Basic Information

Gene Symbol
Ncapd3
Assembly
GCA_949319315.1
Location
OX439389.1:12285286-12313370[-]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.0049 4.6 7.7 0.3 31 43 1461 1473 1456 1474 0.91
2 5 0.0044 4.2 7.9 0.2 31 43 1505 1517 1499 1518 0.90
3 5 0.0044 4.2 7.9 0.2 31 43 1549 1561 1543 1562 0.90
4 5 0.0044 4.2 7.9 0.2 31 43 1593 1605 1587 1606 0.90
5 5 0.0034 3.2 8.2 0.1 31 43 1639 1651 1633 1652 0.90

Sequence Information

Coding Sequence
ATGAATCAAGTGCTAGATGAATTAAACTCCCTGTGCTTGGATTCCCTCGACGAGGATTGGGTTCAAGCTATTTACCATTCGGAATTCCTAGAGATAGCAGACTTTCCCGCGGAATATGAAAGCGAATTGGAGTCAGTCACCATCCACAAGGTTTTCCAGAATCTAATCAAGAATATAAACAACTGGCTTGGTGCTAAAGATGACGGAGAACAGGATAAGTCGTGGGCGGCGCTGTCCCCTATGATTCAGCATCAGAGGTTGCTCACAGTGCTCGCCTATTACATAGATCATGGGACGAAGAATGTGCATACGAAGGAGTATCGAAACAACGCGTTGCTGGCCTCACGCGTGTACTACACCCTTTTGTCCATTCCCGGTTACAAGGCTTACCACATCTACCATGCTCAGTTGTTCACCCACTCCCTCGGCTGCCTCAGCTTCCCCAAGGAAATGTGTGAGAAAGAAGATAACTACTTCAACACGAAAGAGCTCACTAGAGAGGTTAACTCTGTGATAAGAGAATTGGGGCCCTATGTACACGATCTAAGGTCAGTTGTTGAAACACTACAACTGAAGCCTACAGACATGAACTTTGAAGACATACTGAGCAACTTGGTTGATATCACTGGAGGTGCTATAGTGAACAAACTTAACATAGACAAGATAGAGCTGGCCAACATATCCCGTGTGATCTACCTAATGATAGATACGCTGCTGCAGGAGCCGGACGGAGAGCCGAGTGCCGTGGCCATTCAGCTGCTCTTCAAGTGCCTCCTGCCCAAACTGGTGGCTGCATCCGTGGACTCCCGTAATGCTAatAATCTTGTCCGGGCCTCCTATGTGACATACTCAGGATTGTTGCTCACTCGGTATGGCAAAGCTGCAGTTGCGGGCTTCTCAATACTCCTGCAACATCTGTGCTACGCTCATGATGGCTTGGAACGCGCCGAGTCGCGCGCGGCGCGCGTTCAGCTCGTGTCGGGTCTGATGAGCCTGCTGCCGCGCCGCGCCTACCGCGCCACCTTCAAGTGGCTGGTGCAGCTCACCTCCACCGCCAAGGTGTCGCACCGCCACATCGCCATGGAGATGTTAGCAAACTTATTGAGCAACGAACCCGAAGAAGTGGTCGAGGAACCGGCGCTGGAAGTGCAAGAGCCACCGCCGACGTcagATTCACCAACTGATGGAGAGTTAGCGGCCAAAGAAGAGGGCGAAACTGACGGCCAGCCAGAAGCAAAAGACGGTGAACCACCAGCCATTAGCGAGGCTGAAAACAACTCCGAGTCTACAGAAGAACCAACAGCCAAGACGGACACCACGGACACTGACAACAGTTCAGAGCCACCGGGGGTTCCGTTAAAGGAAATTAAGGAGTTCGAATCGCCCGAAGACGAGGTGGCGGGGCTGCTGCGGTCGCGCGCCCACACCGTGCCTCACGGGGAGATCCTGACCGCGCTGGCCGCGCGCGCCAACGACGCGTCGGGGACTCTGCGTGCGCGCACGCTCGGGATACTGGCTGACGTGCTCGGGACCAAGCGGCCGGCGCTTCAGGTCGCTCTCAAGAAACTGAACGCGGGTGGCGAGGTCTCCCGCCTCGTGGCGCTAGCGGCGCAGTGCGCGGGCGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGAACGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGAACGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGTTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCTCTCAACTTGATGCACAAGTGTATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTAAGGTCACTCCGCCTGGTGGCGCTAGACGAGCGAGCGGCGGTGCGCCGGGCTGCGCTCAACTTGATGCACAAGTGCATAGCGGCCGGAGAGGACAGCCTGACCGAGATGAACCTCGCGGTACTGACAAGCCTGTGCCGCGACGCGAGTATAATCGTCCGATCTGCCGCCATAGCGGCCCTCGGCGAGCTGATGGTCCAATGGGGCCGCGCCAGCGTCCTCGACGCCTTCCTAGCGGGCCCCTTGCACCAGCTGTCGGACCCCGAGACGAAGGTGCAAGAGCAGCTCGTGACATTGGTCCAACAGGCTGTGATCGACCGGCTGACCGCATACAGCGCGTGCGCCGCCGCCGACCCGCTGCCCTGGGCCTTCCTCGCCGCGGTCACCACGCACAACATGCGCCGACACCTGCAGAAGGCCTGCATGCTCATTCACAAGGCCACTAGCTGCAtcagGCCACTAGCTGCAtcaggtgagagagagagagagctgccCTGGGCCTTCCTCGCCGCGGTCACCACGCACAACATGCGACGACACCTGCAGAAGGCCTGCATGCTCATTCACAAGGCCACTAGCTGCAtcagGCCACTAGCTGCAtcaggtgagagagagagagagctgccCTGGGCCTTCCTCGCCGCGGTCACCACGCACAACATGCGACGACACCTGCAGAAGGCCTGCATGCTCATTCACAAGGCCACTAGCTGCAtcagGCCACTAGCTGCAtcaggtgagagagagagagagctgccCTGGGCCTTCCTCGCCGCGGTCACCACGCACAACATGCGACGACACCTGCAGAAGGCCTGCATGCTCATTCACAAGGCCACTAGCTGCAtcagGCCACTAGCTGCAtcaggtgagagagagagagagagagagctgccCTGGGCCTTCCTTGCCGCGGTCACCACGCACAACATGCGACGACACCTGCAGAAGGCCTGCGTGCTCATTCACAAGGCCACTAGCTGCAtcagCCACCGGCTCGTGGATGCGCTCAGCACTCACCTGGGCGCTCTCAGCGACGCGCGCGACCTGCACACCCTCGTGATGATGACGAGTGTGGCTCGACTCGTGCCCTACACCGAGACTGCCTTCCTGCTTGACTACTACTACAAGCTGGCGGATAACCCGCAGGGTCGTGACGCTCGTCTTCTGCCCCTGACCCTGGAGATGCTAACGTCGTGGTCGCGGTACATCGGTGATCAGGAGCGATCGGAGCTACGCGCGCACCTGATCCGGTCACTCGGTGCCGCCGTGTATGGCGCGGACAGTTGCCGGACGGCGTGCGCTGCGCTCGCCTCCCATTTGGACCCCAACAACCTGCAGTGGGCCACCGAGATTATGCAGATATACGAGCGACGCTCGCTAGAGGGCGGCACGGTGGACGAATGGCTTGTCGCGGCAGACATGTCGCTTGTCGCACCCGAGCCGCCCGCGCCAGCGCTGCTGCGATTGTTCCTTAACGCCGTAGACAACCCGCCCGCAGACACGGACGCAGCGACGCGCGGCTGCGCCGTGGCGGGGCTGGGTCGCCTGTGCGTGCGGTCGcgcgacgccgccgccgccgccgcgccgccgctctCGCGCCTCCTGTTCGCCGACCACGAGCCCATAGCCGCAAGGGTCAACGCTCTGCTGGCTCTCACCGACATATGCACCAGGTACACGTGCATCGTGGAGCCGCTGCTAGGGTCAGTGTGCGGGTGCTTCGCCCCCTCCACGCCGGCGGCGCTGCGGCGCGCGGCCGCCGCCTCGCTCACACGCCTGCTACTGGGCGGGTACCTGCGTCTGCGCACTCCGCTCTACTACCGTTACTGCGCTCTGCTGGCGGACGAAGACCCGGACGTGCGCGAGCCAGCCGAGTACTACGTGACTTGCTGCCTCACCCCCGACTCGATCTACCAGCATTTCGTCGAGTGTATCCTGCACTATAACAAAACTGACACGGAGAACATCTCGTTCGACGCGCGCCAGCTGATCTACGACGTGATGCTGCAGCGTTTGTCGCTCGTGCAGCGACTAAACGTGCAGTGTCGCCTCGCGCGCGAGATACTGGAGCACGCGGCAGACATGTGCGACGAGGGCGATGGCGACTCGGAGCTCGCGCCCGCGCTTCATGCGGCGCTGCTCGACTCTATTACTCTGCTTTGCGGCCCACGGATGAAACTACCGCGTAAACCTCAAAACACCGGCGACGGTAACGACATCGACGATCTGCAGGAGCGTGTCACCACCAACATCGTTTCACATAAAATGAAGCGAACAGTGGCCGAGGTGTTGGTGCCGGCGGTGCTGCGCCTGTACGCGCGCATGCGCAGCCGCGGCGGACAGCTCAACGTGTATCTCGTGCGCATCGCCACAGACCTGCTCAAGGACTACCGCCAGGAGATCGAGGAGCTAATCGAGAACGACGAAGAGCTAGTCGAGCGCGTGCGCCAGTTCCAGCAAACCATCGGTGAAGAGCCCTCCTTTGGAAACACGCGCAATCTGGTCACGAGCAGTACGGCGCACGAGCCCGAGACGCCGCGGTCGACACGCCGCCGGCCCGCCGCGCGCACGCCCAAAGGACGCGGCCCGCCCGCCAAGCGCCTCCTTAAGGTCTAA
Protein Sequence
MNQVLDELNSLCLDSLDEDWVQAIYHSEFLEIADFPAEYESELESVTIHKVFQNLIKNINNWLGAKDDGEQDKSWAALSPMIQHQRLLTVLAYYIDHGTKNVHTKEYRNNALLASRVYYTLLSIPGYKAYHIYHAQLFTHSLGCLSFPKEMCEKEDNYFNTKELTREVNSVIRELGPYVHDLRSVVETLQLKPTDMNFEDILSNLVDITGGAIVNKLNIDKIELANISRVIYLMIDTLLQEPDGEPSAVAIQLLFKCLLPKLVAASVDSRNANNLVRASYVTYSGLLLTRYGKAAVAGFSILLQHLCYAHDGLERAESRAARVQLVSGLMSLLPRRAYRATFKWLVQLTSTAKVSHRHIAMEMLANLLSNEPEEVVEEPALEVQEPPPTSDSPTDGELAAKEEGETDGQPEAKDGEPPAISEAENNSESTEEPTAKTDTTDTDNSSEPPGVPLKEIKEFESPEDEVAGLLRSRAHTVPHGEILTALAARANDASGTLRARTLGILADVLGTKRPALQVALKKLNAGGEVSRLVALAAQCAGDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLNEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLNEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVRSLRLVALDERAAVRRAALNLMHKCIAAGEDSLTEMNLAVLTSLCRDASIIVRSAAIAALGELMVQWGRASVLDAFLAGPLHQLSDPETKVQEQLVTLVQQAVIDRLTAYSACAAADPLPWAFLAAVTTHNMRRHLQKACMLIHKATSCIRPLAASGERERELPWAFLAAVTTHNMRRHLQKACMLIHKATSCIRPLAASGERERELPWAFLAAVTTHNMRRHLQKACMLIHKATSCIRPLAASGERERELPWAFLAAVTTHNMRRHLQKACMLIHKATSCIRPLAASGERERERELPWAFLAAVTTHNMRRHLQKACVLIHKATSCISHRLVDALSTHLGALSDARDLHTLVMMTSVARLVPYTETAFLLDYYYKLADNPQGRDARLLPLTLEMLTSWSRYIGDQERSELRAHLIRSLGAAVYGADSCRTACAALASHLDPNNLQWATEIMQIYERRSLEGGTVDEWLVAADMSLVAPEPPAPALLRLFLNAVDNPPADTDAATRGCAVAGLGRLCVRSRDAAAAAAPPLSRLLFADHEPIAARVNALLALTDICTRYTCIVEPLLGSVCGCFAPSTPAALRRAAAASLTRLLLGGYLRLRTPLYYRYCALLADEDPDVREPAEYYVTCCLTPDSIYQHFVECILHYNKTDTENISFDARQLIYDVMLQRLSLVQRLNVQCRLAREILEHAADMCDEGDGDSELAPALHAALLDSITLLCGPRMKLPRKPQNTGDGNDIDDLQERVTTNIVSHKMKRTVAEVLVPAVLRLYARMRSRGGQLNVYLVRIATDLLKDYRQEIEELIENDEELVERVRQFQQTIGEEPSFGNTRNLVTSSTAHEPETPRSTRRRPAARTPKGRGPPAKRLLKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-