Basic Information

Insect: Zelleria hepariella
Gene Symbol: -
Assembly: GCA_949319315.1
Location: OX439396.1:4070543-4084202[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 4.7e-05 0.0026 18.5 5.0 1 23 194 216 194 216 0.98

2 12 4.5e-06 0.00024 21.7 0.3 3 23 230 250 229 250 0.98

3 12 0.00014 0.0079 17.0 2.0 2 23 259 280 259 280 0.98

4 12 9e-05 0.0049 17.6 1.9 1 23 286 308 286 308 0.98

5 12 3.2e-05 0.0018 19.0 1.5 1 23 314 336 314 336 0.97

6 12 2.5e-06 0.00014 22.5 7.7 2 23 343 364 342 364 0.97

7 12 8.8e-06 0.00048 20.8 1.5 1 23 370 392 370 392 0.98

8 12 3.2e-06 0.00017 22.2 1.0 1 23 398 420 398 420 0.99

9 12 1.8e-05 0.00096 19.9 2.0 1 23 426 448 426 448 0.99

10 12 0.0018 0.098 13.5 2.6 1 23 454 476 454 476 0.96

11 12 3e-05 0.0017 19.1 1.5 1 23 482 504 482 504 0.97

12 12 1.3e-05 0.00074 20.2 2.0 1 23 510 532 510 532 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	4.7e-05	0.0026	18.5	5.0	1	23	194	216	194	216	0.98
2	12	4.5e-06	0.00024	21.7	0.3	3	23	230	250	229	250	0.98
3	12	0.00014	0.0079	17.0	2.0	2	23	259	280	259	280	0.98
4	12	9e-05	0.0049	17.6	1.9	1	23	286	308	286	308	0.98
5	12	3.2e-05	0.0018	19.0	1.5	1	23	314	336	314	336	0.97
6	12	2.5e-06	0.00014	22.5	7.7	2	23	343	364	342	364	0.97
7	12	8.8e-06	0.00048	20.8	1.5	1	23	370	392	370	392	0.98
8	12	3.2e-06	0.00017	22.2	1.0	1	23	398	420	398	420	0.99
9	12	1.8e-05	0.00096	19.9	2.0	1	23	426	448	426	448	0.99
10	12	0.0018	0.098	13.5	2.6	1	23	454	476	454	476	0.96
11	12	3e-05	0.0017	19.1	1.5	1	23	482	504	482	504	0.97
12	12	1.3e-05	0.00074	20.2	2.0	1	23	510	532	510	532	0.98

Sequence Information

Coding Sequence: ATGGCTGCTGCCAATAACCGCAAGTTCGAGTTCGACAAAATATGCAGAGCTTGTCTGACAATAAAAAAGGACATGAGACCCCTGTTCGAACAACTTACAGCTACCATGTTCATGGGGATATCAAAAGTTCAGGTCGCCGTGGGCGACGGGCTGCCCTCCCAGCTGTGTCTGCAGTGCGTACACCAGATCTCGCGCTGCCACTCCTTCAAGGAGCTCGTGGAGAGAAACGACGCTACTCTCAGAGAGTACGCCGAGACCCTCGCCCGGGAGCGGATGAAAAACGACGCGATGaaaaaagacCCGCTGGACCTGGGTTGTGGGGACGGGCCGTTCATGTACATCGACCTGCCATCGCTGGCTCCTGGCAACTCGCTTCCCATGGAGGGGCTGTTCCCCGACCAGCCGACCGACCTCGAGGAGACCAAGGTCGACTTGCTGGAGCTGCAGGCTGCGGAGAAGCTCGAAATAGAACCGCTAACCTCCCTGCCGGATAAGACCGAAGACAACATGAACTCCGACGAAGAAAACTACCTCCAGATGGCGGTCTTCCACGCGTCGGCCACCGTCGCGCCGGGCCGCCATGTCTGCAACCTCTGCTACAAGGAGTTTAAACACGCAAAGTGGCTCAAGCAACACATGAGGTCCCATAGCAACTGGATCAAGGCCAACTGCAAGAAGCCTCCCGCGTGCAATATCTGCGAGAGGACTTTTAAGGGTCCAGGGATGCTGAAGATGCACATGCGGACCCACGAGCAGCGTCCCCCCAAACAACCGACCTGCTCGGTCTGCCAGAGGAACTTTCCGACCAAGACACTGCTGTACCGGCACCGGCAGACTCACTTCGAGCAGAAGACGCACCAGTGCAACGTTTGCGAGAAGagGTTCTACAGCGGTTACGCACTGCGGTCGCACATGGCGCGGCACCGCGGAGAAAGACCCCACGTTTGCACCATGTGCTCGCAGCGATTCTACAACCCCACGGACTTGAAGGTCCACATCCGTCTCCACACAGGCGAAAAGCCGCTGAAGTGCACCGAGTGCGGCAAGACCTTCCGCCGACACTCGACCCTCTGCCAGCACATGAAGAAGCACCGCGGCATCCGCAACCACGTGTGCAATATATGCAAGAAGGGCTTCTACGAGGTCTCGAAGCTCAACGCTCACATGCGCACGCATACGGGCGAAAAACCATTCGAGTGTCCGTTCTGCTCGCGCAAGTTCGCGCAGCAGTCTGCGCTGATCTACCACCGACGGACGCACACCGGCGAGAAACCCTACACCTGTAAGCTCTGCTCCACCAGCTTTACCACCTCCTCGGCAAGGAACAACCATATGCTGACCCATACTGGGCACAAGAAATTCTCGTGCCCGATATGCTTCAAGGGCTGCTCGTCGCGCACGGAGCTGCGCGTGCACTCGACCAAGCACACCGGCGAGAAACTCTTCGCTTGCGAGTACTGCGAGCAACGGTTCAGCTCGGCCTCATACCTCGCCGTGCACCGGCGGCACCACACGGGCGAGAGGAGGCACCAGTGTAACGTGTGCGGAAAAGGGTACGTGGAGGCCCGCTCGTACAAGAAGCACATGAAGACCCACGAGCTAAAGAACGAGACCGAATCCTCCGAGAACAGCTCCGAGACAAAGAACGAACTGGTCGCAATGGTCGAGCAGAGCGTCGTTGTCGAGCCGGCGCAGCAGTGCGACTTTTGGCACATGAAGACCCATGAGCTAAAGAAAGAGACCGTATTGGTCGCTTTGGTCGAACAGAAAGTCGTTGTCGAGCCGGCGCAGCAGGTTAGTAAGGCTCCCTTCGCACTCTGA
Protein Sequence: MAAANNRKFEFDKICRACLTIKKDMRPLFEQLTATMFMGISKVQVAVGDGLPSQLCLQCVHQISRCHSFKELVERNDATLREYAETLARERMKNDAMKKDPLDLGCGDGPFMYIDLPSLAPGNSLPMEGLFPDQPTDLEETKVDLLELQAAEKLEIEPLTSLPDKTEDNMNSDEENYLQMAVFHASATVAPGRHVCNLCYKEFKHAKWLKQHMRSHSNWIKANCKKPPACNICERTFKGPGMLKMHMRTHEQRPPKQPTCSVCQRNFPTKTLLYRHRQTHFEQKTHQCNVCEKRFYSGYALRSHMARHRGERPHVCTMCSQRFYNPTDLKVHIRLHTGEKPLKCTECGKTFRRHSTLCQHMKKHRGIRNHVCNICKKGFYEVSKLNAHMRTHTGEKPFECPFCSRKFAQQSALIYHRRTHTGEKPYTCKLCSTSFTTSSARNNHMLTHTGHKKFSCPICFKGCSSRTELRVHSTKHTGEKLFACEYCEQRFSSASYLAVHRRHHTGERRHQCNVCGKGYVEARSYKKHMKTHELKNETESSENSSETKNELVAMVEQSVVVEPAQQCDFWHMKTHELKKETVLVALVEQKVVVEPAQQVSKAPFAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -