Basic Information

Gene Symbol
-
Assembly
GCA_949319315.1
Location
OX439386.1:17393709-17402364[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-16 4.5e-13 49.8 0.0 4 89 274 352 272 352 0.90

Sequence Information

Coding Sequence
ATGGACGAGGTCCTAGCCATCGGCGAGAAGGTGGTCCTGCGAGCGGACGACCTGCTCAGCTGGGTCTGCGCGGGCCAGGAGTGGCGATGGGGGCTCCGCGCGGTGTGGCGCGGCGCCTGCGCACCGCCCGCCGATCGCTCCGGTGACACGCACCCGCTGCACAAAGCGCGGCTGGATTTTAGCGATGTGGACACTGAAAAGGGAGCTATTGGGCTGTGGGTCTGCGCGGGCCAGGAGTGGCGATGGGGGCTCCGCGCGGTGTGGCGCGGCGCCTGCGCACCGCCCGCCGACCGCTCCGGCGACACGCACCCGCTGCACAAAGCGCGGCTGGACTTTAGCGATGTGGACACAGAAAAGGGAGCTATTGTGATAGACGAGAGCAGTCCGGGCGTGGTGGTGTTCTCATACCCGCGGTACTGCCGCTACCGAGCGCTGCTGTCGCGGCTGGAGGGTGCGCACGCGCATTGGCTTCGGCAGTCGCTCGTGGCCGCCCTAGGGGGGTATGCCGCCCCTACTGCCAACACTAGGATACTGTACTGCAGGGACACCTTCGACTACCCAGAGCTGGAGGGGCACGAGTTCGTGTGCAACCACCTCGCGCCCAAGCTGAAGGGGCGACCGCGcggccggcgccggcgcagggcGCGCTCTCGCTCGCACTCGCGCACCAGCCGCTCGAGCGAGAGCGACGGCAAGCGGTCGCCGAGCGAGGTACAGCCGCCTCCGCACCCGACACCGCGTCGCCTCTCGCTGCGCAACGGGAAGACCAGCGACGAGGAGGACGACCGGCGGCGCGCGGAGGAGCAAGCCTTGGACAAGGGCTTCATGCGGCAACTGAAGGCCTTTTACAAGACTCGCGGCGAGTCCTTCCGGATGGCGCATGGGCTGAAAGAACTGTCCCTCCGAGCTTTATACGAGGGCGTGTCCCGACGTGGCGGCTACACGACGGTGACACGACGGCGCGCCTGGCGCTCCGTCCATTCAGCGCTGCGGCCGCGTCCCGCTGATCCGAGCTCCACCAAGACTAACTATGAGAGGTTCCTCCTAGCCTACGAGAATCACCAAAGACGCACGGGCACCACGATCTTCAACTGCAGCTCCAAGTCGTCGACCCAGCCCGCGCCATCCATCGTCGACACCATCGACGTGACCGACTCGCCCCTTCGAGAGACCATCACGAAGCTACCCTCGCCAGCCAAGCGCCTCAGAACGCCCTCCCCGCAACTGAAGGCCGAAGACCTCAGCGAGACGAAAAAGGAGAACAAGGAAAACCCCGCCGAGACAATAAACAGAGAGTTCCTAGACTCCCTTCCGCCTAAAGAGGAGATAAAACTAACTCTAAAACCCGTCGAGTTACTGCTTGACACGAAAAAGGAAGTGAAAATAGACACCAAATATCTCACGTTCCCTGAAGACTTGAGAAACAATGAGATGATAAAGTCGTTCGCGGAAGACAACAGCGCGCTTATAGCGGAGATAGCCGACAAGTATAATTTGAAGGATTCCAGTAAGATTCTGGATGAGATAGCGAGTAAGCAGGGTCTGAGCGATGGCAGTACCAAGTTTCTGGCGGAGTTGGCGCAGAAGCTAAATTTAGcaacgggttgttcttcttcttag
Protein Sequence
MDEVLAIGEKVVLRADDLLSWVCAGQEWRWGLRAVWRGACAPPADRSGDTHPLHKARLDFSDVDTEKGAIGLWVCAGQEWRWGLRAVWRGACAPPADRSGDTHPLHKARLDFSDVDTEKGAIVIDESSPGVVVFSYPRYCRYRALLSRLEGAHAHWLRQSLVAALGGYAAPTANTRILYCRDTFDYPELEGHEFVCNHLAPKLKGRPRGRRRRRARSRSHSRTSRSSESDGKRSPSEVQPPPHPTPRRLSLRNGKTSDEEDDRRRAEEQALDKGFMRQLKAFYKTRGESFRMAHGLKELSLRALYEGVSRRGGYTTVTRRRAWRSVHSALRPRPADPSSTKTNYERFLLAYENHQRRTGTTIFNCSSKSSTQPAPSIVDTIDVTDSPLRETITKLPSPAKRLRTPSPQLKAEDLSETKKENKENPAETINREFLDSLPPKEEIKLTLKPVELLLDTKKEVKIDTKYLTFPEDLRNNEMIKSFAEDNSALIAEIADKYNLKDSSKILDEIASKQGLSDGSTKFLAELAQKLNLATGCSSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-