Zhep010054.1
Basic Information
- Insect
- Zelleria hepariella
- Gene Symbol
- -
- Assembly
- GCA_949319315.1
- Location
- OX439384.1:1129590-1155665[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.91 50 5.0 3.0 1 23 156 177 156 177 0.97 2 23 0.0042 0.23 12.4 0.8 1 23 183 206 183 206 0.98 3 23 0.035 1.9 9.5 1.0 2 23 212 234 211 234 0.96 4 23 0.011 0.63 11.0 2.6 1 23 250 273 250 273 0.96 5 23 0.49 27 5.9 4.9 1 23 279 302 279 302 0.97 6 23 0.078 4.3 8.4 1.4 1 23 316 338 316 338 0.98 7 23 1.2 64 4.7 4.0 2 23 343 365 342 365 0.94 8 23 1.7 91 4.2 0.6 1 23 401 423 401 423 0.97 9 23 0.13 6.9 7.7 2.6 1 23 429 452 429 452 0.97 10 23 0.00092 0.05 14.5 1.1 1 23 514 536 514 536 0.97 11 23 0.061 3.3 8.7 6.1 1 23 542 565 542 565 0.95 12 23 0.0022 0.12 13.3 2.7 1 23 579 601 579 601 0.96 13 23 0.099 5.4 8.1 0.7 1 23 641 664 641 664 0.97 14 23 0.66 36 5.5 4.3 1 23 809 832 809 832 0.96 15 23 0.042 2.3 9.2 0.9 1 22 839 860 839 860 0.95 16 23 0.00067 0.037 14.9 3.6 1 23 892 914 892 914 0.98 17 23 0.05 2.7 9.0 1.1 1 23 919 941 919 941 0.97 18 23 0.027 1.5 9.9 1.2 1 23 947 970 947 970 0.95 19 23 0.0019 0.11 13.4 0.2 1 23 1080 1102 1080 1102 0.98 20 23 0.25 13 6.8 1.6 1 23 1122 1145 1122 1145 0.93 21 23 0.1 5.7 8.0 1.3 1 23 1169 1192 1169 1192 0.94 22 23 8.2 4.5e+02 2.0 2.1 1 20 1207 1226 1207 1230 0.78 23 23 0.48 26 5.9 4.2 2 23 1247 1269 1246 1269 0.93
Sequence Information
- Coding Sequence
- ATGTCCGAAGCGGAAGAGGACCCGGCCTTCGCCCGTGTGTGGGTGAAGGACGAGCCGGACGAGAGCCCGGAGCAGGCTTCTGAGGACTCCCTCGCTGCCGACGGTGCCTCGGAGCAGGTGCCCGTGGACTTCCTGGCTGCCGACGGTGCGGTGGAGCAGGTGCCGGTGGACTTCCTGGCTGCCGACAGCGGCAAGGaggatgacgatgacgatgacatGGGGTCCGGCGGGGAGATCGACCCCATGAGCGTTGTGAAGAGTGAGACCATGTTTGAAGACGCTCGTGAAGATGATGGTGATGGAGAGCCGGCCGAGTCGCTGTTCAATATCGTCGATTCTAAGGACGTTTTGAAGAAAGTGAAGAAAGAGAAGATGGATTCTGATGCAGAGGAGTCTGAGGATAACTCCAGGGACAGCCAATGGGTACCACTCACCCAACCTGTGAAAACTAAAAAGGGGAACAAGTATCAATGTCCGTACTGCAGCTATAAGGCCAAGATGCACGTCCTAAAGAACCACATACGCAAGCACACCGACACAAAGGATTTCAAGTGTCCGTTCTGCGATTTCATGACGAATTACGACGCGGCGCTGCGGCGGCATCTCAAGTCAATGCACGGCGACAGGGAGTTGAAGTGTCCGTTCTGCGATTGTATGACGATTTATGACGCGGCGCTGCGGCGGCATCTCAAGTCAATGCACGGCGATAGCGATGAAGAGAAGCCGAAGAAGACGTACATCAAGAAGTACCGGTGCCAGCTCTGTCCGTACATCACGGCTCACCGGCACGGCCTGAGGAGTCACATGCAGGGCAAGCACACAGACCAAAAGAACTACAAATGCGCTTTCTGTACGTACGAGACCAAGTACTCGACCGCGCTGCACCGCCATCGGTTCACACAGCACAAAGAGGAGGTCCTAAAACTGGGCGAAGCGTCGCGCGAGTACAAATGCGACCAGTGTGACTTCACAGTCCTCATGAAGAGCGAGCTGCGCCAACACGAGAAAAAACACTTGCTCAAGAACAAGTGTCATTTGTGCCGATTTAAATGTGAGACCGAGGAGGAGCTGCAGCTGCATTTGAACGATAGCCACTTGAATAAGGACGGGAAAGTGGTGAAGAATGAGAAGCCTAAGAAGCCCTCCGTCAAAAAAGAAAAGGGCATCAACCAAGTGGTCGGCAGCAGTACGGACCCCATATTCAAATGCCGGATTTGCGAACACGAAGCTGTGACCTACGTGGCTTTTCTCGACCACGTCAAGAGCCATGAGAAAGTCGATCCTTACAAGTGTAATGTGTGCGGATATGAAACCACGTGCAACGCGACGTTCCTCAAACATCTTCAGATGAACCACGGGGTTACCGACGATGGGATAAATGACATAAAGGTGATAAGTGAGGGGATCATGAGCGCCATGCAAGCGATTTCTATGGGTGTGGCGGCGGACTCTGACGACGAGCCGTTGGCCTCGCACCAGTTTGACGACGACGACGATGCCCCTCCGAAAGCCAAGAAGAAACGCACTCACAACAAAACCTTTTCCTGCTCACTTTGCGACTACACCACCAAGTACAAAGTGGCCTTGAAATCCCACATGGGACGGCACACGGACGAAAAACCCCATAAATGCCACTTGTGCGACTATTCCACTAAATACCCAACGTCTATGAGACGGCACAAGATGCTAAAACACGCGGGAGACGACCCTGACTGCAAAGGCAAGCCTACAGAGTACCTCTGCTCAGAATGCAGCTACAAaacgtactacaaaaacaatctaAACCTCCACATGCGAAAACATAACTCCGACAAACAGTATAAATGTGAATGTTGCTCATTTGGCACCGTTTATCGCACGGCCTTCTTGCGACACGCGAAGATACACAAGCGGAAGCTCCCAAACGGTCAAGCCATTCAGTACCAGTGCGAAATGTGCCCCTATTCCACTCAGTACGAAGGCCGGTTCTCGTGGCACATGCTAAAGACGCACAACAAGAGGGGAACCCTCGAGAAGGGAGTGAAGTGTGATTTCTGCGACTTTGAAACCAACGCCAGCTTGAAGTTCCGTCTCACAGCCCACTTGCAACGCAGCAAGCAACCGACACCGATGAAATGCCTGCACTGCGACTTCGAAACTTTCTACAAGTGCGAAGTGAAATACCACAGGAAGTCGCACTACCCTGAAATCTATACAAAGATCAAGATAATAGACCCTGTACAACCAGTCGCTAAGACAGAGGATAGTGTGACAGAGAGTTTACCCGCAGAAGCTCCGGAGAATCTAACCACCAACCATATTTATACGAGCGGGCCGAACAGTTTCTTCGCTCGGTACAAAGATGAGATACCCAACTATGAAGTCGAGTCCTCAATAGCGTGGAAGAAAATACCGGTGCTGGAAAACCGGGCTCTGAGCAAACCGTTCAGTTGCTACAAGTGCACCTATGCGTCGCGGTTTAAATCCTCGGTCCAGAGGCATTTTCAACGGTTTCACGGGaacaagGCGAAGCCATACCGTTGCAGCCACTGCGATTTCGGGACCTCAACTAAAGACTCCATAGCTCTCCACACGCGGCGAAGCAAGCAAGATACCGTCATGACGTGCGACTGCGGCCAGTTCTCCACAATCTACAAATGTGAGTTAGTGATCCATCAAAAACTACACAACCCTTACCGTTGCAGCAAATGCACGTACTCGTCCAAATCCAAGTACGATTTGGAACGGCATTACACCATGCATAGCAACAAAGGCTACAAGTGCAGGTTCTGCAGCTATGTGGGCACGAGGAGAGACACTCTTTTGACACACGAAGTCACGCATACTGGTGTCAGACCGTATCAGTGTCACTTGTGCCCGTACGGGTCCATACGCTTGCGTTTCCTTGAGAAACACATTATTCAGAAACACGAGGGGGATAACACAAGGACCAAACCGTTTCAATGCCACGCGTGCCCGTATGGCTCCTTCAGCCAAGTAATTTTGGACAAGCACATCGCTCAAAATCACTCGGACACCAACGTTGAAATGACGGAGAGCTGCAACGTTGAAATCAATGACGGTAGTGGTGGTGTTTCTGTGGATGATAATGTTGAGCCAGAAACTTCCAACACGAATTACTACGACGATTCAACGACGAACGAAGCGGTGGCCATAGTTGAAATTGAAATGGTACCGCAGAACCACAGCGGAGTCTCAACGGTCAACGAGAAGCAAACAGAGAAAGGTGTGAAGCCGTTTCAATGCCCCGTTTGTCCGTACAGTGCATTCAGCCCTAAAGTTCTGAAGAAACACATGACGATTCACTCTGAAATCCCCATACCAAATATCGGAGAGACCGTAGAGAAGACCGGTATAAAACCATTCCAATGCCACATGTGTCCGTACAGCTCGTTCCGCCCAAACATTTTGAAGAACCACCTCATTCTCAAGCACTCAGTCACACCGCAAGAACTGAATCTCACGTTCGTAGAAGAATACAATAATACACCGACCGAGAAAACGTACCAATGTCACATTTGCTCCTACAGCTCGATGAGTCTCAACGTTCTAAACAAACACTTGGCCTTGAAGCATGATAGCAAAGCTGCGACGGCCACTGAGAATACGGTCAAGACGTTCCAATGCCACCATTGCCCGTTCAACTCGTTGAGTCCTAACGTTCTGAAGAAACATGTCGTGCAAACCCACTCCGGTTTAGATGTGTCCGTGTTAAACGAAGGGGCTGTCAAACCGTGTCGGTGTCACTTGTGTCCGTACAGCACGTTTAGTCCCAAAGTGTTGAATAAACATCTGCTTCAGAGACATCCCGGTGCATCGAGGGGAACGTTCGAAAGTTATACCGATAACTCTGTTGAGATGATAAGTGTTGTGTCAGAAAATGATTGA
- Protein Sequence
- MSEAEEDPAFARVWVKDEPDESPEQASEDSLAADGASEQVPVDFLAADGAVEQVPVDFLAADSGKEDDDDDDMGSGGEIDPMSVVKSETMFEDAREDDGDGEPAESLFNIVDSKDVLKKVKKEKMDSDAEESEDNSRDSQWVPLTQPVKTKKGNKYQCPYCSYKAKMHVLKNHIRKHTDTKDFKCPFCDFMTNYDAALRRHLKSMHGDRELKCPFCDCMTIYDAALRRHLKSMHGDSDEEKPKKTYIKKYRCQLCPYITAHRHGLRSHMQGKHTDQKNYKCAFCTYETKYSTALHRHRFTQHKEEVLKLGEASREYKCDQCDFTVLMKSELRQHEKKHLLKNKCHLCRFKCETEEELQLHLNDSHLNKDGKVVKNEKPKKPSVKKEKGINQVVGSSTDPIFKCRICEHEAVTYVAFLDHVKSHEKVDPYKCNVCGYETTCNATFLKHLQMNHGVTDDGINDIKVISEGIMSAMQAISMGVAADSDDEPLASHQFDDDDDAPPKAKKKRTHNKTFSCSLCDYTTKYKVALKSHMGRHTDEKPHKCHLCDYSTKYPTSMRRHKMLKHAGDDPDCKGKPTEYLCSECSYKTYYKNNLNLHMRKHNSDKQYKCECCSFGTVYRTAFLRHAKIHKRKLPNGQAIQYQCEMCPYSTQYEGRFSWHMLKTHNKRGTLEKGVKCDFCDFETNASLKFRLTAHLQRSKQPTPMKCLHCDFETFYKCEVKYHRKSHYPEIYTKIKIIDPVQPVAKTEDSVTESLPAEAPENLTTNHIYTSGPNSFFARYKDEIPNYEVESSIAWKKIPVLENRALSKPFSCYKCTYASRFKSSVQRHFQRFHGNKAKPYRCSHCDFGTSTKDSIALHTRRSKQDTVMTCDCGQFSTIYKCELVIHQKLHNPYRCSKCTYSSKSKYDLERHYTMHSNKGYKCRFCSYVGTRRDTLLTHEVTHTGVRPYQCHLCPYGSIRLRFLEKHIIQKHEGDNTRTKPFQCHACPYGSFSQVILDKHIAQNHSDTNVEMTESCNVEINDGSGGVSVDDNVEPETSNTNYYDDSTTNEAVAIVEIEMVPQNHSGVSTVNEKQTEKGVKPFQCPVCPYSAFSPKVLKKHMTIHSEIPIPNIGETVEKTGIKPFQCHMCPYSSFRPNILKNHLILKHSVTPQELNLTFVEEYNNTPTEKTYQCHICSYSSMSLNVLNKHLALKHDSKAATATENTVKTFQCHHCPFNSLSPNVLKKHVVQTHSGLDVSVLNEGAVKPCRCHLCPYSTFSPKVLNKHLLQRHPGASRGTFESYTDNSVEMISVVSEND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -