Zhep001268.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zelleria hepariella
Gene Symbol
-
Assembly
GCA_949319315.1
Location
OX439378.1:16951323-16975490[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.00039 0.021 15.6 1.7 1 23 419 441 419 441 0.96
2 20 0.0085 0.47 11.4 0.6 1 20 447 466 447 469 0.93
3 20 4e-05 0.0022 18.8 3.5 1 23 489 511 489 511 0.98
4 20 0.00024 0.013 16.3 4.7 1 23 517 539 517 539 0.99
5 20 4.8e-05 0.0026 18.5 5.3 1 23 545 567 545 567 0.97
6 20 1e-05 0.00057 20.6 7.1 1 23 573 595 573 595 0.97
7 20 2.4e-05 0.0013 19.4 3.4 1 23 601 623 601 623 0.97
8 20 0.00013 0.0072 17.1 6.7 1 23 629 651 629 651 0.97
9 20 0.00013 0.0071 17.1 6.5 1 23 657 679 657 679 0.97
10 20 6.3e-07 3.5e-05 24.4 1.9 1 23 685 707 685 707 0.98
11 20 1.3e-05 0.00068 20.3 7.7 1 23 713 735 713 735 0.98
12 20 0.00017 0.0092 16.8 6.6 1 23 741 763 741 763 0.97
13 20 5.8e-07 3.2e-05 24.5 4.4 1 23 769 791 769 791 0.98
14 20 9.1e-05 0.005 17.6 6.2 1 23 797 819 797 819 0.96
15 20 6.6e-05 0.0036 18.1 6.1 1 23 825 847 825 847 0.97
16 20 1.2e-06 6.7e-05 23.5 6.0 1 23 853 875 853 875 0.98
17 20 6.9e-05 0.0038 18.0 8.2 1 23 881 903 881 903 0.97
18 20 9.3e-06 0.00051 20.7 3.7 1 23 909 931 909 931 0.97
19 20 0.00044 0.024 15.5 1.8 1 23 938 960 938 960 0.97
20 20 0.036 2 9.5 6.4 1 23 970 992 970 992 0.99

Sequence Information

Coding Sequence
ATGAATCCGGAACATCATTCTATCAATACGGGTGGTGGCCAGCCACCAGGGAACACTGAGTCGCAGGTGCAGAGAGCCCAGGCTTCTCAGCAGCAGACTGCTACGTTGACGCCAACCACATCGGCAACAGATTTGAGAGTTAACTCGGCAGTCAACGttgctttgtccagtgtcgccAAGTATTGGGTGTTCACCAATCTGTTTCCTGGACCTATACCACAAGTGTCTGTGTACGGACTACCAACTGGTGCTCGGATAGAGAATGGAAAGCCTGTTCAGGATGCTCTCGGCCAACATGCCAGTATACTCAATGGAGACCCCAATATTATCCTTGGCCACCATGCCGGAGGGCAGTCACAAGTCACTGTCTCGGGGCCGGGGGGCCAACAGATACCGGTCACTCAGATCCTTGCTTCGCAGGCTGGACAAAGTCATGAAGCCCTGATCGCCCAGCAACAGGATCTGGGCCAGCAGGGCTCCAGCGCTGCGGTGTCCGTGAGCTCCGGCTCCGCCCACCACCAGGTACCCAATAACCGGGTGGAGTTTGTACAACACCATAACATAGATATGGTAAATCACGTGGGTCACCATTCACAACAGCAGCATATAATGCAGCAACAGCTTATGACAGCAACCCGGCCCGACCATACCAATCAACAGATCCAGCTAACGGTGAGCGAGGATGGCATAGTGACGGTGGTGGAGCCGGGCGGCGGCAAGTTGGTGGACAAAGAGGAGATCCATGAGGCGATCAAGATGCCCTCAGACCACACGTTGACCGTCCACCAGTTGCAGCAGATTGTTGGCCAACAGGTGCTCGACAGCGTGGTCCGTATCGAGCAGACGACCGGCGAGCCGGCCAGCATCCTCGTGACGCACAACCCTGACGGCACCACCTCCATAGAGGCCAGCGCTAATGAGACGCTAGTCGTGAAGGACGAAAAGAAGATGGACCCCGCGCCCCAGTTCACGATACCCGCCGATATCAAGGAAATCAAGGGCGCCATCGACTTGAAGAATGTCAGCACGATGAACATGGAAGGCGCCGTAGTGAAGATATCGGCCGGTGCGTCCGAACACGACCTCCATGCTATGTACAAGGTCAATGTGGAAGACCTGTCGCAACTACTGGCCTACCACGAGGTCTTTGGGAAGCTTAACACCGAGGGGCAATCGCAAGCTAAGCCGATCGAGATTGAAGTGGAGGCCGGCACCAGCGCTGCAATATCTGAGTCGGACTCCTCGCCGGGCCACCACGCCTGCGACTTATGCGGCAAGATATTCCAGTTCCGCTACCAGCTCATCGTGCACAGACGCTACCACGGCGAACGCAAACCGTTCTCGTGCCAAGTGTGCGGCTCGGCGTTCGCTAATCCTGTTGAACTTTCCAGACACGGGAAGTGTCACGTTGCCGGTAACCAGGAAGCGGAGAGGAATGCCAAGCGGCTGGCGCAGGACAAGCCGTACGCTTGCACCACGTGTCATAAAGCCTTCGCGCGCAAGGAGCATCTCGACAACCACGTGCGAAGTCACACTGGAGAGACGCCTTATAGATGCCAGTTCTGCGCAAAGACGTTCACCCGCAAGGAGCACATGGTGAATCACGTGCGGAAACACACCGGCGAGACGCCGCACCGCTGCGACATCTGCAAGAAGAGCTTCACAAGGAAGGAGCACTTTATGAACCACGTCATGTGGCATACCGGTGAAACGCCGCATCATTGCCAAATTTGCGGCAAGAAGTATACTAGAAAGGAGCATTTAGCAAACCACATGCGCTCTCATACCAACGACTCGCCGTTTCAATGTGAACTGTGCAGCAAGACTTTCACGCGGAAGGAGCACTTCAGCAATCACATATTGTGGCACACTGGCGAGACGCCCCACCGTTGCGATTTCTGCTCTAAAACGTTCACCCGCAAGGAGCATCTACTCAACCACGTGCGCCAACACACAGGGGAGTCGCCGCACCGCTGCAACTTCTGCTCCAAGTCGTTCACGCGGCGGGAGCACCTGGTGAACCACGTGCGGCAACATACCGGCGAGACGCCCTTCCAGTGCGGCTACTGCCCCAAGGCCTTCACAAGGAAGGACCATCTAGTGAACCACGTCCGGCAACACACGGGCGAGTCTCCACACAAGTGCTCGTACTGCACCAAGTCGTTCACCCGCAAGGAGCATCTCACGAACCACGTGCGGCAACACACGGGCGAGTCGCCGCACCGGTGCACCTTCTGCGCGAAGAGTTTCACCAGGAAGGAACACCTCAATAACCATGTTCGTCAACACACGGGCGAGACGCCCCACAAGTGCACCTACTGTCCGAAGGCGTTCAGTCGCAAGGAGCATCTGAACAACCACATCCGAGGTCACACCGGGGACATGCCGCACGCCTGCACTTTCTGCAGCAAGACATTCAGCCGGAAGGAGCATCTCAACAACCACGTGCGACAACATACCGGGGAGACTCCGTTCAAGTGCACTTACTGCGCCAAGTCGTTCTCCCGCAAGGAGCACCTGACCAATCACGTGCATCTCCACACCGGAGAGACGCCGCACAAGTGTCCCTTCTGCACCAAGACCTTCTCCAGGAAGGAGCATCTCACCAACCATATCAGGATACACACGGGCGAGTCGCCGCATCGCTGCGAGTTCTGCCAGAAGACTTTCACGCGCAAGGAACACCTGAACAATCATCAGAAACAGCACACGGGCGACACTCCGCACATGTGCAAAGTCTGCTCCAAACCCTTCACTAGGAAGGAACACCTCGTCTCGCATATGAGGGCGCACAGTTGCGGCGAGCGGCCGTTTAGCTGCGAGCACTGCGGCAAGTCGTTCCCGCTGAAAGGGAACCTGATGTTCCACGAGCGGTCGCACTACAAGACCGGCGTGGGCGCGCGACCCTTCCGCTGCGACGTTTGCTCCAAAGACTTCATGTGCAAAGGTCACCTGAACACACACCGGCGCACGCACACCgaggcgggcggcgcggcgccgcCGGTCGAGGCCGAAGAGTGCACCAGCGCTTGCGCCAAAATAGAGCCCGGGACCGAAgaggcggcggtggcggccgtGGCGGCGACGCCCGCGCAGCCGCAGCGGATCGACAGAAAACTTGACAGAAATTCGACGGAAAATCGAACGAGTGAAGCGACCGTGGCGCAGACCCCACAAAGCAATGCGACTGTGATGCAAATAACTAGCCAGCAAgtccgcgcgggcgcagcgaCGAGCGGCGCCGACGTCGCGGCGAGCGTCACGACGTACACGCACACGCCGGCGATCGCGCACCACCCCGTCACCGTCAACTATTAG
Protein Sequence
MNPEHHSINTGGGQPPGNTESQVQRAQASQQQTATLTPTTSATDLRVNSAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPVQDALGQHASILNGDPNIILGHHAGGQSQVTVSGPGGQQIPVTQILASQAGQSHEALIAQQQDLGQQGSSAAVSVSSGSAHHQVPNNRVEFVQHHNIDMVNHVGHHSQQQHIMQQQLMTATRPDHTNQQIQLTVSEDGIVTVVEPGGGKLVDKEEIHEAIKMPSDHTLTVHQLQQIVGQQVLDSVVRIEQTTGEPASILVTHNPDGTTSIEASANETLVVKDEKKMDPAPQFTIPADIKEIKGAIDLKNVSTMNMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNTEGQSQAKPIEIEVEAGTSAAISESDSSPGHHACDLCGKIFQFRYQLIVHRRYHGERKPFSCQVCGSAFANPVELSRHGKCHVAGNQEAERNAKRLAQDKPYACTTCHKAFARKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLANHMRSHTNDSPFQCELCSKTFTRKEHFSNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLNNHVRQHTGETPHKCTYCPKAFSRKEHLNNHIRGHTGDMPHACTFCSKTFSRKEHLNNHVRQHTGETPFKCTYCAKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHIRIHTGESPHRCEFCQKTFTRKEHLNNHQKQHTGDTPHMCKVCSKPFTRKEHLVSHMRAHSCGERPFSCEHCGKSFPLKGNLMFHERSHYKTGVGARPFRCDVCSKDFMCKGHLNTHRRTHTEAGGAAPPVEAEECTSACAKIEPGTEEAAVAAVAATPAQPQRIDRKLDRNSTENRTSEATVAQTPQSNATVMQITSQQVRAGAATSGADVAASVTTYTHTPAIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01546831;
90% Identity
-
80% Identity
-