Zhep010034.1
Basic Information
- Insect
- Zelleria hepariella
- Gene Symbol
- -
- Assembly
- GCA_949319315.1
- Location
- OX439384.1:568398-580687[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-06 0.0071 16.4 0.0 7 35 83 110 79 115 0.88 2 2 0.00026 0.38 10.9 0.0 3 34 248 278 246 289 0.84
Sequence Information
- Coding Sequence
- ATGATCACCCCTGAGTCACTTTACAAACAACAccttataatattatttaaagaAATAAAAGGTGTGCGGACGTCCACGGAAATAGTGACGCGACACTTCATCGACATCCCAGCCGACCACGGAATACCGCTCAACATCCACGCACGACCACGGATCGTCGGCCGAAGACCCAACGCCATCGTCAACATAGAAACCGACGTCTTTCAAGAGAAATCCTACAAGCAATACTCATCCCAACACTTACGAGACGCGCTCATAGCTGTAAAGAAAGGTTACAGCGTCTACGCGGCTTCGAACAAGTACGGCGTGCCAAGGAAAACTTTGAGGAATTGGATGGAAAAGTATGACATTAAGAGTCAGTATTCGAAAGGGCAGTTCGCGATAGCCAACGTGCAGTGCCAATACGACAGCCCCTCCGACACGGACTCGGCGGCGGAGGGTGAGACGGCGGTGCGCCTACGCGCGGCGGCGCGCGACCACACCTACGACCGCGGCGAGGAGCCGCCCGCCTTCCTCATACACCAGCTCAACGTGGGCCTGCAGCCGCCGTCGAGCCAGCCGAGCTTCCCCGGCCCGTTCGTGGAGCTATCCCCCAACCTGGTGGGCGTGCCCCACTACCTGCCGGGGGCAGTCAACGTGATCCACCTCACCGACGGAAGACGGCTAAGCCACCCGCCGCCGAGCCCGGTGCCGCAGCCGGGGCAGGAGATCAACATGAACAAGCGCATCCGACGGAGCGAGCAGACCTTGCGCGCGGCTGCCGACTGCGTGAGCAGGGGGCTCACCTTCCAGACTGTCTCGGAGAAGTTCAACATACCCATCTCTACTATTAGGTTCTTCATGGCCCGTAAGGGTATCTTACCACGACGGCGTCGCGGACGGCATGGGCATCTGGTGCCCCCCTCAACCAGTCCTGAGCCCCCGTTCCACATGCAGCACTACAAGCTACCAGACATGTTGGCTCTAAAGCAGGACCCGGACGACGAACCAAACAGTAACCCATAG
- Protein Sequence
- MITPESLYKQHLIILFKEIKGVRTSTEIVTRHFIDIPADHGIPLNIHARPRIVGRRPNAIVNIETDVFQEKSYKQYSSQHLRDALIAVKKGYSVYAASNKYGVPRKTLRNWMEKYDIKSQYSKGQFAIANVQCQYDSPSDTDSAAEGETAVRLRAAARDHTYDRGEEPPAFLIHQLNVGLQPPSSQPSFPGPFVELSPNLVGVPHYLPGAVNVIHLTDGRRLSHPPPSPVPQPGQEINMNKRIRRSEQTLRAAADCVSRGLTFQTVSEKFNIPISTIRFFMARKGILPRRRRGRHGHLVPPSTSPEPPFHMQHYKLPDMLALKQDPDDEPNSNP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -