Basic Information

Insect: Zelleria hepariella
Gene Symbol: -
Assembly: GCA_949319315.1
Location: OX439384.1:2152173-2156243[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00011 0.0063 17.3 0.3 1 23 6 29 6 29 0.91

2 14 0.067 3.7 8.6 0.7 1 21 34 54 34 57 0.89

3 14 0.37 20 6.3 1.8 1 23 64 87 59 87 0.96

4 14 0.0054 0.29 12.1 0.5 2 23 94 116 93 116 0.95

5 14 0.022 1.2 10.1 7.6 1 23 123 146 123 146 0.95

6 14 0.011 0.58 11.1 2.0 2 23 175 197 174 197 0.94

7 14 4.8 2.6e+02 2.8 1.5 1 23 203 227 203 227 0.85

8 14 0.021 1.2 10.2 2.3 1 23 392 415 392 415 0.96

9 14 0.00049 0.027 15.3 0.9 1 23 460 483 460 483 0.95

10 14 9.4e-06 0.00051 20.7 0.4 1 23 499 521 499 521 0.98

11 14 6e-05 0.0033 18.2 3.3 1 23 546 569 546 569 0.98

12 14 0.00043 0.023 15.5 0.8 2 23 575 597 574 597 0.95

13 14 0.00074 0.041 14.8 1.0 1 23 640 663 640 663 0.94

14 14 0.0069 0.38 11.7 0.6 1 23 670 693 670 693 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00011	0.0063	17.3	0.3	1	23	6	29	6	29	0.91
2	14	0.067	3.7	8.6	0.7	1	21	34	54	34	57	0.89
3	14	0.37	20	6.3	1.8	1	23	64	87	59	87	0.96
4	14	0.0054	0.29	12.1	0.5	2	23	94	116	93	116	0.95
5	14	0.022	1.2	10.1	7.6	1	23	123	146	123	146	0.95
6	14	0.011	0.58	11.1	2.0	2	23	175	197	174	197	0.94
7	14	4.8	2.6e+02	2.8	1.5	1	23	203	227	203	227	0.85
8	14	0.021	1.2	10.2	2.3	1	23	392	415	392	415	0.96
9	14	0.00049	0.027	15.3	0.9	1	23	460	483	460	483	0.95
10	14	9.4e-06	0.00051	20.7	0.4	1	23	499	521	499	521	0.98
11	14	6e-05	0.0033	18.2	3.3	1	23	546	569	546	569	0.98
12	14	0.00043	0.023	15.5	0.8	2	23	575	597	574	597	0.95
13	14	0.00074	0.041	14.8	1.0	1	23	640	663	640	663	0.94
14	14	0.0069	0.38	11.7	0.6	1	23	670	693	670	693	0.97

Sequence Information

Coding Sequence: ATGGCGGACGAAGAATTTCCATGCAAATATTGCGAAGAGACTTTCAAGACGCAAACAGATTGGAAAGCACACGTATCGGACGCCCATGACGTCACGGGGTACCCATGCGACCTATGTACAGAGGTATTTTACAAAGAGCATGATTACATACAACACTTTGACGCGGAGCACAAATCTGACTTCAATCGTCACGTTTGCTCGCAATGCGGTGTCTCATACAAGTGGTTCAAGTTTCTAGCACAGCATATACAGAAGAAACATAAAATTGAGACAATGAAGCAATGTGAGCGCTGCGGAGAGGAGTTCTACAACTCCTTGGCGTACCGAGCTCATCTAAAGTTGAAGCATGTGTCCGGTAAAAAGTTTCACAAGTGCCAAAAGTGCCACCGTAGCTTTACAGCTAAAACTTTCCTGCAAATGCATCAGAAGTTTGACCACAGCAAAAAAGGCCCGAAATTGTTCAAAGAATACGTGCTGTATAATTTGAACTTGAGCGATCAATCTCTTCTTGACAGTACAAAGAAGTGTTTGGAGTGCGATTTGCAATTTAGCAGCTCCATATACTTGTTCAAGCATTTCAAGCAAACGCATAATAAAAAGAAGTACTACCAGTGTTGTGAATGCAATGAGGCCATCTATAATACTAGAGCAGGCCTAAGTATCCATTTACACTACGAGCATGGTATAGCCCGCGAGCATAAATGTGCAAAATGTGTGACTGGCCATCTGACTCCCCCTAAGACtgaacaaaaaagaaaagaagaaccAATCACGAAAGAGGTACCAAGCCAAAGTAAGCGGGCGCCTTGGTCGGACAAGTTTAAAAGCAATGATTTACCGAATAATCTAGACTTGACTGAAGCGAGTGAAGTAGAGATTACTAACCTAAGAAGTAATATAAGGAACCTATTTCAATTGCTATCGACAGTTCCGCCGTCCAAGTTGAGGGCTTCGCAAAAGACTGATGCAAAAACTCATACATTTTTTACAATGAAGAATTTTAAATCAGATGGTTTTAGTCAAGATGGAAGGCTGAGATATGAAGTAAAGCCAAGAGATGAAAACAAAATACGTAACCGCGCAAAAGGAGAAGCAGTAAAAGAACGAAGTTCCTTTGCTGCGGAGGCGAGTGTCAATAATGTAAAACAGGAATCGAGACAAAATCAAACTCAGTTCCCGTGTTACAAATGTAAAGATAAATTTACATCGCGCACAGCACTGAAGTTACATTTACTGAAAAAGCACGGATTCAAGGGGTTTCCAAGCAACTGTCATAAAAGCGTGAGAGAACGCGAGATACTAAACAGAAAATGCGAAGAAAATTCAGTAAATGAACCAAAGTTGTCCAAAGATAGCGAAAAGAATGTCACTCCCAAGTACAAGTGTAATAGCTGCAACTATAAATTCGAGGAACAAGAACTTTTGCTCAAGCATATGACCGAAGAACATGGGCAGGGCGCAAATATCGAAGAAAACCCAGAaaacaaagaagttttcaaaTGCCCCGATTGCTACAAAGCATTCGATTCTGAAACCGAACTTAGTACCCACATGAATGAGCACACAAAACAGGACGAGAATGTGaaaaaagtctgctgcaaatgCAATGAGCACAAGAAGAAAACCAAGTCCATTTACAAATGCCTGAAGTGCGATAAGAAATTCAAAATACGCAGCGTCCTACGTCGCCATATAAAGAAGCAACACAGGGTGCCAATTTTGAAATGCCAAAAATGCAACGCCACCTTCAAAGTCGCGGAAAAGCTTGCTCAACACATGAAGCTAAAGCACAGCAGTCTGGAAACCGCGCTGCCCGTTATAAAGATTCAAAAGTCTAAACTCTCGCCGATCAAACTAGATAAACTCCCGAACATTCTCTCCAACATACTGTCGCGAAACCTTCTAAACGGTACTCTGCACAATTGTAAGATTTGCAACTCCTATTTTCCTTCAAATGAGCTGCTGCAAAGACACATTCAATGGGAGCATACCAAGAATGTGAATCTACATAAATGTGGACAATGCAATCAGGTACTCTACAGTGTTGAAGATTTGGAGCTTCACATGTCTACGTCACACAACAGCGAAGGTCCCAAAAAGTGGAAGAAGCAGATCGCTTTCAACTATGAGCATCAAACCGACCTATGA
Protein Sequence: MADEEFPCKYCEETFKTQTDWKAHVSDAHDVTGYPCDLCTEVFYKEHDYIQHFDAEHKSDFNRHVCSQCGVSYKWFKFLAQHIQKKHKIETMKQCERCGEEFYNSLAYRAHLKLKHVSGKKFHKCQKCHRSFTAKTFLQMHQKFDHSKKGPKLFKEYVLYNLNLSDQSLLDSTKKCLECDLQFSSSIYLFKHFKQTHNKKKYYQCCECNEAIYNTRAGLSIHLHYEHGIAREHKCAKCVTGHLTPPKTEQKRKEEPITKEVPSQSKRAPWSDKFKSNDLPNNLDLTEASEVEITNLRSNIRNLFQLLSTVPPSKLRASQKTDAKTHTFFTMKNFKSDGFSQDGRLRYEVKPRDENKIRNRAKGEAVKERSSFAAEASVNNVKQESRQNQTQFPCYKCKDKFTSRTALKLHLLKKHGFKGFPSNCHKSVREREILNRKCEENSVNEPKLSKDSEKNVTPKYKCNSCNYKFEEQELLLKHMTEEHGQGANIEENPENKEVFKCPDCYKAFDSETELSTHMNEHTKQDENVKKVCCKCNEHKKKTKSIYKCLKCDKKFKIRSVLRRHIKKQHRVPILKCQKCNATFKVAEKLAQHMKLKHSSLETALPVIKIQKSKLSPIKLDKLPNILSNILSRNLLNGTLHNCKICNSYFPSNELLQRHIQWEHTKNVNLHKCGQCNQVLYSVEDLELHMSTSHNSEGPKKWKKQIAFNYEHQTDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -