Zhep020524.1
Basic Information
- Insect
- Zelleria hepariella
- Gene Symbol
- COPS7B
- Assembly
- GCA_949319315.1
- Location
- OX439395.1:11457494-11461721[+]
Transcription Factor Domain
- TF Family
- TEA
- Domain
- TEA domain
- PFAM
- PF01285
- TF Group
- Helix-turn-helix
- Description
- The TEA domain is a DNA-binding region of about 66 to 68 amino acids that has been named after the two proteins that originally defined the domain: TEF-1 and AbaA. The TEA domain is located toward the N terminus of eukaryotic transcription factors of the TEA/ATTS family. It shows a three-helix bundle with a homeodomain fold [3, 1]. Two α-helices are nearly anti-parallel and pack on either side of the third one, which is the DNA-recognition helix of the TEA domain. Phosphorylation of one or both of the two conserved serines found on the DNA-binding surface could interfere with DNA-binding activity, by introducing electrostatic repulsion and/or steric hindrance, and help regulate the transcription factor activity of the proteins [2, 1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.0063 75 4.1 0.0 5 43 227 265 187 293 0.58 2 7 0.012 1.5e+02 3.2 0.0 5 45 266 306 260 333 0.81 3 7 0.014 1.7e+02 3.0 0.0 5 45 305 345 301 371 0.81 4 7 0.0047 56 4.5 0.0 5 42 383 420 339 459 0.60 5 7 0.011 1.3e+02 3.3 0.0 5 46 422 468 417 495 0.78 6 7 0.013 1.6e+02 3.1 0.0 5 45 461 501 457 528 0.80 7 7 0.011 1.3e+02 3.4 0.0 5 46 500 547 496 578 0.78
Sequence Information
- Coding Sequence
- ATGAATCCAATTTCGATGGATAAAGACGAGCCCTCATCGCTGCTTGCTTTCTCATCCAATCACCCGTTGGAGCAATTCTTGCTGTTAGCAAAAGGCGCGAAGGGCCAGGCATGTGCTGAGCTCATCAAACAAGTCCTAGAAGCACCAGGAGTCCACGTTTTCGGTGAACTTCTGGAGATGCCAAATATAACAGAGCTAGAAGACGGCCCGTATGCAACACACCTGAAGACGCTCAATCTCTTTGCCTACGGCACATACAAAGATTACCTCGAGAACAAATCGGACTACCTCGAGTTAACCTCGGCACAATGCAAGAAGCTACAGCACTTGACGATTGCGACGTTAGCTACACAGGAGAAGTGTATACCATACAGTGTGTTATTGAAAGAGTTGGACATTAAGAATGTTAGGGACTTGGAAGACTTGATTATTGAAGCTATTTATGCAGACATAATCCACGGCAAGCTCGACCAAGAATGCGCGCGCGTCGAGGTCGACGTCGCTTTAGGCCGCGACGCGCGGCTGGAGGACGCGGCGCGTATCGCCGACGTGCTCGGCGACTGGTGCGGCGCGTGCGAGGCCGTGCTAGCGTCCGTCGACCAGCACATCCAGCGAGCCAACCAGCACAAGCTGCGCGCGAGGACGCACCACATGCAGCGGGACCAGGAGGTAAGCGACTGGTGCGGCGCGTGCGAGGACGTGCTAGCGTCTGTCGACCAGCACATCCAGCGAGCCAACCAGCACAAGCTGCGCGCGAGGACGCACCACATGCAGCGGGACCAGGAGGTAAGCGACTGGTGCGGCGCGTGCGAGGACGTGCTAGCGTCTGTCGACCAGCACATCCAGCGAGCCAACCAGCACAAGCTGCGCGCGAGGACGCACCACATGCAGCGGGACCAGGAGGTAAGCGACTGGTGCGGCGCGTGCGAGGACGTGCTAGCGTCTGTTGACCAGCACATCCAGCGAGCCAACCAGCACAAGCTGCGCGCGAGGACGCACCACATGCAGCGGGACCAGGAGGTAAGCGACTGGTGCGGCGCGTGCGAGGACGTGCTAGCGTCTGTCGACCAGCACATCCAGCGAGCCAACCAGCACAAGCTGCGCGCGAGGACGCACCACATGCAGCGGGACCAGGAGGTAAGCGACTGGTGCGGCGCGTGCGAGGACGTGCTAGCGTCTGTCGACCAGCACATCCAGCGAGCCAACCAGCACAAGCTGCGCGCGAGGACGCACCACATGCAGCGGGACCAGGAGGTAAGCGACTGGTGCGGCGCGTGCGAGGACGTGCTAGCGTCTGTCGACCAGCACATCCAGCGAGCCAACCAGCACAAGCTGCGCGCGAGGACGCACCACATGCAGCGGGACCAGGAGGTAAGCGACTGGTGCGGCGCGTGCGAGGACGTGCTAGCGTCTGTTGACCAGCACATCCAGCGAGCCAACCAGCACAAGCTGCGCGCGAGGACGCACCACATGCAGCGGGACCAGGAGGTAAGCGACTGGTGCGGCGCGTGCGAGGACGTGCTAGCGTCTGTTGACCAGCACATCCAGCGAGCCAACCAGCACAAGCTGCGCGCGAGGACGCACCACATGCAGCGGGACCAGGAGGTAAGCGACTGGTGCGGCGCGTGCGAGGACGTGCTAGCGTCTGTCGACCAGCACATCCAGCGAGCCAACCAGCACAAGCTGCGCGCGAGGACGCATCACATGCAGCGGGACCAGGAGATCCTCCACATAAAAAAGACGTTGAACGTGCGCGCCGAGAGCGACGAGTCCGCCTTAGCCGGCGCCGAGAGCCACTCTGCACCCAAGAAGAGCTCCGGGAAGTCGAAGACGCCGCGCACCACCCCCAAGTTCTGGCAGAAAACCACCTAG
- Protein Sequence
- MNPISMDKDEPSSLLAFSSNHPLEQFLLLAKGAKGQACAELIKQVLEAPGVHVFGELLEMPNITELEDGPYATHLKTLNLFAYGTYKDYLENKSDYLELTSAQCKKLQHLTIATLATQEKCIPYSVLLKELDIKNVRDLEDLIIEAIYADIIHGKLDQECARVEVDVALGRDARLEDAARIADVLGDWCGACEAVLASVDQHIQRANQHKLRARTHHMQRDQEVSDWCGACEDVLASVDQHIQRANQHKLRARTHHMQRDQEVSDWCGACEDVLASVDQHIQRANQHKLRARTHHMQRDQEVSDWCGACEDVLASVDQHIQRANQHKLRARTHHMQRDQEVSDWCGACEDVLASVDQHIQRANQHKLRARTHHMQRDQEVSDWCGACEDVLASVDQHIQRANQHKLRARTHHMQRDQEVSDWCGACEDVLASVDQHIQRANQHKLRARTHHMQRDQEVSDWCGACEDVLASVDQHIQRANQHKLRARTHHMQRDQEVSDWCGACEDVLASVDQHIQRANQHKLRARTHHMQRDQEVSDWCGACEDVLASVDQHIQRANQHKLRARTHHMQRDQEILHIKKTLNVRAESDESALAGAESHSAPKKSSGKSKTPRTTPKFWQKTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -