Basic Information

Insect: Zelleria hepariella
Gene Symbol: -
Assembly: GCA_949319315.1
Location: OX439385.1:19905154-19910687[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.8e-06 0.00021 22.0 1.7 1 23 213 235 213 235 0.98

2 9 3.6e-08 2e-06 28.3 1.6 3 23 243 263 241 263 0.98

3 9 0.00012 0.0067 17.2 0.3 1 23 269 291 269 291 0.98

4 9 1.9e-05 0.0011 19.7 1.6 1 23 297 319 297 319 0.99

5 9 2.7e-05 0.0015 19.3 1.7 2 23 424 445 423 445 0.96

6 9 2e-08 1.1e-06 29.1 2.5 1 23 451 473 451 473 0.98

7 9 0.003 0.16 12.9 0.6 3 23 481 501 479 501 0.97

8 9 7.6e-05 0.0041 17.9 1.5 1 23 507 529 507 529 0.99

9 9 0.023 1.3 10.0 0.8 1 23 535 559 535 559 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.8e-06	0.00021	22.0	1.7	1	23	213	235	213	235	0.98
2	9	3.6e-08	2e-06	28.3	1.6	3	23	243	263	241	263	0.98
3	9	0.00012	0.0067	17.2	0.3	1	23	269	291	269	291	0.98
4	9	1.9e-05	0.0011	19.7	1.6	1	23	297	319	297	319	0.99
5	9	2.7e-05	0.0015	19.3	1.7	2	23	424	445	423	445	0.96
6	9	2e-08	1.1e-06	29.1	2.5	1	23	451	473	451	473	0.98
7	9	0.003	0.16	12.9	0.6	3	23	481	501	479	501	0.97
8	9	7.6e-05	0.0041	17.9	1.5	1	23	507	529	507	529	0.99
9	9	0.023	1.3	10.0	0.8	1	23	535	559	535	559	0.95

Sequence Information

Coding Sequence: ATGTATTTTGCCGACACAACAGCGCCGTACGTGCTGTACAAAGATGGCGTCGAGCGCGCGCCCCCGGGGACGCAGTGGGGCGGGGGGGTCCTCGACACGGGGGGGTACCAGCCCATGCAGCACCAGAGCCCCGGTGGGCCCTCCCCCCAACCTGAACCACAGCTGGCCTCCCCCGCACCCTCCCCTTACCCACCACCCCCGCCGCCGCAAGACCAAGGCGCCACCGACGAGGCAGCCCAGCAACTCGCCCAGCAACAAGCCCAGCAGCAAGCTCAGCAACAAGCGCAGCAACAGCAGCAGCAACAAACCTCCCCAGAACACATGCAAGTGGAGCAACAGATACAGTCCCAGCCGCAACCCACGCAGGACCACATAGACCGAGCGCCCTGCTTCGTACCACAACCAGACTTGCAACAACAGTACGCGACACCGTACTTCAAAGAGACTCGACCCGCCAGCCATATGCTCGGCACCGGGGGCTTCCCGCTACACTACTTGAAGCAAAACGGAGGAGTACTGTCTTTAGAAGGCCCGCTAGACCAATACACGGCGCCTGAACTCCGCCACTTGCCGGACATCGTCCAACCGGAGCAACCCAAGCCGCGCAAGCACAACCCCAACTCGGAGTTAAGACTGTTTAAATGTCTGACGTGCGGCAAAGACTTCAAGCAGAAGTCGACGCTGCTGCAGCACGAGCGCATCCACACAGACTCGCGGCCGTACGGCTGCCCCGAGTGCGGCAAGCGGTTCCGGCAGCAGTCGCACCTCACGCAACACTTGCGCATCCACGCCAACGAGAAGCCCTACGCTTGCGTGTACTGCCCGCGCTCGTTCCGGCAGCGCGCCATCCTCAACCAGCACCTGCGCATCCATTCCGGTGAGAAGCCCTATTCGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAATCAGCACGTCCGCACACACCAAGACGTCTCGCCGCATCTGATCTTCAAGAACGGCACGGCGCCGACGCTGTGGCCTCAGGACGTGCCGTTCCCTGACGAGAACAAGGAGGAGATCATGTCCCAGTACGGAGACGGCGACGGCCAGACGCCCGAGCAGCGCGGCGCCTGCTTCTCGCCGGGCGACACCGCGCAGTACCCCGCCTACTTCAAGGATACCAAGGGGATGAACCACGGCGTCTTCAGCTCGGGACTGTCCTTCCAATACCTGAAGGGCGGTAAACTGCCAGACGTCCTGGGTGGCCGCACGCCCATCTCGATGCCTCTCTACGTGCGCTGTCCGATCTGCCAGAAAGAGTTCAAGCAGAAGTCGACGCTGCTCCAACACGGCTGCATTCACATAGAGTCGCGGCCGTACCCGTGCCAGGAGTGCGGTAAGCGATTTAGACAGCAGTCCCACTTGACGCAGCACCTCCGCATACACACGAACGAGAAGCCTTACGGCTGCGTGTACTGCCCGCGGTTCTTCCGACAGCGGACCATTCTGAACCAACACCTGAGGATCCACACGGGCGAGAAGCCTTATAAATGCACGCAGTGCGGCAAAGACTTCCGGCAGAAGGCGATCCTGGACCAGCACACGCGGACGCACCAGGGGGACCGGCCGTTCTGCTGCCCCATGCCTAATTGCCGGCGGCGGTTCGCCACTGAGCCGGAGGTGAAGAAGCACATTGACAACCACATGAACCCGCACGCGGCTAAGGCTAGACGCGCCGATACGAAGACGCCGCGGCCTCTGCCTCCGGCGTCGGCTGTCGTGAAACCAGAGCTCTATTTCCCGCAATGCTACGGGCCACCCTTCCAGCAGTTCCCGCCGTCATCCGTAGCTGAGTTCAAGCCTGCAGTAGGCCCGGGCGCGCCGGTGCCGTGCCTCCCAGTCCAGTGA
Protein Sequence: MYFADTTAPYVLYKDGVERAPPGTQWGGGVLDTGGYQPMQHQSPGGPSPQPEPQLASPAPSPYPPPPPPQDQGATDEAAQQLAQQQAQQQAQQQAQQQQQQQTSPEHMQVEQQIQSQPQPTQDHIDRAPCFVPQPDLQQQYATPYFKETRPASHMLGTGGFPLHYLKQNGGVLSLEGPLDQYTAPELRHLPDIVQPEQPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYSCGECGKHFRQKAILNQHVRTHQDVSPHLIFKNGTAPTLWPQDVPFPDENKEEIMSQYGDGDGQTPEQRGACFSPGDTAQYPAYFKDTKGMNHGVFSSGLSFQYLKGGKLPDVLGGRTPISMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCQECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKARRADTKTPRPLPPASAVVKPELYFPQCYGPPFQQFPPSSVAEFKPAVGPGAPVPCLPVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00358842;
90% Identity: iTF_00358842;
80% Identity: -