Zhep011221.1
Basic Information
- Insect
- Zelleria hepariella
- Gene Symbol
- -
- Assembly
- GCA_949319315.1
- Location
- OX439385.1:345366-352716[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0069 0.38 11.7 0.8 2 21 269 288 268 289 0.94 2 11 0.73 40 5.3 0.2 2 23 850 873 849 873 0.90 3 11 0.35 19 6.3 0.2 1 20 931 950 931 952 0.93 4 11 0.95 52 5.0 1.9 1 23 976 999 976 999 0.75 5 11 0.00052 0.028 15.2 3.6 1 23 1004 1026 1004 1026 0.97 6 11 0.024 1.3 10.0 0.8 3 23 1033 1053 1032 1053 0.98 7 11 0.0022 0.12 13.3 0.4 1 23 1077 1100 1077 1100 0.97 8 11 0.00037 0.02 15.7 0.0 1 23 1145 1168 1145 1168 0.92 9 11 4.1 2.3e+02 3.0 1.6 3 23 1175 1195 1175 1195 0.96 10 11 0.13 7.3 7.7 0.7 2 23 1222 1243 1221 1243 0.95 11 11 0.019 1 10.4 0.4 2 23 1249 1270 1249 1270 0.97
Sequence Information
- Coding Sequence
- ATGGAGGGGAACTTACAACAGTATTGTCGCTTATGCGGTGAACAAAAATCGCTAGAGACACTCATCGACATTTCGAAAAACGAGAAGATATTCAACGACGTGTCGGTAAAACTATATTTCATAAACGCAGACTACGTGTGCCTCACCGAAGAGGGATTACCGACTACTATATGTGGTTTCTGCTATCAGACACTGGACAAAACTCACGGGTTCCTCACTACTGTGAAGAAAGTCCAACCTCTTCTTCGGATGATATTTACCAGGCCAAGTAAAGTGAAGGAAGAAAGTTTATCTGAACCAAATAGCCGATCTTGTACCCCTGATAGTCCACAGATGATTATAGACGAGGACACTACTGGAGAGACCACCTCAAATGAAGAAATACATCCTCCAGACAACAGGGAAACAATTATTAACAATCAACCTTTAGAATCTCCTTTGGACAACCATACAACAATAATAGAAGAGGACTCACATGCACCTGTagataatatcaatttagaaccaGTCATGGTCGATGagatagaaaaaaaatggagtcaaTTCATTTGGCTTTGCCCACACTGTGATATGGACTTTTTGTGTGCAGAAATGCTAAGACACCACTGCCGGACTGAACACAATGTCTGTGCAGGATATAAATGCACTGATTGTGAGGAAAAGATGGATGAGTATAAAATATTTGTGGAGCATGTGTGTGGGCATCATCCGAGTTTAAGATCAAGTTGTGAGTATTGCAATGCCTCTTTAGTCTGTGACCTGAAATCCAGAATTGAACATTTATCGAGGAAGCACTGCGGAGTGAAATGCAAGTATTGCACAAAAAGGTTTTACAGCATAAATCTGTTGTTGCAACATCTAAAGTCCTGGAAACCCACTTCTTACACGCCGCCGCAGAAGGGCGCAACAAATCAATCCAagGACACCAAAATTCAACCCTACCGAGAACATAAGTCGGCGTTCCGGAGCGCCAACAATCAACCAATTCTAAAATCACATCAAATCAATGTTGACGAAAAGACCTCTGTAGAGAAACAACACGAATCCGATAGTGTTGAGGCAGTAACTTTGGATTCTCCACCGGCAATCATCAACAATCAAGAAGAACCGAGCATAGCTTTGTGTAATATTGAAGCCACACCTGGATTGTCAAAAGCAATAAAAGTGGAATTGACAGAAAACAAAGAAAGTAACTCAGGAATGCATGAGAAACAAGAAAATTCTGTGCATGTACCTGAGAATGTAAGTGAATCAGTCACCACTATGTGTGGTGAGCAAGTAACGCCTGCATTTCCCAAAGACGAAGTTAAATTTGAACCTTCTGACAATGGAGCAATCAGCTTTGAACATTCCGAAAGTAAAGCTTTCTTGGAATCACATAAAAACCAGATCATAAACAAAACTGCTGGCTATCCGACTGGGCCACTGCATCACAATCAGCCTTCACCATCTGCTATGATAGATCTGACTCTTTTTGTTGATAGCCAAGACGAGATCGTAGAAACACAAGTGCTAGAACCAGATCAGATGCATGACATGAAGTTAGATGACGCGAGGGAAACAACTGTAGAATCACTAGCAAACCATCTTGGCACACCACTTGTAGAGAAGATGGCAGGATTACCAGAGACCTCATTACTACCAATGATCAAACCAGTTCGTACATataaaagaataagaaacaaTGACGTTGTTCCAACTCTCATTGTACCACTCAATAAACAAACTTCTAGTTTGGCTTCAAACAAACAGACTACAAGAAAACAACCTTATATACGGAACCGTATATCAGATCCGAATTCACTTCTAGTGCAAGGTAAAGAATTGCCGTTATTAGATACTACTAGTAGCCCATCCTCGGTCCACTTGCACTGCCCTGACTCATCAGAACCTGAATCGCAAGTACCGCAGTCTCAGAAAAGTGTCAAAACAAAGTTGTTCTTACGTATGAAATCTGAAGAAATTGAAAAACTGGTGCAGTCTCCGGATCACAAACTTTATGTCACTGTAAAGCTTTGTTTGCCAAGTCTGAGCCCAAGTTTAGTACAGTTGCTTGCGAGAGCAGCGTCGAGTCCTGGTCTTGATGATGCCGATACTATGGTTCTTAGAAGTTTGCTTTTGAGCGGAGAACAGATCTCGCCAGTGTTACGGATGGGCGAAGAGATACCAATCTCTAGACTGACGCCCGAAAACAGAGAAAGACTGCGCAAATTCATACCAAACCAGCTGACAGCGACAGATCACAAGCTTCAGTACCTGAATGTACCAGCCAGTTGTGTGCCGGAACATCTGTGGGAGAGGCTAAAGAAAACTATGGGGCTGTCTACAACTAGCCATCACCATCGACAGGAAAGGAAGAAGCCTACAACTGCGGCAGATTCAGCACTTGTAGACTTGACGCAGATAGAGACTATGGAAGAAGAAAGAGAATGGGAGCAAAGTCTCCAAATGCGGGAATTCGAGGAAATAACAGCTCGTGAACGCACAGCGAGAGTGTTGCCAAGGTTGACCGAGACAGTTGACAAATCGTGGACCGGATATCCGTGGTCTTGCAGCCTATGCAAAGAACTGGTATTCAGGAATTTAGCCGAACTGAGGGCGCACAGTAAGAATGAACACAATAAGTGTTTCACGATCAAATGCGCGGATTGCAACGAAGATATGGAGAGCTTTTCGGGCTTCGTCTCGCACGTGGGACTCCATCGGAGGTTTTTGCAacaatTCTGCCCATTTTGCAACCTTAAAGTTGAGAAGTCTAGCCGCGAAGGACACATAATGAACCACAAGCTGCATCAGTGTCTGAAATGTGGCGAAATCCTTGCGCACCAGCAAGCTTTACTAGATCACACCGACAAATACAATTCGGAAACAAGTAACGTCGCTACGAACAGTCAGGACGATGGGAAACATACTAGCAGCGCCTCGTTTAGATGTAAAAAGTGTGGTCGGTCGTCCTTTCAAAACTTTCGCACTCTTATGGAGCACGTCACCTCTCACAAAGACAAAGAACACATATGCGACATTTGCCATGTGAGGTATATGAAAAAGAGCAATCTGATATCGCACTTACGCACTCACTCTACCGAGTCCGGGGCATGTAATTTTTGCCCCATGGTATTAAAAAATAAGCATCAGTACGAAGAACATGTGTTGACGCACATCAAGAAATTGAAGAACATCAACTCGTGGAAAGCTGTAGAGATATCGGAGTCGcagaagttaaaaaaatacaactgcAACGTTTGCGAATTGTCCTACGAGTATAAAAGAGGTCTGAAATTACACATGGAGAAGATTCACAATGTCTTCAACAGAAAATGCAAGTTTTGCCCGACCATGTTGGCAATGACAACCAAAGAGGATTTTGATACGCATATGCTGACGCACGCGGAGTTGGTTGCAGAGAGAGAGCGGGCGCAACCAAAAGGCAAGTTTGTCTGTGACATTTGCAACGCTTCGTTAACCAATAAAGAAGGCCTCAGAAGGCACATGGTGGCCGTACACTCCTACGCGCCCATCGGTTGCGAGTTTTGCCTTCGGAGAAGTTTCACTGAGCGTGATTATTATAACCATATGCTAACACACAAGGAATTGCTCGCAGAACAAGGACAGACGGCTTCGGATAAAGTTAAGATGGTCTCCGCTCAGAAGGTAGATCTCATCAAGTGCTACATTTGCACAGCGCCATTTGTCCATATTGCCTCTTTTAGAAAACACTTCGCTTCGCACCCTAATGTGCACAGACAGTGCGAGATATGCCCCAATAAATATCAATCAAAGTTTGCCTATCAAAAGCATATGCTGGCACACGATAAAAATAAAGGAAATTACAAGGCGTATACAGAATGTTCATCTCTTTCTCAAGCGCCGACTAATGAACAAGCGTGTCCAACTGCAGTGGATGTACAACCTTCTGTAGAAAATTTACAACCTGTTGCAGAGAAAAAAGTCACAGAATAA
- Protein Sequence
- MEGNLQQYCRLCGEQKSLETLIDISKNEKIFNDVSVKLYFINADYVCLTEEGLPTTICGFCYQTLDKTHGFLTTVKKVQPLLRMIFTRPSKVKEESLSEPNSRSCTPDSPQMIIDEDTTGETTSNEEIHPPDNRETIINNQPLESPLDNHTTIIEEDSHAPVDNINLEPVMVDEIEKKWSQFIWLCPHCDMDFLCAEMLRHHCRTEHNVCAGYKCTDCEEKMDEYKIFVEHVCGHHPSLRSSCEYCNASLVCDLKSRIEHLSRKHCGVKCKYCTKRFYSINLLLQHLKSWKPTSYTPPQKGATNQSKDTKIQPYREHKSAFRSANNQPILKSHQINVDEKTSVEKQHESDSVEAVTLDSPPAIINNQEEPSIALCNIEATPGLSKAIKVELTENKESNSGMHEKQENSVHVPENVSESVTTMCGEQVTPAFPKDEVKFEPSDNGAISFEHSESKAFLESHKNQIINKTAGYPTGPLHHNQPSPSAMIDLTLFVDSQDEIVETQVLEPDQMHDMKLDDARETTVESLANHLGTPLVEKMAGLPETSLLPMIKPVRTYKRIRNNDVVPTLIVPLNKQTSSLASNKQTTRKQPYIRNRISDPNSLLVQGKELPLLDTTSSPSSVHLHCPDSSEPESQVPQSQKSVKTKLFLRMKSEEIEKLVQSPDHKLYVTVKLCLPSLSPSLVQLLARAASSPGLDDADTMVLRSLLLSGEQISPVLRMGEEIPISRLTPENRERLRKFIPNQLTATDHKLQYLNVPASCVPEHLWERLKKTMGLSTTSHHHRQERKKPTTAADSALVDLTQIETMEEEREWEQSLQMREFEEITARERTARVLPRLTETVDKSWTGYPWSCSLCKELVFRNLAELRAHSKNEHNKCFTIKCADCNEDMESFSGFVSHVGLHRRFLQQFCPFCNLKVEKSSREGHIMNHKLHQCLKCGEILAHQQALLDHTDKYNSETSNVATNSQDDGKHTSSASFRCKKCGRSSFQNFRTLMEHVTSHKDKEHICDICHVRYMKKSNLISHLRTHSTESGACNFCPMVLKNKHQYEEHVLTHIKKLKNINSWKAVEISESQKLKKYNCNVCELSYEYKRGLKLHMEKIHNVFNRKCKFCPTMLAMTTKEDFDTHMLTHAELVAERERAQPKGKFVCDICNASLTNKEGLRRHMVAVHSYAPIGCEFCLRRSFTERDYYNHMLTHKELLAEQGQTASDKVKMVSAQKVDLIKCYICTAPFVHIASFRKHFASHPNVHRQCEICPNKYQSKFAYQKHMLAHDKNKGNYKAYTECSSLSQAPTNEQACPTAVDVQPSVENLQPVAEKKVTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -