Basic Information

Insect: Zele albiditarsus
Gene Symbol: Bcl11a
Assembly: GCA_958496275.1
Location: OY292414.1:11794950-11802039[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.48 41 4.8 0.4 2 23 164 186 163 186 0.93

2 6 4.7e-07 4e-05 23.7 1.6 1 23 557 579 557 579 0.99

3 6 3.3e-05 0.0028 17.9 0.6 2 23 598 620 598 620 0.97

4 6 1.1e-07 9.3e-06 25.7 2.9 2 23 822 843 821 843 0.97

5 6 7.8e-06 0.00066 19.9 3.3 1 23 849 871 849 871 0.99

6 6 3.5e-05 0.003 17.8 0.4 1 22 879 900 879 900 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.48	41	4.8	0.4	2	23	164	186	163	186	0.93
2	6	4.7e-07	4e-05	23.7	1.6	1	23	557	579	557	579	0.99
3	6	3.3e-05	0.0028	17.9	0.6	2	23	598	620	598	620	0.97
4	6	1.1e-07	9.3e-06	25.7	2.9	2	23	822	843	821	843	0.97
5	6	7.8e-06	0.00066	19.9	3.3	1	23	849	871	849	871	0.99
6	6	3.5e-05	0.003	17.8	0.4	1	22	879	900	879	900	0.97

Sequence Information

Coding Sequence: atgaattcaatgaaaactATATTTTCAGCGGAGCCGTCACAAGGAGTAATAGCTCCTGATACTGTCCAGTGCGGTGGATGCCGCGCCTCATATCCACTCGCTGATATAGTTCGTTTTATCGAGCACAAGGTCCACCACTGCCGGAGCAATCTTCAAAGTTGCCATAGTCCAGCGCCTGCATCCGCCCATGAAGATTCGGATCCGGAAGATGCACTGGCTCTCAAATCCACTGACCAAGAGAAACTCACCTCAGTGCCGAGTATATCCGcaccaataaataaacgtaCAAGCAGAGTTGAAAGTCCACCTACGCCGCAGGGCAGCGCACCAGACAGTGGTAGTCCAATTGAGCTTAGAGCGAGTGCGAGTTCAACTCCCAAGAGACGCACTGAGAGCAATCacgaagagaaagaagagcTACCAAAGAAACCCAAGACAGAATCCATCGATGCTGATACCAAATCCATCAATTCCGAACCACGAAGTATGGTATGTTGTCAATGCTCACGTCAATTAAACTCAGCGTGGGAACTGATACAGCATGCGCAGAATGTTCACGGAACAAGATTATACGGCTCTCCGTGCTCAATGGCAAACTCATTGTCTAATACACCAGCGCCAAGTCCACCGACGCCAACACCTagtattcttcatcatcaaagTCCATCCAATCACTTAAACATCAGTGGTAAGTCAACAGGAAGTTCATCGGCTGCCAATTCCTCCGGGGGAACGAATTCCAGTGGCAATAGTAGCCGTCAACAGCACCAGTCCTCAGCTTCTCTCAAGGTCGATCCACTTCACAGCTTTCTCGGGCTGCCACAGCACTTGGAGAGGAGTTTCCCCCCTATGTTTAGGCCAGACTTACTGGCTTTGAGCTCCATTGCTAGCTATCCTGGTCTACAAAATTTCCAAACAGCTACAAGAAATCTACAGAACCTTGGGGATCCGTTGAGGGGTATGGATGGACTGAACCTTGGCGATTCATTGATGAGAAGTTCATTGGATTCGCTCAACAATGCAAGAAGTCTTGCTAATCTAACAGAATTGTCACATGGCCGAGGTTTAGCTAGTCAGGGACATCAACCTCAATTAGAAGCCAACCTGGATTTTTATTCTGCGCGCCTAAGGAGCCTCGCTAATCCGTCCTTAGGCGCGGCTCCATCGAATCCATCTATCAATTCTGCTTCGATTCTCTCTGTAGTTACTGCTGTCCAACAACAACCACAGCAACatccactaccaccaccaccaccagcaacagcagcagcaccaccaccaccaccaccgccaccgccgccgccaccaccaccactgccaccaccaccaccacaatcACAATCACAATCACAACAccaacatcaacatcaacatcaacatcaacatcaacatcaacatcaacatcagCACCAGCATCAACAccaacatcaacaacagcagaagcagcaacagcaaccaCAACTTAAACATTCTGCAGACCTGAGATCAAGTCCAGCTTCAACAAATCCACCGAATATTACAATTCACAGTCATgcacaaaaagaaaattcaccaCCATGCTACACTCAAAGTCCAATTGgacataacaataataattcaacagacAGCGATAAAGCTAGTCCACCAGCTGTGTCAACTCCAATAATCTCCGATGAAATCGAAACTATTTACACTTGTGAGGTTTGcgagaaaaaatttcgatttcaATCGAATCTAATTGTTCATCGGAGAAGTCATCAGGAAAAGGAGAGACAGTTCCAAGAGTCGACTCCGGAGAGTATTGGAATTGCACGATGTGAAGTGTGCGGGCTCGAGCTCACAAATTTTTCCGAGCTTCGAAAACATATGAGAAAGGAGCATCAAGAATCCATTAATGTTGCGAGTCCACAAGGAAGCGTTGAGACGGTACCTGATGATGGATCTAGTTGCGATGAAAATATGGAGCTAGACGATGTAGATGACAATGAACAGaaagacaatgaaaatattgaggaAAATACCCCGGAAGACTTGAGTACAACGCAGAGTCAAGCTAACGATGAGAGTAGTGGTAGTCGAGCTGAGCCAAAGCCAAGTCTTGTTGGTGATCTCATGGAAAAATTTGGCTTGAACAATATTGCTCAGTATTCAGAAGCTTACCGACAAGCACTCCAAGAGAATCATCGTGGTGGTTTTCTCAAGTCTGAACATACTGTTAATCTCACTAACtcattgaacaataataaagaaaaagaaagtgcACTTTCACCAAGCAACTTTAATTCCTCAACGACCACCAATATATTTTCCGGTCAAGGTTTTGCCCGAAACGCCACATCAGATTTTGGTGGGTTATGGTTACCCAGTCCACACTACCTGGAAAACAGTGAATTCCGTAAAGTGTCCAAAGCCACAACATCCAGTCTCACTCTTCAGGGTTTACCAAGTCCACTTTTGAAAAAAGAACGGAGTGGCAGAAATGATACATGCGAATATTGTGGTAAAGTCTTTAAAAATTGCTCAAATTTGACTGTCCATAGACGATCACATACAGGTGAAAAACCATACAAGTGTGAACTATGCTCGTATGCGTGTGCCCAAAGTTCAAAACTAACTAGACATATGAAAACTCATGGTAGACATGGCAAAGATACGTATAAGTGTCGTTTTTGTGAAATGCCATTTTCAGTACCGAGCACGCTGGAAAAACATATGAGAAAGTGCGTTGTGGTGGTTCAGCAGGGGCCGAAATTGTCATTACCCTATCCCGGAAGTCAAGACGAAGATTCGTCGCTCAGCACCAAGGATACTTGA
Protein Sequence: MNSMKTIFSAEPSQGVIAPDTVQCGGCRASYPLADIVRFIEHKVHHCRSNLQSCHSPAPASAHEDSDPEDALALKSTDQEKLTSVPSISAPINKRTSRVESPPTPQGSAPDSGSPIELRASASSTPKRRTESNHEEKEELPKKPKTESIDADTKSINSEPRSMVCCQCSRQLNSAWELIQHAQNVHGTRLYGSPCSMANSLSNTPAPSPPTPTPSILHHQSPSNHLNISGKSTGSSSAANSSGGTNSSGNSSRQQHQSSASLKVDPLHSFLGLPQHLERSFPPMFRPDLLALSSIASYPGLQNFQTATRNLQNLGDPLRGMDGLNLGDSLMRSSLDSLNNARSLANLTELSHGRGLASQGHQPQLEANLDFYSARLRSLANPSLGAAPSNPSINSASILSVVTAVQQQPQQHPLPPPPPATAAAPPPPPPPPPPPPPPLPPPPPQSQSQSQHQHQHQHQHQHQHQHQHQHQHQHQHQQQQKQQQQPQLKHSADLRSSPASTNPPNITIHSHAQKENSPPCYTQSPIGHNNNNSTDSDKASPPAVSTPIISDEIETIYTCEVCEKKFRFQSNLIVHRRSHQEKERQFQESTPESIGIARCEVCGLELTNFSELRKHMRKEHQESINVASPQGSVETVPDDGSSCDENMELDDVDDNEQKDNENIEENTPEDLSTTQSQANDESSGSRAEPKPSLVGDLMEKFGLNNIAQYSEAYRQALQENHRGGFLKSEHTVNLTNSLNNNKEKESALSPSNFNSSTTTNIFSGQGFARNATSDFGGLWLPSPHYLENSEFRKVSKATTSSLTLQGLPSPLLKKERSGRNDTCEYCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRHGKDTYKCRFCEMPFSVPSTLEKHMRKCVVVVQQGPKLSLPYPGSQDEDSSLSTKDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00452179;
90% Identity: -
80% Identity: -