGAATTTATTACTCGCAGAGAACATAATCATTGAAAATCTTCGCACTGACCTCATTTATGAATTCGGAGAAAACCTCATTACCGACAGCgaattgaaagaaattatCGGGGCAGTTCGTGCTAAGCAACTTCATATTAATTCACAGCAGAATAGCCCACAGTCTATCACTCATACCTCCAGAGCCTCATCATCAGTGTCATCTGGTCAAAACAACCATCAAACTCGGTCAACTATAAATGCAAATGTTCAGAGTAGTACGTCAAATTCTTCCACGCCACGCAACGTACGCAAACCCTCAAAAAACTCAAAGGTCGAAATATCATTTGCGAAGGCCCAAGATAAGTCTCAGAAAACTGAAGTCACGCGTAAACAAGTTACCAGTTCTGAAAAGCGACAACGGCATGAGACCTGTAACCAAAATGCTGGCCCTTCCCGTGGCAATTCGCTCGGTCATCGGAGACGATCTACCTACAAATCGGCCTCCAAACTCCCTGGACCATCTTCTGGTTTAAGTTACGATTCATCTTCTAGTTCCGTTTGCTCCGTTTCTTCCAGTGACGATGAAGTCTTATCAAAGAAGAGGAAGTTGAACGAAAATCAAAATGTTGATCGACCAGAGATGTTGGAAGCTCCCGTTTTTAGACCGACGGAAGACGAATTTAAGGATCCCATGCAATATTTGGAATCGATATTGCCAAGCGCAGCAAAGTACGGATTATGCAAAGTCATCCCACCGGATACGTTCGACCCGCCTTGCATTCTGGATAACGACATCCGATTTGGTATAACATATCAGTACATAGCTCGTATGTACAAGCGCTGGGGCCCGGCCGCGAGAGAACTTTGCAACATTCGGGCGAATTTGATAACGCAAAAAGTACAATGTAATAGACCACCCTTGCTTGAGGGCCTTGAGGTAAACTTACCGAAACTGTTTAACGTCGTGCAGCGCTTAGGTGGAATGAAGAACGTATTCACTAAGAAGAAATGGAATAAGGTTGCTGAGGAGATGAGATACAAAAAACTGATAAACCCAGAAAAGAGGCTAGatcaaatttatgtaaaatttcttTTAGCGTACGATACGTTGACTTATCATGAGCGTAAGAGGCTGGTCAATCAAGTGAATCGTTTATGGAAAAAGCGTAACGAAAACATGCTACGACGAGCTATGAACCCGCTGCACAGACAGAAACGCATGTTGGCGGAGTCAGATTCCTCTTCCGACGAGGAGTATGCCCCAGAAGATGTACCAATTTATGAGGCTTTAAGCGAAACTGAAGACTGTGTTATCGCGGGCAGAAATATGACCTTGAAGATGTTCAAAAAGatCGCCAATACGGCTGTGAATATCAATATTGACACGCATACTTGCAGCCCTGAAAATGTTGAAAGGATATATTGGAAGCACGTTGAAACCGGCGAGGaccatgtgtgtgtgtatgcgGCCTCCATCGACACGGGCGTGGCTAACCTCGGGTTCCCAAACGATGAACAAGCATACAGAAATCATCCGTGGAATTTAAAGagGCTCAGTGAAAATCCACGCAATGTTCTTAGTTACCTTGGCCCAGTCGTGGGCATGACCGTGCCAACCCTCCATCTTGCAATGGTGTTCTCAACCAGCTGCTGGCATCGTGATCCGCATGGATTGCCTTGGATCGAATACATACACGAGGGTTCCGAGAAAATATGGTATGGAATCCCAGACGATCAAAGCGATAACTTTCGCAGTGCAGTGGAAACTCTGTGTCCCACATTCTGCCAAAATAAATCCATCTGGCTTCCATCGGACATAACAATGATACCACCGGAAGTGCTTCAGGAATATAATGTCTCCATGTGTCGTGCCACACAAAATCCGGGCGAGTTCATCATTGTCTGCCCCAAGGCTTACTCTTGTTCAATTGCCACTAATCTATCCGTTTCTGAGAGTGTTTATTTCGCTACAAAGTCCTGGATGGATAATTACGCCCAAGTATTTCAAGAGCTGCGTAATAGTTGCGAACCAGCTATGTTCTCCATCGAACAATTGTTACTCTCATTCACAAAGGACAGCCGAACTCCTCTTGATATGCTACACCAAATCTACCCTGTGTTgaatgaaattgtaaaaaaagaaCTACAAAATCGGCGTTCTATTAAAAGACTTGGTTTTAAGGGTAAAGATATTGAAGCGAAACCGCCTACTACGGGTGCCTGGAATGTTCGCGATCAAGACGAATGTGAGCTTTGTCGAGTTACGCTTTATCTCTCAaggGTCAGGGGTATGTTTGAAAAGAAATCGACTTTGTGTCTAGAACATGCATTAGCAATCTTGAAAAAGAATGTAAGACCAAAATTCTTGTTAGAGGTAGAGCACATTATGCCGTCTGAATCGTTGACACAAATTGTAGAAACTTTACAAAACCGGCTGAGTAAAACTTAG
Protein Sequence
MKRVHAQRKFAAGINIPNTRQTQQSGVDRRTETPPESRVFQIHTTPSSILDVVSFQGIHTHLQPIVVLKRLEDTASTSKANENGETQPSYQFRDRSKIKKSVRWEPCSDTGIYKKRKLNPNVYKKKSSYNIGALVKELSVPITPLPSTSKDTAVEEVSVHMSPLPSTSKDTGVEEVSVHMSPLPSTSKDTGVKEVSVYMSPLPSTSKDTGVRELFVPVLSPPGTSKDTAVIIENSDSIIEEEEEEVVEGHIMQDTIEYADEILVKTKFENADYKEGDAENSDDSDDCIIDDDLDYKLHYKPDETESSEESVIVIDIDDHAIGALNVPDFFRSTGDEIVMEQDIIPYPTESQVEECAQIEDTPSATANNPGITRTGKNKRNIMSCPSRHITSIKEIVCCSNTDLNEKCNDCNFCTKIKIVSSAVKALESSGLNLLLAENIIIENLRTDLIYEFGENLITDSELKEIIGAVRAKQLHINSQQNSPQSITHTSRASSSVSSGQNNHQTRSTINANVQSSTSNSSTPRNVRKPSKNSKVEISFAKAQDKSQKTEVTRKQVTSSEKRQRHETCNQNAGPSRGNSLGHRRRSTYKSASKLPGPSSGLSYDSSSSSVCSVSSSDDEVLSKKRKLNENQNVDRPEMLEAPVFRPTEDEFKDPMQYLESILPSAAKYGLCKVIPPDTFDPPCILDNDIRFGITYQYIARMYKRWGPAARELCNIRANLITQKVQCNRPPLLEGLEVNLPKLFNVVQRLGGMKNVFTKKKWNKVAEEMRYKKLINPEKRLDQIYVKFLLAYDTLTYHERKRLVNQVNRLWKKRNENMLRRAMNPLHRQKRMLAESDSSSDEEYAPEDVPIYEALSETEDCVIAGRNMTLKMFKKIANTAVNINIDTHTCSPENVERIYWKHVETGEDHVCVYAASIDTGVANLGFPNDEQAYRNHPWNLKRLSENPRNVLSYLGPVVGMTVPTLHLAMVFSTSCWHRDPHGLPWIEYIHEGSEKIWYGIPDDQSDNFRSAVETLCPTFCQNKSIWLPSDITMIPPEVLQEYNVSMCRATQNPGEFIIVCPKAYSCSIATNLSVSESVYFATKSWMDNYAQVFQELRNSCEPAMFSIEQLLLSFTKDSRTPLDMLHQIYPVLNEIVKKELQNRRSIKRLGFKGKDIEAKPPTTGAWNVRDQDECELCRVTLYLSRVRGMFEKKSTLCLEHALAILKKNVRPKFLLEVEHIMPSESLTQIVETLQNRLSKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-