Zhep013281.1
Basic Information
- Insect
- Zelleria hepariella
- Gene Symbol
- -
- Assembly
- GCA_949319315.1
- Location
- OX439386.1:15010413-15014675[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.0035 0.19 12.6 0.9 2 23 74 96 73 96 0.95 2 28 0.0014 0.077 13.9 3.9 3 23 150 170 149 170 0.98 3 28 9.3 5.1e+02 1.9 0.0 2 23 193 215 192 215 0.88 4 28 0.00015 0.0084 16.9 0.2 2 23 236 258 235 258 0.95 5 28 0.00088 0.048 14.5 1.1 1 23 302 325 302 325 0.97 6 28 0.053 2.9 8.9 0.1 2 23 353 375 352 375 0.95 7 28 0.012 0.63 11.0 0.3 1 23 397 422 397 422 0.97 8 28 9e-05 0.0049 17.6 0.8 2 23 428 450 427 450 0.94 9 28 0.0021 0.12 13.3 2.5 1 23 455 478 455 478 0.96 10 28 0.0011 0.059 14.3 0.2 2 23 484 506 483 506 0.95 11 28 0.00054 0.03 15.2 2.2 2 23 511 533 510 533 0.96 12 28 0.00031 0.017 16.0 0.4 2 23 540 561 539 561 0.96 13 28 0.23 12 6.9 0.7 1 10 567 576 567 580 0.96 14 28 0.044 2.4 9.2 0.0 2 23 671 693 670 693 0.92 15 28 0.18 9.9 7.2 3.0 1 23 713 736 713 736 0.96 16 28 0.00013 0.0073 17.1 1.0 1 23 741 764 741 764 0.95 17 28 0.0072 0.39 11.6 0.9 1 23 769 792 769 792 0.97 18 28 0.0004 0.022 15.6 2.9 2 23 795 817 794 817 0.96 19 28 1.2 64 4.7 3.9 2 21 824 843 824 844 0.94 20 28 1.5 82 4.4 2.4 1 23 899 922 899 922 0.93 21 28 4.4 2.4e+02 2.9 0.0 2 21 950 969 949 972 0.85 22 28 0.00036 0.02 15.7 0.0 2 23 995 1017 994 1017 0.96 23 28 2.4e-05 0.0013 19.4 0.5 3 23 1024 1045 1022 1045 0.93 24 28 0.0059 0.32 11.9 0.8 3 23 1051 1071 1050 1072 0.88 25 28 0.018 0.98 10.4 4.0 1 23 1077 1100 1077 1100 0.94 26 28 2.5e-05 0.0014 19.4 3.3 1 23 1104 1127 1104 1127 0.97 27 28 0.00024 0.013 16.3 0.4 2 23 1134 1155 1133 1155 0.96 28 28 2e-05 0.0011 19.7 1.2 1 23 1161 1183 1161 1183 0.97
Sequence Information
- Coding Sequence
- ATGGAAGTATCCATAATGTGTTGCGATATCTGCTTCTGTCCGTCCGATACACTGCCGAAGCTTCTGGAACATCTGAAGAAGAAACACGACATCGACTATGATCATACAATAGGGCCATCTATCCAGCAATACAATCTTTTCTCGAAACGATGTCTGAAATGCAAAAAGAAGATGCCCATGCCTGCTCTAGTAAAGCACATGCACAAGTTTCACATGATTAAGTGTCATCTCTGTGATGCTCAGTACAGCAACAAGGAAGATCTTGTTTGGCATAAGAAATTACAGCATAATTATAAAGGACATTTTATAAAGAGGAGCAATTTCTTTGCAGATGAAGTTGCGAAGTCCAGAGACACGCAGGATAACCTCAAACTGAGGCGAAGGAATTTGGAAATACTACTGCGCAACACATCAGTAGTGCCATTCCAATGGAGAGGAAAAATATTATGTCACTACTGTGATAAAGATTTTATTGATTGCACTGAATTGAGAAATCACGCAAAATCGCACTCTAACTTTGAAAACCTGTTCACGGAAGATTCAGACCGAGAAATGATGCTTGAAGTCTCAGATACCCGCTGTGAAATATGCTACGAAATATTGCCGGATTTGGACGAAGTAATTGTCCATTTAACGTTCAAACATAAACTAGAATATAACAAAGACGTGGACTTGAAGCTAGAAGCGTTTAGATTGTCTGATTTATCATGTCCGAAGTGCGGCGAAGGGTTCGAAAACTTCGATAACCTTTTCGACCATGTAAGAAATTATCATCAACAAAAGACTGAGCCTAGAAAGTTAAACACTGCGCCGAGTGGCGTCAAAGTGAAGAAAATTAGGTGTAATTTAGCGTGCTTAATAAACATGTCGACGGCATTGCCGTTTAAGTATTTTATGAACAAGTTCCGCTGCTTCTATTGTCCAAAAGATTTCGTGGAATCGGATGACATGAAAGAGCACATCTGTGTTGAACATCCTAAATGCGATGTGAATCACAAGAGTATGAAATTGAGAGGTCTTCCTAACGTTTTCATAAAAATTGACATCAACAGTTTGAAATGTAAGGTCTGCTCCGAACCTTTGACAGATTTAGACACGCTGGTCGAACATCTTATATCTAAGCACAAGGCGCCGTATGACAAAACGGTCGATAGCAAAATACAAACATTCAAACTCGTGAAAGATAGCTACCCCTGCACCTATTGTCCGGAAAAAGAGCCATTTCGATATTTCGGTGAACTTCTGAAGCACATGAATAAAGAACATTCCAATAATAATCTAATTTGTCTGTACTGCGGCATTTCGTTTAGGTCGGATTCGCACCTGCGCACACACATTGCAAGGTACCACAGACCCGAGGGCCACAAGTGCACAGATTGTGATTTAGAATTCACAACAAAGCTCCGTCTTAAAAATCACAGAGCGAAGGCTCACGGAAAGAACATAGTCAAGTGCCCAGAGTGCCCCGAAAAATTCCCTACAACATATGAAAAGCAAAAGCACATGATAAACGTCCATAATTCGGGCTCCAAGTGCAAATTTTGCGACCGCATGTTTGTTAGGAACTCCTTTATGCAGAACCACATAAGCCGCATGCATTTGAAGGAGAAAAAAGTGGAATGCAACATTTGCAACAAGAGGTTTTTCGACAAAGTCGTTCTAAAGATACACATGGTCAAGCATGTCGGAGACAGAAACTTTCAATGCGATATTTGTGGGAAGAAATTCCTGTGGAAGAAGAATCTGAGAGATGAAGAGCCATCGAGCCTGTATGACCGTAAGACCGCGCGGCGTAGGCGCAAAAACTTAGAGATCATATTCAACAACACCTCAATAATACCTTTCAAGTGGCGTAGTCGGTTCCTCTGCTTCTATTGCGGGGACGGCCACACAAAGTACGATGAGCTCCGCAAGCACACGCTGTCGCACGGCAAATGTACCATTAAGGACTACGCACTAAAGCTCATCAAGGGGAACTATAACGAGGTCAAATTCGATGTCTCTGAGATCTCGTGCGAAATCTGCAATGAGCCTTTCAGTTCTCTAGATGAAATCATTGGCCATCTGAATGGGAAGCACGCATTCGATTACGACACCAACATTGAAACCCTGATACAGCAGTTTCGATTGACCGACCACAAATGCGTGTTTTGCAATGAGCAGTTCGACTACTTCCGTTTCTTAATAACTCATATGAACAACGTTCACGGAAGTAAATCGTTCATTTGTGACGATTGCGGCATTGTATGCAGTAAGAAGAGAGACTTGACGATGCACATTCGGGACAAGCACCAAACGGGGGGTTACCCATGCGAGGAATGTTCCGAAGTATTCGAAAGTTTCAACAGACTCAGAAATCACAAGAACAAAACGCACATTTTAAAATGCCACTACTGCGCGCTGACTTTCACATCGAAAGGACTGTTTAACAAACATTTGAAGTCTGAGCATCCGGACGATGGGTCCAGGAAATGCCCCTACTGCTCCCTTAAATGTCATTCGAAGTTCGGCCTCTCTCAGCATATGACCAAatgcaaaataaagaaaatcaaGCATGACAAAGAACCTTTTAATCATCCAGAAGCCGCGAACAAAGAGGAGCCGAGGGCGAAACAGGACGTGTTACAAATAAGAACGAACATTCAGTCCGTTGTCAATATGACTACTGCGATACCTTTCAAGTTCTTTACGAAGTTTCGTTGCTTCTTCTGTTACGAGAATTTCCAGCACATCGACAAGTTGAACGAGCACACGTTGGCTGAACACCCCGTGTGCGATATCAAGTGTACTTCGATGAAAAAGTGCAAAGGGGAAAGGGTGTGCGTGAAAGTAAACACCGTAGATCTGAAGTGTAAAATTTGCGATGCACCCATCGATGACCTGGACAAAATGATCGACCACATCGTTGACGAGCACAAAGCTAACTACGACAAATCTTTGACCGGTTGTCTGCTGGCCTTCAAGGTCTACAAAGACCATGTGCCGTGCCCCATCTGCAATGAAGACTTCCGATACATAAGCAATGTTTTGAAACACATGAACGTTGCGCACACTAACAATAACATCATATGCTCGTTTTGCGGCAAAACGTTTCGGTCCACGGCTAACTTGCGAGCTCATCTGTCTTATAACCATAACAAGGACTCGACCTGCGTCCCTTGCGGTATCTCGTTTAAGAACTCTGCTTACCTGGCCCGTCACAAAGCCAAACACCACAACGCGAAAGAGCACAAATGCCATCTCTGCGAAGAGACGTTCGCCTCCTCGTACAAACGCCAAAAACACCTCATTCAGGTACACAATACGGGTCACAAATGCACGTACTGCGATCGTATGTTCACGCGCAACTCTTTCATGATAGATCACATACGTAGGATACACTACAAGGAGAAGACTAAGCCTTGCTCGGTCTGTGGCGAGAAGTTCTTTGACAATTACTTGCTCAGGATGCATATGGTGAAGCACGATGGAGAGCGGAAGTTTCATTGCGATATTTGTGGGAAGTCTTTCCTTAGGCGCAGTAACTTGCAAGGACACATGGATGTGCATAAGAAGCAGGGCAAACAGGTCGAGGTTGAAGTGTGGTCGTAA
- Protein Sequence
- MEVSIMCCDICFCPSDTLPKLLEHLKKKHDIDYDHTIGPSIQQYNLFSKRCLKCKKKMPMPALVKHMHKFHMIKCHLCDAQYSNKEDLVWHKKLQHNYKGHFIKRSNFFADEVAKSRDTQDNLKLRRRNLEILLRNTSVVPFQWRGKILCHYCDKDFIDCTELRNHAKSHSNFENLFTEDSDREMMLEVSDTRCEICYEILPDLDEVIVHLTFKHKLEYNKDVDLKLEAFRLSDLSCPKCGEGFENFDNLFDHVRNYHQQKTEPRKLNTAPSGVKVKKIRCNLACLINMSTALPFKYFMNKFRCFYCPKDFVESDDMKEHICVEHPKCDVNHKSMKLRGLPNVFIKIDINSLKCKVCSEPLTDLDTLVEHLISKHKAPYDKTVDSKIQTFKLVKDSYPCTYCPEKEPFRYFGELLKHMNKEHSNNNLICLYCGISFRSDSHLRTHIARYHRPEGHKCTDCDLEFTTKLRLKNHRAKAHGKNIVKCPECPEKFPTTYEKQKHMINVHNSGSKCKFCDRMFVRNSFMQNHISRMHLKEKKVECNICNKRFFDKVVLKIHMVKHVGDRNFQCDICGKKFLWKKNLRDEEPSSLYDRKTARRRRKNLEIIFNNTSIIPFKWRSRFLCFYCGDGHTKYDELRKHTLSHGKCTIKDYALKLIKGNYNEVKFDVSEISCEICNEPFSSLDEIIGHLNGKHAFDYDTNIETLIQQFRLTDHKCVFCNEQFDYFRFLITHMNNVHGSKSFICDDCGIVCSKKRDLTMHIRDKHQTGGYPCEECSEVFESFNRLRNHKNKTHILKCHYCALTFTSKGLFNKHLKSEHPDDGSRKCPYCSLKCHSKFGLSQHMTKCKIKKIKHDKEPFNHPEAANKEEPRAKQDVLQIRTNIQSVVNMTTAIPFKFFTKFRCFFCYENFQHIDKLNEHTLAEHPVCDIKCTSMKKCKGERVCVKVNTVDLKCKICDAPIDDLDKMIDHIVDEHKANYDKSLTGCLLAFKVYKDHVPCPICNEDFRYISNVLKHMNVAHTNNNIICSFCGKTFRSTANLRAHLSYNHNKDSTCVPCGISFKNSAYLARHKAKHHNAKEHKCHLCEETFASSYKRQKHLIQVHNTGHKCTYCDRMFTRNSFMIDHIRRIHYKEKTKPCSVCGEKFFDNYLLRMHMVKHDGERKFHCDICGKSFLRRSNLQGHMDVHKKQGKQVEVEVWS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -