Basic Information

Gene Symbol
rcor2
Assembly
GCA_949319315.1
Location
OX439381.1:23231277-23240835[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-08 3e-05 24.5 0.0 3 46 132 175 130 175 0.97
2 2 2.1e-10 2.3e-07 31.2 0.0 3 46 398 441 396 441 0.96

Sequence Information

Coding Sequence
ATGGTTTTGGCCGAAAGAAGTACCGACGTTCGAAATGGCAAGCGGTCGAGGGGGCCAAGCCCCAATGGCCATGGAAGTCCTGACTCCAGTTCTGAAGACGAGAATGTAGTACCGTTTGCAGCTGAGAAGATCCGAGTGGGTAGAGACTACCAGGCCGTTTGTCCGGAGCTGGAGCCCTTGGAGCAGAGGAGGCCTGAGCTTACAGCTGACCGAGCGCTGCTAGTGTGGTCACCCACAGCTGAAATATCTGATCCCAAGTTGGATGAATACATAACAGTAGCTAAAGAGAAGTATGGATACAATGGCGAGCAAGCCCTGGGCATGCTATTCTGGCACAAACACGACTTGAACCGAGCGTCTATGGACTTGGCCAACTTCACACCCTTCCCCGACGAGTGGACGGTGGAGGACAAGGTGTTGTTCGACCAGGCCTTCCAGTTCCATGGCAAGAGCTTTCATAGGATACGGCAAATGTTGCCTGACAAGTCAATAGCGTCCCTGGTCAAATATTATTACTCATGGAAGAAAACCCGCGCGCGTACGTCTCTGATGGACGTGGTAGGAGAGAACCGTAATGCTAACACATCTACCGGAGGCAAACGGGAGTCCGGTGGTTCAGAACCGGGTGGCTCTGACAAGGAATCCGACAATGATGAAAAGAGGTGGACTTTCCACCGCGGTATAGTCCGCGGCAGTACGCCATCGGACCGGGCTACGCTACGGGCTTCCAACTCCCTGCAACCTCAGGGCGAGAACGGCGGCGACCAGAACAAGTGGTGTACTGTGTGCGGCATTCTTTGCTCCCAGACAACGGCACACAACTCGCAGAAATTGTGCCAGGCATGCCTCGTGCACGCCAGACGAACGGGCTCAATGCGGCCGCTGTGCGGGCCATCGGGTCGGCGCGGGCCCGGCTCCAAGCACAAGTACAAGCACCGGCTGCCGCGCGGCATTTACATCAATCACGACGATCTCGTCGCCATGGCAACAGGCCCCCAGCCCGGGGACCCCCCGCAGCCGGGGCTAGTCAATCAGGGCGACGCCATGCTCAAAGCAATGGACAGGGAAATTATATCGCTCAAGAGACAAGTCCAGTCGAACAAGCAACAGCTGAGCGCGATGAAGCGTAAAGTGGGTGAAGGGACCGTTGAGGCTCTGCGGCCGGGTGAGCCCCCCGCCAAGATTAACTCGCGTTGGACTAGCGAGGAGCTGCGTATGGCCGTCATCGCTGTCAGGAAATATGGCAAGGACTTCGAAGCGATCGCCTCGACACTCGGCACGAAGACCGAGGCGCACGTTCGGACCTTCTTCATCTCGTACCGACGCCGCTACAACTTGGACCAGATGTTGCGTGAGCACGAGGATGAGAGGCGCAATAATTCACACCATATACAGAGCGGCACATCGAGCACAGATAATCCTGAAAGCACCACCGACGGAAACACCGATAATGGCACCGTATCCCCACCTAATGCTGGCAAAGAGGAAAAGACCGAAGTAGACAGCGAAGGCGTCGCGATCGGCGCCCCGGCGGAGCAGGGCGGCGCCCCCACAGCGCCCCTGCCGGCGCCCCCGGCCGCGGCGGCGCCCCCCAAGGCGCGCCAAGCCAACTGA
Protein Sequence
MVLAERSTDVRNGKRSRGPSPNGHGSPDSSSEDENVVPFAAEKIRVGRDYQAVCPELEPLEQRRPELTADRALLVWSPTAEISDPKLDEYITVAKEKYGYNGEQALGMLFWHKHDLNRASMDLANFTPFPDEWTVEDKVLFDQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDVVGENRNANTSTGGKRESGGSEPGGSDKESDNDEKRWTFHRGIVRGSTPSDRATLRASNSLQPQGENGGDQNKWCTVCGILCSQTTAHNSQKLCQACLVHARRTGSMRPLCGPSGRRGPGSKHKYKHRLPRGIYINHDDLVAMATGPQPGDPPQPGLVNQGDAMLKAMDREIISLKRQVQSNKQQLSAMKRKVGEGTVEALRPGEPPAKINSRWTSEELRMAVIAVRKYGKDFEAIASTLGTKTEAHVRTFFISYRRRYNLDQMLREHEDERRNNSHHIQSGTSSTDNPESTTDGNTDNGTVSPPNAGKEEKTEVDSEGVAIGAPAEQGGAPTAPLPAPPAAAAPPKARQAN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00018116;
90% Identity
iTF_01544831;
80% Identity
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