Basic Information

Insect: Zelleria hepariella
Gene Symbol: -
Assembly: GCA_949319315.1
Location: OX439395.1:2420561-2432361[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 9.9 5.4e+02 1.8 0.1 1 23 86 109 86 109 0.91

2 18 2 1.1e+02 4.0 0.2 3 23 114 134 112 134 0.96

3 18 0.14 7.6 7.6 0.2 2 23 138 160 137 160 0.90

4 18 1.3 69 4.6 0.3 2 23 392 414 391 414 0.95

5 18 0.083 4.5 8.3 0.2 1 21 422 442 422 443 0.94

6 18 0.12 6.4 7.8 0.3 2 23 453 474 452 474 0.92

7 18 5.1 2.8e+02 2.7 0.7 1 23 490 513 490 513 0.88

8 18 1.4 78 4.4 3.6 1 23 522 545 522 545 0.93

9 18 1.6 87 4.3 2.2 1 23 652 675 652 675 0.93

10 18 3.7e-05 0.002 18.9 0.8 1 23 681 703 681 703 0.96

11 18 9.1e-05 0.005 17.6 1.4 1 23 710 732 710 732 0.97

12 18 0.00011 0.0063 17.3 2.3 1 23 737 759 737 759 0.96

13 18 0.00046 0.025 15.4 3.6 1 23 765 787 765 787 0.99

14 18 6.1e-06 0.00033 21.3 2.3 1 23 793 815 793 815 0.98

15 18 0.0061 0.33 11.9 1.1 2 23 822 843 822 843 0.98

16 18 0.0082 0.45 11.5 0.7 3 23 853 874 853 874 0.98

17 18 0.00013 0.0069 17.2 0.5 1 23 879 901 879 901 0.97

18 18 4.6e-05 0.0025 18.6 3.0 1 23 907 930 907 930 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	9.9	5.4e+02	1.8	0.1	1	23	86	109	86	109	0.91
2	18	2	1.1e+02	4.0	0.2	3	23	114	134	112	134	0.96
3	18	0.14	7.6	7.6	0.2	2	23	138	160	137	160	0.90
4	18	1.3	69	4.6	0.3	2	23	392	414	391	414	0.95
5	18	0.083	4.5	8.3	0.2	1	21	422	442	422	443	0.94
6	18	0.12	6.4	7.8	0.3	2	23	453	474	452	474	0.92
7	18	5.1	2.8e+02	2.7	0.7	1	23	490	513	490	513	0.88
8	18	1.4	78	4.4	3.6	1	23	522	545	522	545	0.93
9	18	1.6	87	4.3	2.2	1	23	652	675	652	675	0.93
10	18	3.7e-05	0.002	18.9	0.8	1	23	681	703	681	703	0.96
11	18	9.1e-05	0.005	17.6	1.4	1	23	710	732	710	732	0.97
12	18	0.00011	0.0063	17.3	2.3	1	23	737	759	737	759	0.96
13	18	0.00046	0.025	15.4	3.6	1	23	765	787	765	787	0.99
14	18	6.1e-06	0.00033	21.3	2.3	1	23	793	815	793	815	0.98
15	18	0.0061	0.33	11.9	1.1	2	23	822	843	822	843	0.98
16	18	0.0082	0.45	11.5	0.7	3	23	853	874	853	874	0.98
17	18	0.00013	0.0069	17.2	0.5	1	23	879	901	879	901	0.97
18	18	4.6e-05	0.0025	18.6	3.0	1	23	907	930	907	930	0.98

Sequence Information

Coding Sequence: ATGTCTTCAGAGGATTCTGACGACGAACCATTAGCTATCCTAGCGTCATACAAAAAAGACCGACCAGCTGATTTTCCTGAACCCGAAGCCGAAAATGAAGTGAAAGTACCCAAAAAGCGAGTGAAAAAGAAGAATGTGGACAGTCCGCCGCCAAAAAAGATGAATTCTAGGCTGAGAGATTTAATTTCCCAATCTGTGATTCAAAGACCTCAGGATGTCTGGCTGTATGTTAAGGATTTTAATCATAACGGGCCTTACAGCTGCTTGTTATGCCCGGAATGGTTCATAAATAGAGGCAAGATCATTGTGCATTACATCTTGAATCATCAGAAAGATTTCTGTGGCATTTGCAGATATTTTGTACCTGACCGGGAAGCGTGGTATAACCATCAGAAGTTTCACACACCGTGGAAGTGCTCACAATGCGTTGAAGAGTTCGACACAGAAGCTGAGCTTCGGGAGCATTTTAGCGAAAAACACCAGCTCGTACACTGCCGCCTATGCCACTTCAGAATTCCTGATAACGAGGAATACAACTACCACTTGTTTGAAAAACACAGTGTCACAAATGTTGCAGCTAAAACCCTTGATCTTCTCTGGCAACCCGAGAGTGAAGGACAAAAGTACCTCTGTCTACTCTGTTCTAAATCCAACAACAATTCGACAAACTTCTGCAATCACTACATGAGCTACCATCACATAACTCTCAAGTGTTTCTCAAAGATGATTTCGGCACAGGACATAGAATTTAGACTCTACGGTGCCAATATTAGTGTCGATTTCCTGGAAAGCCAGTTGAAAGACCAGGACAAGTTTGGGTATGTAGACTTTGATATCAAACCACCTGCGGAGCATGATGTTGCCGTCCAACATCCAGAATCTGATGCTTTACTAGACGCACTTGTTcctgaaataaaacaagaacaTGTAAGCGATTCCGAAGATGCAATTGATGTAGTTAAGCAGAAAAGTAAAGAAGATTCAGACGAAAACGCCATCTGGAACACTTACCTTGGGACAGAAGACTTCGATATTACTTCAACTGAAATTATCATGCTTCAAACATGCTACTTTGattacattaatgaaattcaaaGCTCTTTAGACTCTAGAACAGTACCAGAGAATTCCAGTATAAACTATGAGATTACAAAATCCGAAAAAGCCGATATAACATGCCCAATATGTGCCTGCGAGTACAATGTCATAGCTGAATTTACGACGCACTTGTCACGAATGCATGGGGTCAAAATTGTACCGACTTATTTCTGCAGGGTATGTGCAACAACTTTTGACTCAATGATTGAACTGACAAATCACATGTCGAAGGAGCTGGGTGAATTTGAGGATCTCTGGATTTGTCAGTTTTGTGATAAGGAATTTGACAACAGGGAGGCCACTAGAGGGCACCTCACCCAGCATTGGCAGGAGATCGATTTGGACAACTGTTTCAGTCCACATCTGGGCTTCAAGTGCAGGTATTGCCCTACCTTGTTCTGGAATGAGACAGACAGGGAGGGGCACCAAAAAAGAGTGCACTCTAGCAAACATCGGGAGGATTTTTATGAGTGCGAAGATTGCTGCCAGTTGTTCAGCGATAAGGTGTGGTTCACGCACCACTACATCGAGAAGCACCTAAAGGAGAAAGCGGACCTGACGCACCTGTTCAAATGCTCCCTCTGCTCCCTGGTCCTGTCGACCAGCGTGGAAGGAATGCGGAAGCACTTTGCCGCGGAGCACGCTGACGCTAAGAAGATATTCTGCTCTCTCGGCTCCTGTACGCTCAAGCCCTTCGCGGCGAAGAAGTCGTTCAAAATACATTTGAAGTCGGTGCACAGGCCCAAGCCGAGCGACCAGGCGTCGAGCAAGGTGCACTGCCAACTCTGCGGACGCGAGTTCGAGTCCGCGCGAGCCTGCAGCTGCCACATGGCCCAGGTGCACGGCCCTGGACGGTTCAAGTGCAAGCTGTGCCATGTTTTCCTCAATACCGCCGATGAGAGGAAGCTTCACTACCTGCTCCAGCACCCGGGCCGGCACCCGTTCGAGTGTGTGACGTGCGGCAAGTCCTTCCCGTACAAGTCTTCGCTATACTCCCACCGGCTGGAACACAAGCCTGACAGACGGGCTTTCGTCTGCTCCTACTGCAACAAGTCTTTCATGAAAAAGGATTCGTACCGCGAGCACGTCCTAATCCACGAAGGGCCGCGCCACGCCTGCTCCTACTGTCCAATGCGCTTCGTACAGCGCTCCAACATGCTGCGACACGAGCGAAGACACACAGGGGAAAGACCGTACTCCTGCCACTACTGTCCGGCCAGCTTCAGCGATAAAGGAGCCTGTAGCTCGCACATGAGGACCCACGTGAAGGACGCGTCTTATCCGTGCATGTACTGCGGCCAGACGTTCGcgcagaagtccaaactcaagtaCCACACAAGGAAACATACGGGAGAGAATCTGGAGACGTGCCCCGTCTGTGCGAAGCTCTTCACAAGCGGTTGCTCCTTGCGGGAGCACATGAAGATACACAGCAAGAATAAGAACGCGAAAATCGGCTGCCCCTTGTGTAAAAAGTACTTCCCAGACGAACGCTTCATGATCCGCCACCTCCGCTCGACACACAATCAGGCCGGGTTCAACTGTCCCATCTGCAACAAGAAACTGTCAAGCTCGTTCGGCTTGAGACAACACGTCATCACCCACAGCAAGGTCAAGACTTTCAAGTGCAAGAAGTGCCCCAAATCGTTTGGCGTCAAGCGCTCCCTCCTCAAGCACCTCAAGCGACGCCACGACGTCGATCTCCATGGCAACGAAGATAACATCACGGACTACATGCAACTGTTAGACGTGAGGCAATGCCAGCTCGGCCTCGACGAAGAAATGCTCTGCATGATCTTTGGACCACCGAAGAATGAAGATGAAGCCGGGACAGTACACGATAGTAAACACAGTGAAAGCGATGAGGACAAGAGAACCGATGATGAGTCCAGTGATTCTGAGGATAATGACGGAGCGGAAAGAGGGCCTGTTAAGGTGAAGGTGGAAGTTAAGGCCGAGCCGCAGAGTGAGTCCGAGTCTGAGCCTGAGCCTGAAACGCAGCTGGAGCCCACTGATTTTGTGAGCGTCAAGATTGAGCCCGTCGATGAAGAAGAGGCTAGGGAGTCTCAGAAATGA
Protein Sequence: MSSEDSDDEPLAILASYKKDRPADFPEPEAENEVKVPKKRVKKKNVDSPPPKKMNSRLRDLISQSVIQRPQDVWLYVKDFNHNGPYSCLLCPEWFINRGKIIVHYILNHQKDFCGICRYFVPDREAWYNHQKFHTPWKCSQCVEEFDTEAELREHFSEKHQLVHCRLCHFRIPDNEEYNYHLFEKHSVTNVAAKTLDLLWQPESEGQKYLCLLCSKSNNNSTNFCNHYMSYHHITLKCFSKMISAQDIEFRLYGANISVDFLESQLKDQDKFGYVDFDIKPPAEHDVAVQHPESDALLDALVPEIKQEHVSDSEDAIDVVKQKSKEDSDENAIWNTYLGTEDFDITSTEIIMLQTCYFDYINEIQSSLDSRTVPENSSINYEITKSEKADITCPICACEYNVIAEFTTHLSRMHGVKIVPTYFCRVCATTFDSMIELTNHMSKELGEFEDLWICQFCDKEFDNREATRGHLTQHWQEIDLDNCFSPHLGFKCRYCPTLFWNETDREGHQKRVHSSKHREDFYECEDCCQLFSDKVWFTHHYIEKHLKEKADLTHLFKCSLCSLVLSTSVEGMRKHFAAEHADAKKIFCSLGSCTLKPFAAKKSFKIHLKSVHRPKPSDQASSKVHCQLCGREFESARACSCHMAQVHGPGRFKCKLCHVFLNTADERKLHYLLQHPGRHPFECVTCGKSFPYKSSLYSHRLEHKPDRRAFVCSYCNKSFMKKDSYREHVLIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYSCHYCPASFSDKGACSSHMRTHVKDASYPCMYCGQTFAQKSKLKYHTRKHTGENLETCPVCAKLFTSGCSLREHMKIHSKNKNAKIGCPLCKKYFPDERFMIRHLRSTHNQAGFNCPICNKKLSSSFGLRQHVITHSKVKTFKCKKCPKSFGVKRSLLKHLKRRHDVDLHGNEDNITDYMQLLDVRQCQLGLDEEMLCMIFGPPKNEDEAGTVHDSKHSESDEDKRTDDESSDSEDNDGAERGPVKVKVEVKAEPQSESESEPEPETQLEPTDFVSVKIEPVDEEEARESQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -