Zhep005916.1
Basic Information
- Insect
- Zelleria hepariella
- Gene Symbol
- bab1
- Assembly
- GCA_949319315.1
- Location
- OX439381.1:8046653-8048493[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-13 4.6e-10 39.4 0.0 4 45 352 393 349 393 0.92
Sequence Information
- Coding Sequence
- ATGTATCCGGCGTCTACTTGCGACCATCTTTTGCCAGAATCCCAATTCAGAAAAATGGGAAGCAGCGAAGGGCAGCAGACCTTCTGCCTGAAATGGAACCACCACAAGACCAACCTCGTGGAGATCCTCGAGGCTCTCATCAAGGTCGAGACCTACGTGGACTGCACGCTGGTCGTCGATGACCAGGTCACCTTCAAGGCGCACCGAGTGGTCCTCGCGGCCAACTCGCCCTATTTCCAATCCATCCTCGCCGACGTGCCGATGGATCACTGCAGCATCCTCTTCCCCGGTGTGAAAGACTTCGAGATGCGCGCGCTACTCGAGTACATGTACACTGGTGAGGTGAACGTGACGCAGGCGCACATCCCGCGCATCATGAAGGTGGCGGAGCAGCTGGAGGTGAAGGGTTTGTTCGACATGAGCGAGCTGCGGCGGcacgcgggcgcgggcggcggcgagcGCACCCCTGCCGCGTCCCCGCCGCGCGTGGTGCCCGCCGCGCCCTCTAGCGTATCGCCGCCTGCGCCCGCACCGCCCTCGCGCTGGCCGCCACCGCCCCCCTCTCTGCCTGCACTCTCCGCCGCGTATGACTCCGCCGACATGAACCCGCTCAAGCGCAAGAAGCTCTCCAGCATGCTCGCCATACGCGACACCCCCATCCTTAGGAACGTCCTCGCTCAAACGACACCCCCGGACTCTTCACAACCCGTCTCCCTTGTTTGCCATCCTATACCGCTACACGCCCCTCCACGTCTGCACTCTAACGGCTCAGCACACGAGATGGACCGACCGCCCAGCCCGCACCGGCCCTTCGACTACCGACCCCGCAGGATGTCCTCTCGCGCCTCCTCTCCGCACTACACACGCTCCGATCGCTCAGAAGATGCACATTCGCCCTACACTGAACGCTCATTCGATGACGACGCTCCTAGAACGTTTCACCCCTCACCACCACCTCCAAACTTTCAACAAGACGTGCGAGCCGGCCTCGCCCCATACGTTCCTCCTCAGCAAAAACCAGAATGGAAACGATACAAGCAATACACGAGATCTGATATAATGTCCGCTATAGAATGCGTCAGAAATGGTATGAGTGCTCTTCAGGCTTCGCGAAAATACGGCGTCCCTTCACGTACTCTATACGATAAAGTGAAGAAGCTAGGAATTACCACTAGCCGACCGATGAGCCGAGGAGTCAAAAGAGAATCGAATGGTGCGGCTTTCCCGTACGGACTCAGTGGTACGGGCAACAACGATGACCATCCCCCGTCTGCGCCTCTGATTGACGCGTCATTCCTGCAGCAAGCGTTAGAGGGTGCGACGAGGGATGGTGGTCGTGAGGCACTTCACGCGATGGCCCTGGCAGCGGCGGCGCACGCAGCCCTGGCGCCGCGGTCACCACCGCGAGTGTCGTCGCCGCCCTCACCGCGCTCGCCGCCCGCCGACGACGACCAAGTGGAGGACCTGTCGGTGTCGCGGCGCCGCGAGCCCGAGCCCCCCGCTGGCGTCATCATGCCACCGCGCAACTTTGCGCTCGACTGCAGCAGCGCCGAGCGAGACTGA
- Protein Sequence
- MYPASTCDHLLPESQFRKMGSSEGQQTFCLKWNHHKTNLVEILEALIKVETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMDHCSILFPGVKDFEMRALLEYMYTGEVNVTQAHIPRIMKVAEQLEVKGLFDMSELRRHAGAGGGERTPAASPPRVVPAAPSSVSPPAPAPPSRWPPPPPSLPALSAAYDSADMNPLKRKKLSSMLAIRDTPILRNVLAQTTPPDSSQPVSLVCHPIPLHAPPRLHSNGSAHEMDRPPSPHRPFDYRPRRMSSRASSPHYTRSDRSEDAHSPYTERSFDDDAPRTFHPSPPPPNFQQDVRAGLAPYVPPQQKPEWKRYKQYTRSDIMSAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTSRPMSRGVKRESNGAAFPYGLSGTGNNDDHPPSAPLIDASFLQQALEGATRDGGREALHAMALAAAAHAALAPRSPPRVSSPPSPRSPPADDDQVEDLSVSRRREPEPPAGVIMPPRNFALDCSSAERD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01010533;
- 90% Identity
- iTF_01545882;
- 80% Identity
- iTF_01561245;