Zhep016932.1
Basic Information
- Insect
- Zelleria hepariella
- Gene Symbol
- -
- Assembly
- GCA_949319315.1
- Location
- OX439391.1:3190821-3216072[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.3 16 6.6 0.2 1 23 187 210 187 210 0.94 2 29 0.0041 0.23 12.4 2.2 2 21 243 262 242 263 0.92 3 29 0.0023 0.13 13.2 2.5 3 23 300 321 298 321 0.95 4 29 7.5e-05 0.0041 17.9 1.4 1 23 382 405 382 405 0.97 5 29 0.095 5.2 8.1 0.2 1 23 423 445 423 445 0.96 6 29 0.047 2.6 9.1 0.3 2 17 483 498 482 499 0.90 7 29 1e-05 0.00055 20.6 0.7 2 23 556 577 555 577 0.96 8 29 1.4e-05 0.00075 20.2 3.4 2 23 620 642 619 642 0.97 9 29 0.00044 0.024 15.5 0.7 1 23 693 715 693 716 0.96 10 29 0.0019 0.11 13.5 0.9 1 23 772 794 772 794 0.97 11 29 0.0044 0.24 12.3 2.7 2 23 806 827 805 827 0.94 12 29 0.096 5.2 8.1 1.7 2 23 839 860 838 860 0.96 13 29 0.0087 0.48 11.4 1.5 1 23 870 892 870 892 0.98 14 29 0.0039 0.21 12.5 1.9 3 23 919 939 918 939 0.95 15 29 0.0025 0.14 13.1 3.5 1 23 950 972 950 972 0.98 16 29 3.4e-05 0.0019 19.0 0.4 1 23 980 1002 980 1002 0.98 17 29 0.3 16 6.6 0.1 2 23 1022 1044 1021 1044 0.97 18 29 3.7 2e+02 3.1 1.0 1 16 1062 1077 1062 1084 0.80 19 29 0.4 22 6.1 3.3 1 23 1091 1113 1091 1113 0.95 20 29 0.02 1.1 10.3 2.3 2 23 1124 1146 1123 1146 0.95 21 29 0.0042 0.23 12.4 0.1 2 23 1169 1190 1168 1190 0.95 22 29 0.0022 0.12 13.3 0.2 2 23 1271 1292 1270 1292 0.93 23 29 0.043 2.3 9.2 3.2 5 23 1302 1320 1299 1320 0.94 24 29 0.00094 0.051 14.4 0.9 2 23 1331 1353 1330 1353 0.96 25 29 0.022 1.2 10.1 1.0 2 23 1370 1388 1370 1388 0.95 26 29 2.6 1.4e+02 3.6 0.8 2 20 1392 1410 1392 1412 0.86 27 29 0.29 16 6.6 1.5 2 23 1459 1480 1458 1480 0.95 28 29 0.0043 0.23 12.4 0.4 2 23 1491 1513 1490 1513 0.96 29 29 0.71 39 5.4 1.5 2 19 1551 1568 1550 1570 0.90
Sequence Information
- Coding Sequence
- ATGGCCCTCAAACTCGGAAAATGCCGACTTTGCCTCAAGCTTGGGGACTTCTACTCCATCTTCACGGTGGACAACTCGATGCAACTGGCCGAGATGGCCATGGAATGTGCGAGAATAAAAGTATATGATGGTGATGGTCTGCCTGACAAGGTTTGCTCGGAATGCATTCAGAAGCTGAGCAGTGCACACATTTTCAAGCAGCAGTGCGAGCGTGCAGACCAGGAGCTGCGCAGAAACTATGTGCCTCCACCAGGCTTCAGCGTCACCCCCTCACCCAACCGGCAGAGCAGCGACTCTCTTTTCTCGAGCAACACCGACCTCTCCGCCAAACCTTCATCTTCGACCGAGAGGAAGTCATTGCCCGCTGCCCGGGGCCGCAAGCGCAGCCTCGAGAGCGAAGCCTCTGCCAAGTCCATGGACAACTCCGCCAGACCACAACGCGAAAAGAGAACCCGCAAAGTGTCTGAAAACACCTCCATGCAGAATTCAGACTATGACTACGACTATGCAAACTACTCGGAGCCCGAGAGTGATTCCAACGAACCGCTGCTCAAGACCCATATTTGCGAAGTGTGCAACGCTGGCTTTGCGAGCAGAAAAGGTATGCTGATCCACTCAAAACGAGCACACTCGGAAAAGAGCCGCAGTGAAACTGTGGCTAAAATCCCTATTGAATACGGCAATATCCAGGCCAATCAGACGAATGATGAAGAAGACAGGCATTGCAGATGTGGCCGATGCGGCAAGAGTTTCAAACTCAAAATCATGCTGAAGAGACACTATGACACCTGCACCAGCCCAGAGCCGGGCCAACAAATAAGACAACAACCAACTAAAGAACTGGCGGTCACGTTGGAACCTATACCTTTCAATCTGGATAAGGATAAGAAGATTGACTGCAAAATGTGCGCgacaaagttcaaaaatgtggAGAACTTGGAAAAGCACATGAAAAACTGCCACGGTGGTGCGGTATTGCAGAAAGGATCTAACTTTGACAACAAGTATGTTGGGATGGTGGTTGcatcaacaaataataaaaagGTTCCCGTCCCGTGCATATACTGCTTCAAACACTTTGACGACTACTTCGTACACGCGGTACACTTCAACAGCTGCCCGAAGGCCACAAATAATGATATATTTGAGTGCAAAGTGTGCAACAAGCCTTTCTCCCGAAAGAACGCCTATTTCCTCCACATAAAGAACATGCACTTCGAGCCCCGGATGACGAATGCGGTGGCCAAGACGGGTGGCGGCGGCGCCTACCAGTGCCGGATGTGTTACAAGAAGATGCCCACACAGGAGCTCCTCATACAGCATCTGGCCGCACACGTGTCCAATATCGAGCACGGCGGCGACGAAGAGTCTGGAGCCAGCACGCTGGACGACGCCGGGTCCCAACACTCCAGCACCTCGCGCAACTCCGATGCGTCAGGCGCACTCTCGTGTACGCAGTGCGGCAAGGGGTTCTCCTACAAGAAGGCGCTAGAGAGCCCCTTGCCGCACTGCATGCTTAGGAGGGTAGGCCAGCTACTCCCTCATACTCCCGtcaaccactcggacgctgcagtgcctgggacattAGCCAGCACGCTGGACGACGCCGGGTCCCAACACTCCGAGCAGAGCACCTCGCGCAACTCTGATGCGTCAGGCGCACTCTCGTGTACGCAGTGCGGCAAGGGGTTCTCCTACAAGAAGGCGCTAGAGAGCCACATGCTTAAGCACATAAAGGAGGACGAAATGAAGGCCGAGCCGACCGACCCGTATAAGGACCCCAATATATCCAGCACCGACCAGTCCCGGTACAAAGATACCGAGTCGGAGAACTCCAGCCAAGAGGACGGCGACCTGACGTGCAACATCTGTGAGAAGATGTTCTCATACAAACGCGCCCTGAACCACCACATGAAGACAAAACACAACGTCAGGTCCAGCGTGAAACGGTCCGTTCCGGTCCTGGCCAAGAACTGCAAGGTGGAGTGCATGATTTGTGAGAATGAGATGACAGTGGCCACGTACAAGGAGCACAACAAGATGCACATGGAGCAAAACCTGAAGCCGAGCAACCGGTACACCTGCTACGGCTGCGGAGAGACCACCATGAGCCTCGTCAACCTGACCAGCCATATCAAAGTGCACCATAGACCGCTGCAGACGTCGCCGAAGAGGGCGTCAATGCCGTCGATGTCGATGGCGGATTTTTGTGAGGTCGTTGTGACAAAGACGGAACCGCTGGAAGTAATCCAGGGTCACAACGGCTTCGGCGAGGTTCCTTCGAGCACTCTCGACGCCAACTCGCCGGGCGAGTTCGTCTGTCCGGTCTGCGGCAAGAAGATGACCTCCCACCTGTCGCTGAAGCGACACGTCAACTGGCACACCAACATTGGGGACAGCAACGAGACGAGTATAGAGTGCTTCGTCTGCCAAGAGAAATTCAAGTTCAAGGGCCACTACCGGCGGCACATGGGGCAACACATGCGGGACACGAACCTGGACCCCAAGTTCCTGACCTGCTCCATCTGCAACCGACGGAGCAAGCACCTGCGCGCCGCACAGGCTCACATGAACTTCCACAAGCAAACCCGCTTCAACGCCAAAGACTATAAGTGCTCCATCTGCAAGAGGGTCTTCCAACTTCGCAAGGTCTACTTGACCCATATGAACGTACATTACAAACGAGGTGAGAGCATTAGGAACACGGTCGTCGGTGACGCCGCAAAGAAGGACGGAAAAAACTTAGACAACATCTGCCCTCTCTGTAACAAGGTTTGTGACAACGAAGTCTCTCTCAAACACCACATGGCGTTCCACAAATCAAAATCGTCCCTCTACGGCGCTAGGCACGAGTGCACCTTCTGCGAACTACAGTTCACCAACAAGCGAAGCCTGGTTCTCCACACACGCACACACTTTGAGGACGACAACGGACCCTACAAGTGTAACATTTGCGGCAAAGGCTACATTGACGAGGAGTACTTTAAGCGGCACGTCAAAGGACACAACTTTGACAACATGTCGCATAAGAAACGCATAGCGAAACTACGCGAGAACAAGGTCAAGTGCCCGATTTGCATCAAGTACTATCCCAATTTAGTCAAACTAATCGGACACTTGAGAAGGACGCATCCGGAAAGTAAGATGATTAAGGCCGACCCGGACGCGCCGCCGGCCGCCGTCTATCCGTGCAAGCTCTGCGCAAAGGTGTTCTATGACGAAAAGAGATTCAAGTTCCACGAAGAAGCACACTTGAGAAGACCCGAGTTTTTCAAGTGCAAATTTTGCGGCAAGAAGACGATCTCTCTCAAGAACCACAACGTCCACGTTAAGGGTCACCTGACCAGGAAACACGTCGACAATCCTCTCAAGTGCTCGCAGTGCGACGAACACTTTATCCGCGGGTACGATCTACACTACCATCTGAGGGATGTACACGACACCATAGAGAACTGGATCGCAGACCGGACGCAGCAAACATTAGACGGCCCTCTCAAGAAGCTACAATGCTCCATCTGCCTCAAAGTCCTAGCGAGCCAAGGGAACTACGAGCGGCACATTGACTACCACAACTCGCTGCGTTGCAATTACTGCTTTGACTATTTCAGCGCACTCCGCTTCCTAGAAGGCCACCTCGCTTTCTCGTGCGAAAAGAAAAAGCTGATCGGAGACACGGAGGTCTACCCTAAGAAGATCAAATGCCACGTTTGCTACAAAGCCTTCCATTTGCAAGTCAAAGCGGACTGCCACCTCAGAACTCAGCACGACATCAAAGTCTCCAGAGAGGTCGAGGAGGGACAAAAGGAGATCGTGTGCGATTACTGCTTCAAGGTTTTCGAGAACGAATACGCGTTGCAAACGCACAAGGTTTACCATCGAACTGTGGGTTACTACGGCTGCATTTACTGTGACAAGAAGTTCAACACTCTAGTCAATTATAGGAAGCATAAAAACCACCACAATTCTCAACTCAACATTGATAATCCTTCCAAGTGTGAACACTGTGAGGAGACGTTTGTTTCCTTTAGGGAGTTTATATGGCACATGAGGGACGCCCACGGAGACGACAAGGAGTGGGTGACAATGCCCAAAGAATCCATCGAGGAGGAGTGCCCGATATGCAAGAAAGTATTCTTTAACTTACAAAGACATCTGCAATACCACGAGGAGAACAGATGCAACAAATGTGGAGAGTACTTCTATTCCGTGCTTGACTTCGACAACCACCTCTGTGCAATCGAGAGCGACGAGGACACGGAAACGTACGTCGTTGAGCAACCAAAGTACGAAGAATGCCGATTCTGTTTCAAGGGCCTGACGAAAAACCATTCGAAGTTGAAACACGACTTGATCCACCGAGGCTCCGGCTCAATATCCTGTAGATTCTGCACGTTGAAGTTCAAAACACTCGACGCTTTCAATATCCACTCGTTTACGCACCGCAACAGAAAGTACAAGCAGAAGCCGATTAAATGCCGTAAGTGTGACGAGAAGTTCGTCCAATACGGTCCGTTTGTGAGGCACATGAAGCTCGTGCATAATTCAAAGAATAAGATGCACTACAGGGCGATTGTCAAAGCGGAACGGTGCGTGGTGTGCGGCGATGACTTCCCTAACTTACACAACCACTACCGAGCCCACTTGCAGAACCAATGCCTCAATTGCGGCAAGTATTTCACCTCGGCTAAAGTGTTCTCCCAACACGCTTGCGACAAGGAAGACAGCGACCCCACAAAAGTGTTTACGTCCGACGAAAATCTCCCCGCTCTGATCAATTCCTACGTACCCAAAGACGAGTGCGATGACGAGAAGTATTACGGGATGCAGGATGACGACGACGAAGAAGAAATATCTTCAACGGTCGAAGACGCGAGTGTGAatgttcaaacatttataaacgACGACGACATTAAGATCTCGACTGAAATGGAACACTTGGTCCCTCTCTCCATTCAGTCGCCCATCATATCGGAGGTCCTGTCGCTTTACCAGGAGACGAATAGTGACGTCATAAATTTAGAAGACGACGATGATATTGTGCAGACGGGCAGTGGAGCCGTGATCGACTTACTTGACGAGGATTCTCAATAA
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDNSMQLAEMAMECARIKVYDGDGLPDKVCSECIQKLSSAHIFKQQCERADQELRRNYVPPPGFSVTPSPNRQSSDSLFSSNTDLSAKPSSSTERKSLPAARGRKRSLESEASAKSMDNSARPQREKRTRKVSENTSMQNSDYDYDYANYSEPESDSNEPLLKTHICEVCNAGFASRKGMLIHSKRAHSEKSRSETVAKIPIEYGNIQANQTNDEEDRHCRCGRCGKSFKLKIMLKRHYDTCTSPEPGQQIRQQPTKELAVTLEPIPFNLDKDKKIDCKMCATKFKNVENLEKHMKNCHGGAVLQKGSNFDNKYVGMVVASTNNKKVPVPCIYCFKHFDDYFVHAVHFNSCPKATNNDIFECKVCNKPFSRKNAYFLHIKNMHFEPRMTNAVAKTGGGGAYQCRMCYKKMPTQELLIQHLAAHVSNIEHGGDEESGASTLDDAGSQHSSTSRNSDASGALSCTQCGKGFSYKKALESPLPHCMLRRVGQLLPHTPVNHSDAAVPGTLASTLDDAGSQHSEQSTSRNSDASGALSCTQCGKGFSYKKALESHMLKHIKEDEMKAEPTDPYKDPNISSTDQSRYKDTESENSSQEDGDLTCNICEKMFSYKRALNHHMKTKHNVRSSVKRSVPVLAKNCKVECMICENEMTVATYKEHNKMHMEQNLKPSNRYTCYGCGETTMSLVNLTSHIKVHHRPLQTSPKRASMPSMSMADFCEVVVTKTEPLEVIQGHNGFGEVPSSTLDANSPGEFVCPVCGKKMTSHLSLKRHVNWHTNIGDSNETSIECFVCQEKFKFKGHYRRHMGQHMRDTNLDPKFLTCSICNRRSKHLRAAQAHMNFHKQTRFNAKDYKCSICKRVFQLRKVYLTHMNVHYKRGESIRNTVVGDAAKKDGKNLDNICPLCNKVCDNEVSLKHHMAFHKSKSSLYGARHECTFCELQFTNKRSLVLHTRTHFEDDNGPYKCNICGKGYIDEEYFKRHVKGHNFDNMSHKKRIAKLRENKVKCPICIKYYPNLVKLIGHLRRTHPESKMIKADPDAPPAAVYPCKLCAKVFYDEKRFKFHEEAHLRRPEFFKCKFCGKKTISLKNHNVHVKGHLTRKHVDNPLKCSQCDEHFIRGYDLHYHLRDVHDTIENWIADRTQQTLDGPLKKLQCSICLKVLASQGNYERHIDYHNSLRCNYCFDYFSALRFLEGHLAFSCEKKKLIGDTEVYPKKIKCHVCYKAFHLQVKADCHLRTQHDIKVSREVEEGQKEIVCDYCFKVFENEYALQTHKVYHRTVGYYGCIYCDKKFNTLVNYRKHKNHHNSQLNIDNPSKCEHCEETFVSFREFIWHMRDAHGDDKEWVTMPKESIEEECPICKKVFFNLQRHLQYHEENRCNKCGEYFYSVLDFDNHLCAIESDEDTETYVVEQPKYEECRFCFKGLTKNHSKLKHDLIHRGSGSISCRFCTLKFKTLDAFNIHSFTHRNRKYKQKPIKCRKCDEKFVQYGPFVRHMKLVHNSKNKMHYRAIVKAERCVVCGDDFPNLHNHYRAHLQNQCLNCGKYFTSAKVFSQHACDKEDSDPTKVFTSDENLPALINSYVPKDECDDEKYYGMQDDDDEEEISSTVEDASVNVQTFINDDDIKISTEMEHLVPLSIQSPIISEVLSLYQETNSDVINLEDDDDIVQTGSGAVIDLLDEDSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -