Basic Information

Insect: Zele albiditarsus
Gene Symbol: Glis3
Assembly: GCA_958496275.1
Location: OY292409.1:3460886-3464138[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 8.3e-05 0.0071 16.7 0.6 1 23 301 326 301 326 0.97

2 5 0.32 28 5.4 0.1 5 23 366 386 360 386 0.79

3 5 1.4e-06 0.00012 22.2 1.0 2 23 393 416 392 416 0.97

4 5 0.0028 0.24 11.9 1.8 1 23 422 446 422 446 0.95

5 5 2.5e-06 0.00021 21.5 0.2 1 23 452 476 452 476 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	8.3e-05	0.0071	16.7	0.6	1	23	301	326	301	326	0.97
2	5	0.32	28	5.4	0.1	5	23	366	386	360	386	0.79
3	5	1.4e-06	0.00012	22.2	1.0	2	23	393	416	392	416	0.97
4	5	0.0028	0.24	11.9	1.8	1	23	422	446	422	446	0.95
5	5	2.5e-06	0.00021	21.5	0.2	1	23	452	476	452	476	0.96

Sequence Information

Coding Sequence: ATGCACCTGAAGGATATTTACAAGAGCAATCAACAAGATATAAGGTTCATTTCTTCGTCAATGGACAGTCACGAGACATTCAGTATTGGTGAACCCATAACTCCAACTGTTGTTAATGACAATGGATTTTCTTGGGACATGTCATCGGGTTTATCGACATCTAGACCTGGTAGCGGTGATTGGGAGCAATTGACGGTATTTGAATATCCACCCAGCAGTCGTCCTACACCGCTcacaattggaattaattcgCCGGGTAGTACAGGAAGTGAAGTAGCGACACCGACATCGTGGGCTGGCGGTTTTCAAGGCAGTGATTATTGCGAATATTCTAACGATGAATTGACTGATAGTAATACATGGACAAACCAAAGACTGCCGTCTGTCAATAcggcattttcattttcacgtaATTTTTGCAATGCCACCAATTACTTTGAGGATCAAAATCCAGCTCAATTTCAAGAATTTACCAACGATTATCATGAGTATCAGGATTGCACTTACGGTGAAGAACTTAGACTGACACTACCTACAAATGTTGATCTTCAATCACAGTTGGACGACACACAGGATTTAAGTTCACTACAAGCAGTTGATGAATTTGATCTTAGCCTGATTCGCGGTGATCCTACGACACTTTTGCAAAATGATACATCATCAACGTCAGTCTCGTCATCATTTCTAGATGACCAACGTCATGATAATTATGACACATTAAATTCGCAGTCTTATCCAGTTGGTCATTTGATGACTGGTCAAACTTCCAGTGTCAATTTGCCGAGTTTTAAAACTAATGAAGATATTCCGACGGGAACATCTAATCAAGTTGTAATGTCACAGCGAGAAGGCTTGATTTTGGATAAGCGCAATACACCCGATGtcaatgGTTCATCAAATTACCAGTGTCGTTGGATTGACTGCGGCTGCTCTTTCAGTGAACAGGAGGGTTTAGTAAGACACATAGAGAAGCGTCACGTCGAATCCGCGAGTAATTCGCATGGTGGAAGCAAAAGAGCTCACAAAGATAAAGATAAAGATGCAACGGGTGGCTGTAATAGTTCTGGTCAAGATGAATTCGCTTGTTTATGGCAGGGTTGTCCCCGTGCCCGACCATTCAACGCAAGGTATAAACTGTTGATCCATATGCGTGTTCACAGTGGAGAAAAACCCAATAAATGCCCGTTTACAGGGTGTAAAAAAGCTTTTTCGCGGCTTGAGAacttaaaaattcatcaaagaTCGCACACAGGCGAGAGACCGTATGCTTGTCAACATCGTGGATGTATAAAAGCTTTCAGCAATAGCAGCGACCGTGCCAAACATCAACGAACACATTATGATACGAAACCATATGCTTGTCAAGTAGCTGGATGCGGTAAACGATACACTGATCCATCGAGTCTGCGTAAGCATGTGAAAAATCACGTTGATACATCGAGACCATCATTTGACAACAATTCCACACAAAAACAGTTGCTGTCTGATAAATCAACACCGACCAATGATTCTAACAATTCTGAAGTCTCGGTCGCATTAAATTGTCGTGTTTACAAAAATCCGGAGTTCCACAGTGAAGAAACATTCTCTGAAAAATGGTCTACTGGATTAGATGTTCTCGAAGACAGTCAACCCGAATTTGTACCATTTGAATCTGTAGGTCGATTACTCGGTGACGACGAAAATTGCATAgCATATGACAGTGGTATGGCTGACTTTCAAGAATTAAGTACGGAAATTGAACGACAATTTTTGGATCTGAGCAACTTGGATGAAACTGAATTTATAGGTGGATaa
Protein Sequence: MHLKDIYKSNQQDIRFISSSMDSHETFSIGEPITPTVVNDNGFSWDMSSGLSTSRPGSGDWEQLTVFEYPPSSRPTPLTIGINSPGSTGSEVATPTSWAGGFQGSDYCEYSNDELTDSNTWTNQRLPSVNTAFSFSRNFCNATNYFEDQNPAQFQEFTNDYHEYQDCTYGEELRLTLPTNVDLQSQLDDTQDLSSLQAVDEFDLSLIRGDPTTLLQNDTSSTSVSSSFLDDQRHDNYDTLNSQSYPVGHLMTGQTSSVNLPSFKTNEDIPTGTSNQVVMSQREGLILDKRNTPDVNGSSNYQCRWIDCGCSFSEQEGLVRHIEKRHVESASNSHGGSKRAHKDKDKDATGGCNSSGQDEFACLWQGCPRARPFNARYKLLIHMRVHSGEKPNKCPFTGCKKAFSRLENLKIHQRSHTGERPYACQHRGCIKAFSNSSDRAKHQRTHYDTKPYACQVAGCGKRYTDPSSLRKHVKNHVDTSRPSFDNNSTQKQLLSDKSTPTNDSNNSEVSVALNCRVYKNPEFHSEETFSEKWSTGLDVLEDSQPEFVPFESVGRLLGDDENCIAYDSGMADFQELSTEIERQFLDLSNLDETEFIGG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00997301;
90% Identity: -
80% Identity: -