Zhep011667.1
Basic Information
- Insect
- Zelleria hepariella
- Gene Symbol
- -
- Assembly
- GCA_949319315.1
- Location
- OX439385.1:7728225-7738177[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.1e-10 3.2e-07 30.4 0.0 4 39 140 176 137 180 0.89 2 4 2.7e-11 4e-08 33.2 0.3 2 39 192 229 191 232 0.92 3 4 7.6e-14 1.1e-10 41.4 0.0 2 45 247 291 246 291 0.96 4 4 1.3e-18 2e-15 56.6 0.0 1 43 298 341 298 343 0.94
Sequence Information
- Coding Sequence
- ATGCCCGGCTACGGCTTGCCTCATGTGAAATGCGAACCACCATCTGAATCAGACGAAGATGATAGCAATTCACAATTCACGCAGAATTTTGGTACACATCAGGAAGCGCCTTCGCTGGAGGAGTTGGGCGGGGGCGCGCCGGCGGCTCCGTCCGCGACCCCCGTGTGCGTCAAACAGGAGCCGCCCGACGGAGCGCCGCGCTCGCTCGAGACTCTGGAGCCCGCCGCACATACCAGCGCAGCGGCATTGGAGCTGTCTCTCATCAGCTCTGAAGAGATTCAGTCAGAGTTCATGCCGCTGATGGTCAAGGACGAGCCTGGATCTGAAGGAGAACAACACCACCTCAGCGGCTCCGACACGAGCGACTCATGCGGCGCTGACGCAACACGGAGCAGCCCAAAGAGTTGGACACAAAGCGACATGGACAACGCCCTCAGTGCCTTGCGGACGCACAACATGAGCCTGACCAAGGCTTCAGCCACCTACGGCATTCCCTCGACGACACTCTGGCAGCGCGCGCACCGACTCGGCATCGACACACCGAAGAAGGAAGGTTCTTCGAAGTCTTGGAGCGAGGCGGATCTGAGAGGGGCCCTGCAGGCTTTGAGGGCTGGCGCTATCTCCGCGAACAAGGCTAGCAAGGCTTATGGCATCCCCAGCAGCACCCTATACAAGATCGCGCGTCGCGAAGGCATCCGCCTCGCCGCTCCCTTCAACGCTGCTCCGACCAGCTGGCGACCTTCAGACCTGGAGCGCGCGTTACAGGCGATACGGTGCGGGCACGCTTCCGTCCAGCGAGCCTCCGCGCAGTTTGGGATACCCACCGGCACACTATACGGGCGGTGTAAGCGCGAAGGCATAGAGCTGTCTCGCTCCAACCCCACGCCGTGGTCCGAAGACGCAATGGGGGAAGCGCTCGAGGCAGTCAGgGTTGGGCAGATGTCCATTAACCAGGCGGCTATCCACTACAATCTTCCATATTCTTCACTCTACGGGCGGTTCAAGCGTTGTAAATATCCACAGAGTCCACAGCAGTCACAGCAGCCCATACCGGAGCAAGAACCCTCCGCTCCACCCCCCACCACCTACCAACAGTACCCCCCCGCAGGGCCCCCGGAGCACCCCCACTACCACCAACACCACATACCCACCATGGTCGAACATTCGCAAGTGCCGCATCACGAACTGATGGAGGCGCACGACCCGTCGCTGCTCGCGTACCACCAGCCTGACTCCAGCGACCATCAACATCAACAGCAGTTCAACGCGATGTACTACGGACAGAGCATCGCCACCAGTTGA
- Protein Sequence
- MPGYGLPHVKCEPPSESDEDDSNSQFTQNFGTHQEAPSLEELGGGAPAAPSATPVCVKQEPPDGAPRSLETLEPAAHTSAAALELSLISSEEIQSEFMPLMVKDEPGSEGEQHHLSGSDTSDSCGADATRSSPKSWTQSDMDNALSALRTHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGSSKSWSEADLRGALQALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTSWRPSDLERALQAIRCGHASVQRASAQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYPQSPQQSQQPIPEQEPSAPPPTTYQQYPPAGPPEHPHYHQHHIPTMVEHSQVPHHELMEAHDPSLLAYHQPDSSDHQHQQQFNAMYYGQSIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -