Basic Information

Insect: Zelleria hepariella
Gene Symbol: -
Assembly: GCA_949319315.1
Location: OX439385.1:1534939-1540513[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.018 1 10.4 1.9 1 23 123 146 123 146 0.97

2 12 1.6e-05 0.00085 20.0 1.8 1 23 257 280 257 280 0.97

3 12 0.038 2.1 9.4 5.7 1 23 294 316 294 316 0.99

4 12 0.003 0.16 12.9 0.8 1 23 324 347 324 347 0.93

5 12 0.00015 0.0082 16.9 0.4 2 23 354 375 353 375 0.97

6 12 0.00066 0.036 14.9 0.5 1 23 381 403 381 403 0.97

7 12 2.5e-05 0.0014 19.4 5.6 1 23 413 435 413 435 0.98

8 12 0.0022 0.12 13.3 3.1 1 23 441 463 441 463 0.98

9 12 6.1e-06 0.00034 21.3 0.2 1 23 469 491 469 491 0.98

10 12 1e-05 0.00056 20.6 0.2 1 23 497 519 497 519 0.99

11 12 1e-06 5.5e-05 23.8 0.7 1 23 525 547 525 547 0.99

12 12 1.6e-06 8.6e-05 23.2 2.2 1 23 553 575 553 575 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.018	1	10.4	1.9	1	23	123	146	123	146	0.97
2	12	1.6e-05	0.00085	20.0	1.8	1	23	257	280	257	280	0.97
3	12	0.038	2.1	9.4	5.7	1	23	294	316	294	316	0.99
4	12	0.003	0.16	12.9	0.8	1	23	324	347	324	347	0.93
5	12	0.00015	0.0082	16.9	0.4	2	23	354	375	353	375	0.97
6	12	0.00066	0.036	14.9	0.5	1	23	381	403	381	403	0.97
7	12	2.5e-05	0.0014	19.4	5.6	1	23	413	435	413	435	0.98
8	12	0.0022	0.12	13.3	3.1	1	23	441	463	441	463	0.98
9	12	6.1e-06	0.00034	21.3	0.2	1	23	469	491	469	491	0.98
10	12	1e-05	0.00056	20.6	0.2	1	23	497	519	497	519	0.99
11	12	1e-06	5.5e-05	23.8	0.7	1	23	525	547	525	547	0.99
12	12	1.6e-06	8.6e-05	23.2	2.2	1	23	553	575	553	575	0.98

Sequence Information

Coding Sequence: ATGGAGTCAAGTTTAGAAATTAATCCGGATAAAGTGTGCAGAACGTGCATGGCCGAGTCTGCCAACATGCGGCCCCTTTTTCACTTCGCAGGTGACGGTCGGCAGACGCTAAGTGAGGACCTATCTTTCGTCACAAATATGTTAATAAAACAGGAAGACAAGCTTCCCAAACAAATGTGCAACGACTGTGAGGTAATACTGCACCAGTCGAGCATGTTTAAGCGCCGCTGCATCGATTCTGAGGCCCGATTTCTCAGGCTACTTAACACTGTCAACATGGAAGAAATCGATACAGATATTACTGAGAAACCTTTACCGAAACTTGATAACTGCAACGAAACGCGCAGTTCCAACCGCGGACAACCTTACCAGTGCTCTATTTGCATTTTTAAGTTCTCAGACATACATAAATTGGAGTCCCACATTAAAAATATGCATTATAAACAGGAGAAGGAAGGATCTTTAACCGATGGCACCTTCCTTTCGGACTCAAAACACTGTGCTGATACTTTTCGTAGACCTACTACTGTTGCTAAAGATAGTGAGCAGTgtacaaaagaagaaatagaatATGAATCAATGGAATTCGTAGAAGACAATTCATCTTCGGAATCCATTGATAATTTTGAAGAGTGTGTTGACAACAGACATCATTTAAGCAAGTCAAGCCTTAAAGAAGCAACTGATTCACCGGTGAAGCCATCAGCTGTAGAAACGAGGCGCCACAATATCAAAAACAACTTGCGAAGGAACAGTGAAACTGAGACTTACGTTTGCGAGCACTGCAACTTAGTGCTAAAAACGAAGAGTAATTTACAAAATCACCTTATACGCAAACACAATAAAGGCCCCGAAAAAGAAAGAGAAGTTGAAAAGCGTTACAAATGCCCAGTCTGCATGTGTAAATTTGCGTATAAATGCTTTTTAGAAGTTCACATGAAACGTCATGAGAAGCCTACAGTTACCGCCTACATCTGTGCTGCTTGCAAACGGGATTTCAAGCGCCAAAGACATTTAGACAACCACATTATCTTAGTCCATTCGACGGAAAACGGACTCAAATGCGACTATTGCCCGAATAGCTTCGCAACACAAGAGAGCCTCGATCAGCACCAAACAATGCATCAGAATGAGAGGAAACACATATGTGAATTCTGCTCTAAGGCATTCAGTGAGCTGAGTGCGTTATACGGGCATTTGAGGGTCCACACAGATGAGAGGAAGGCTGCGAAGACATTCTCGTGTACGCATTGCAGTAAACGCTTCACCCATAAAGGCAATATGATCGCGCATGTCAGACGACACGAAGGTATTAAGCTTTTCAGATGTGATCATTGTGAGAGCAGTTTCGTCACCAAGGCAAAGTTAGCCATACACGTCCACAAGCACACGGGGGCTAATCCTTTTGTGTGTGAAGACTGTGGTGGTAGCTTCACCGCTTCAAGCTCGCTGGTAAaccacagacggacacacaccGGGGAGCGGCCTTATGTTTGTGACCAGTGCCCTATGACGTTTGCTGTCTCAGGCACGCTCAACAACCACCGGCGCACGCACACCGGTGAGAAACCGTATTCGTGCCCGTTCTGCGATAGAACCTTCGCCCAGCTCAGCTATCTGGTGGCGCACAAGCGGACACACACCGATGAGCGGCCATACAAGTGTTCTGTGTGCGGACAGAGGTTCCGGAACTACTACGCGTTGAAGAAACACCTCAAGTTACACACGGACAAGCCAGAATACATACCCAAGCATTTGGGTCTCCAAGGAGGGGAAAAAGAGGGGAGCctcgaaaaaaaacaattagcaCCAAAGAAACAAACAATATCAAAAACCCGATTgggtaataaataa
Protein Sequence: MESSLEINPDKVCRTCMAESANMRPLFHFAGDGRQTLSEDLSFVTNMLIKQEDKLPKQMCNDCEVILHQSSMFKRRCIDSEARFLRLLNTVNMEEIDTDITEKPLPKLDNCNETRSSNRGQPYQCSICIFKFSDIHKLESHIKNMHYKQEKEGSLTDGTFLSDSKHCADTFRRPTTVAKDSEQCTKEEIEYESMEFVEDNSSSESIDNFEECVDNRHHLSKSSLKEATDSPVKPSAVETRRHNIKNNLRRNSETETYVCEHCNLVLKTKSNLQNHLIRKHNKGPEKEREVEKRYKCPVCMCKFAYKCFLEVHMKRHEKPTVTAYICAACKRDFKRQRHLDNHIILVHSTENGLKCDYCPNSFATQESLDQHQTMHQNERKHICEFCSKAFSELSALYGHLRVHTDERKAAKTFSCTHCSKRFTHKGNMIAHVRRHEGIKLFRCDHCESSFVTKAKLAIHVHKHTGANPFVCEDCGGSFTASSSLVNHRRTHTGERPYVCDQCPMTFAVSGTLNNHRRTHTGEKPYSCPFCDRTFAQLSYLVAHKRTHTDERPYKCSVCGQRFRNYYALKKHLKLHTDKPEYIPKHLGLQGGEKEGSLEKKQLAPKKQTISKTRLGNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -