Basic Information

Insect: Zelleria hepariella
Gene Symbol: -
Assembly: GCA_949319315.1
Location: OX439379.1:33095760-33101929[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.48 26 5.9 0.5 1 23 252 274 252 274 0.98

2 10 0.059 3.2 8.8 1.5 1 23 278 301 278 301 0.89

3 10 4.5 2.5e+02 2.8 4.5 1 23 310 332 310 332 0.97

4 10 0.0003 0.017 16.0 0.4 2 23 337 359 337 359 0.97

5 10 0.0051 0.28 12.1 0.1 1 23 366 389 366 389 0.86

6 10 0.058 3.2 8.8 1.4 3 22 399 418 398 422 0.93

7 10 0.00014 0.0075 17.1 1.5 1 23 430 453 430 453 0.94

8 10 9.2e-06 0.00051 20.8 1.9 1 23 459 483 459 483 0.97

9 10 0.013 0.72 10.8 1.9 3 23 494 514 493 514 0.97

10 10 0.00053 0.029 15.2 1.4 2 23 521 543 520 543 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.48	26	5.9	0.5	1	23	252	274	252	274	0.98
2	10	0.059	3.2	8.8	1.5	1	23	278	301	278	301	0.89
3	10	4.5	2.5e+02	2.8	4.5	1	23	310	332	310	332	0.97
4	10	0.0003	0.017	16.0	0.4	2	23	337	359	337	359	0.97
5	10	0.0051	0.28	12.1	0.1	1	23	366	389	366	389	0.86
6	10	0.058	3.2	8.8	1.4	3	22	399	418	398	422	0.93
7	10	0.00014	0.0075	17.1	1.5	1	23	430	453	430	453	0.94
8	10	9.2e-06	0.00051	20.8	1.9	1	23	459	483	459	483	0.97
9	10	0.013	0.72	10.8	1.9	3	23	494	514	493	514	0.97
10	10	0.00053	0.029	15.2	1.4	2	23	521	543	520	543	0.95

Sequence Information

Coding Sequence: atggcccggtttctatACCTGAACCTGCAGAACGTTACGCAGAAAATGACACACATTTGCATTTGCTGTCTTGACAGAGGAACGGAAATGATTAACTTGGATTCGTGTAAACACTCGGGATTTTTGCTCTACTACATAAAAGTTAAGATAGAGCCTGATGAGCACCTGGTGTGCCAACAGTGTCACGCCATGTTGCagaaaattgacaaattcaGACTGCAAGTGGAAGAGACCTTGCATATCCTGAGCACACAGGTCCAAAATGTGCTCGAGGCTGGAAAAAAACGTATTAATCTTCAAATACAACCCACACATATTATAGATTCAACCCTACCCTTAGTTCCGCAGCTTCAAGACATTCGCGAAGAACAAAAGGAATTTGAAGTAAAAGTAGAGAGTGACCACCATTTTTCTGGATCTGAATCTGATTTACCTCTGCATAAAATCAAGGAAGAAAATAATGACACAAAAACAGACGTTGACGAGCAAAAGTCCGTCAAAAGGAAAGGGAAGAagcgaaatttaaaaaaacaaataaaaagagcTCCAAATATAAAAACGCGAGACAGTTACGATGGTTTGTTCAAACTTATACATCTGAGCGAAAACGAAATCAAGGAAGAGAGATTAAAGTTGGCAGAAGACGAAAGTTTTTTGAAATTGCCTTACAAATGTAGCAGCTGTATTGTTGGCTTCGATTATGAGACGAATCTTGACGAACACAATGAGAAAAAACATAACTCTAAAAATGGCTTTAAATGTCAGACTTGCTTGTCTGTATTGGGAACAGAGGCCTCATACAAAGATCATGTTAGAAGACATGCCACAAGATACGAGTGCCTGAAGTGCGGCAAGCGCGTGGTGACGCTCGAGAGCGTGCGCAACCACTGCCGCGAGCGACACGGGATCGACATCCGCTCGAGGCTCTTCAGCTGCCAGCACTGCGCCTTCACCACCAATCGATCGCGCGTCTACCGCTACCACCTCGACAAACACAAGGAGAAGCCGCAGTGCACCGAGTGCGGCAGGACCTTCATCAACACCTCCATCCTCAAGAACCACGTGCTGACGGTGCACCGGCGGTCGGAGCGCATATTCGCGTGCGCGCCGTGCGGCAAGTCGTACGCCTCGCGCTCCGGCCTCAGCGCGCATCAGGCTGACTACCACAAGGACACCAAGGACCAGCGAGCGTTCTGCGAGCGGTGCGGCTCGTGGTTCAAGTCGCGGCGCAACCTCGAGACGCACCTGCGGACCTCGCTCAAGCACCGCTCGCCCACCGACGACAAATTCAAGTGCTCCGAGTGCCCTAAGACGTTCCACATCAGGTCTCAACTGGAGGAGCACATCAGCTTCGTGCACCTCAAGGAGACCAAGTTCAAGTGCGAGCTGTGCGGGAACAAGTCATTCCGCAACCGGTCGCAGTTGAGGAAGCACACCAAGATTGTGCACGAGAAGAACGCGCGACCGCGCGACAAGATATGCGACTACTGCGGCCGCGGCTTCACCTGCAACACGATCCTGCGGACGCACATTCGGACGCACACGGGCGAGCGACCGCTGCGCTGCGAGCACTGCTCCGCGACCTTCGCGCACCCCGGGGCACTGTTCACACACACCAGACTGCTCCACGCTGACAAGAAGACTGTCACACACTGA
Protein Sequence: MARFLYLNLQNVTQKMTHICICCLDRGTEMINLDSCKHSGFLLYYIKVKIEPDEHLVCQQCHAMLQKIDKFRLQVEETLHILSTQVQNVLEAGKKRINLQIQPTHIIDSTLPLVPQLQDIREEQKEFEVKVESDHHFSGSESDLPLHKIKEENNDTKTDVDEQKSVKRKGKKRNLKKQIKRAPNIKTRDSYDGLFKLIHLSENEIKEERLKLAEDESFLKLPYKCSSCIVGFDYETNLDEHNEKKHNSKNGFKCQTCLSVLGTEASYKDHVRRHATRYECLKCGKRVVTLESVRNHCRERHGIDIRSRLFSCQHCAFTTNRSRVYRYHLDKHKEKPQCTECGRTFINTSILKNHVLTVHRRSERIFACAPCGKSYASRSGLSAHQADYHKDTKDQRAFCERCGSWFKSRRNLETHLRTSLKHRSPTDDKFKCSECPKTFHIRSQLEEHISFVHLKETKFKCELCGNKSFRNRSQLRKHTKIVHEKNARPRDKICDYCGRGFTCNTILRTHIRTHTGERPLRCEHCSATFAHPGALFTHTRLLHADKKTVTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -