Basic Information

Insect: Zelleria hepariella
Gene Symbol: -
Assembly: GCA_949319315.1
Location: OX439381.1:21400493-21406737[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.12 6.7 7.8 0.3 1 23 163 186 163 186 0.96

2 13 2.4e-06 0.00013 22.6 2.2 1 23 196 218 196 218 0.99

3 13 0.006 0.33 11.9 0.4 3 23 226 246 224 246 0.95

4 13 0.00021 0.011 16.5 0.5 1 23 266 288 266 288 0.98

5 13 1.9e-06 0.0001 22.9 1.1 3 23 296 316 294 316 0.94

6 13 5.2e-05 0.0028 18.4 2.5 2 23 322 343 321 343 0.97

7 13 3.4e-06 0.00019 22.1 0.8 1 23 349 371 349 371 0.98

8 13 1.2e-05 0.00065 20.4 2.3 1 23 377 399 377 399 0.96

9 13 1.5e-06 8.1e-05 23.3 0.5 1 23 405 427 405 427 0.98

10 13 0.00019 0.01 16.6 1.4 2 23 434 455 433 455 0.95

11 13 4.5e-05 0.0025 18.6 4.9 1 23 461 483 461 483 0.99

12 13 6.6e-06 0.00036 21.2 0.8 1 23 489 511 489 511 0.98

13 13 0.0052 0.28 12.1 1.0 3 23 519 539 517 539 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.12	6.7	7.8	0.3	1	23	163	186	163	186	0.96
2	13	2.4e-06	0.00013	22.6	2.2	1	23	196	218	196	218	0.99
3	13	0.006	0.33	11.9	0.4	3	23	226	246	224	246	0.95
4	13	0.00021	0.011	16.5	0.5	1	23	266	288	266	288	0.98
5	13	1.9e-06	0.0001	22.9	1.1	3	23	296	316	294	316	0.94
6	13	5.2e-05	0.0028	18.4	2.5	2	23	322	343	321	343	0.97
7	13	3.4e-06	0.00019	22.1	0.8	1	23	349	371	349	371	0.98
8	13	1.2e-05	0.00065	20.4	2.3	1	23	377	399	377	399	0.96
9	13	1.5e-06	8.1e-05	23.3	0.5	1	23	405	427	405	427	0.98
10	13	0.00019	0.01	16.6	1.4	2	23	434	455	433	455	0.95
11	13	4.5e-05	0.0025	18.6	4.9	1	23	461	483	461	483	0.99
12	13	6.6e-06	0.00036	21.2	0.8	1	23	489	511	489	511	0.98
13	13	0.0052	0.28	12.1	1.0	3	23	519	539	517	539	0.95

Sequence Information

Coding Sequence: ATGGAAATCCACCCAGAAAATCCGTGGCCTAACTACGCATCCTGCTGCCGTACTTGCTTGGAGGCTTCGGACCATCTCTTTGACTTATTTACCATGTATGATAGCGATGGGACCGTTACTGCTGATATTCTTGCCTCCTGCACTTCTTTGAAGATTGACAAAGAAGACTGCCTTCCTAAGAATCTTTGTGAAACATGCTTCAACCTGCTCATAGGTTTCTATGCCTACAAAAAGCAAGCAGAGTCTGCCGACCTCAAACTAAGAACATGCTTGAAACCTAAAACTGTTAAGTTGGAAGTAGAATTTAAAATTGAGGAGCCTCCAATCAACAATGATTGTGACTACAATGATAGCTTCCAAGATTacgataatgatgatgacatcaaACCTCTGATTGAGCTCAAAAAAGATGTCAAACCACAGATCGGAAAAAACAAagggaaaaaagaaaaaaaggaaaaagtagAAAGCAGTAAAGTAAAAAACTATGTTTGCCCCCTCTGCTTAGTCCCGTTTCACTCACTGGGAGACAAGAAAGAGCACATCCGAGAGAGACACCCAGAAGTTGCAGAGAAAAAAACCCGTTATCAGTGCAACGAGTGTCCAAAGAACTTTCCAAAGTATTGCAACTTGCAAAGGCACATAGCAACTCACAATGCCGACAAACCATTTGGTTGTACACTTTGTCCAGAAAGATTCAAACGAGAATTCATGCTAGAAGACCATTTGTTTCTACATGAAAATAAAACTGAAGACTCTAAACCTGTGGTTCGTATCAAGACAGAGGCGGACGTATTCCAATGTGAAGTCTGCTCCATAGAGTTTCAATCGCAACACAGTCTTGCGGCGCACATGGGAAAACACAAGAAATCTAGAACCTTAGCCTGCGGAGAATGTGGTAAAGTATTCAAGAAGCGAAGCCATTTGAAACGGCATGAGGATGTACACAACAGGATTCCGATGAAATGTGACATGTGCGAAGAGACCTTTAAGAACAGACGGTTGTTGATCCACCACATAAACAAACATAAGGGTACACAGCAGTATGTTTGCAAGATTTGCTCAAAAGAATTTTCGTACCGGTCATCGTGGAAAGCTCATTTAAAGATACATTTGGGTGTGAAGGCTTACCTATGTCCGACTTGTGGCAAAAAGTTTGATTCGGGCAACAACTTGAAGCACCACATTAAAAGACATTTGGGAGACAAGTCGTTTGTCTGTAGTTATTGCCCGAAGAGATTTGTTAGTAAAGGCGAGCTCAAGTCCCACTTGGTGACTCATACCGGGGAACGTCCGTGGAAGTGCGACGAGTGCGGCAGCCGATTCACCAAGTCTACCTCCTTGACTAAGCACAAGCTACTGCATCTGAGCGTCAAGCCCTATGAGTGCGACACTTGCAGCATGAGGTTCACGAGCAAATACCACATGCAGCGACACTACCGCATTCACACGGGCGAGCGGCCCTACAAGTGTGATTTGTGCGAGCGCAGTTTCACGCAGACTGGCGATCTCATCAAGCACAAGCGGGCGCATTTGGGCGATAAACTGTATGGCTGCACCCAATGCACTCAGAGCTTCCGGCTCAAGACCGAGTTGAGTCGTCACGTGACGGAGCACTTCGTCTCGACCCCCGACCTCTCTTCAGAGCCCGGAGGAAACGCTGCTTCCCTGCTGACTCAGGGGAGTTTGTTGAACTAG
Protein Sequence: MEIHPENPWPNYASCCRTCLEASDHLFDLFTMYDSDGTVTADILASCTSLKIDKEDCLPKNLCETCFNLLIGFYAYKKQAESADLKLRTCLKPKTVKLEVEFKIEEPPINNDCDYNDSFQDYDNDDDIKPLIELKKDVKPQIGKNKGKKEKKEKVESSKVKNYVCPLCLVPFHSLGDKKEHIRERHPEVAEKKTRYQCNECPKNFPKYCNLQRHIATHNADKPFGCTLCPERFKREFMLEDHLFLHENKTEDSKPVVRIKTEADVFQCEVCSIEFQSQHSLAAHMGKHKKSRTLACGECGKVFKKRSHLKRHEDVHNRIPMKCDMCEETFKNRRLLIHHINKHKGTQQYVCKICSKEFSYRSSWKAHLKIHLGVKAYLCPTCGKKFDSGNNLKHHIKRHLGDKSFVCSYCPKRFVSKGELKSHLVTHTGERPWKCDECGSRFTKSTSLTKHKLLHLSVKPYECDTCSMRFTSKYHMQRHYRIHTGERPYKCDLCERSFTQTGDLIKHKRAHLGDKLYGCTQCTQSFRLKTELSRHVTEHFVSTPDLSSEPGGNAASLLTQGSLLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -