Zalb001729.1
Basic Information
- Insect
- Zele albiditarsus
- Gene Symbol
- -
- Assembly
- GCA_958496275.1
- Location
- OY292408.1:16630815-16637559[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 1.1 94 3.7 0.0 2 21 150 169 149 170 0.92 2 22 0.028 2.4 8.7 3.8 2 23 177 199 176 199 0.96 3 22 0.014 1.2 9.6 7.8 1 23 209 231 209 232 0.95 4 22 4 3.4e+02 1.9 0.2 5 20 545 560 544 561 0.91 5 22 0.57 49 4.6 0.8 2 23 571 592 570 592 0.96 6 22 0.27 23 5.6 0.8 1 20 619 638 619 640 0.86 7 22 3.6 3e+02 2.1 0.1 2 15 640 654 639 657 0.90 8 22 1.6 1.4e+02 3.1 1.2 2 21 708 727 707 728 0.87 9 22 7.3e-05 0.0062 16.8 0.0 1 23 736 759 736 759 0.98 10 22 0.13 11 6.6 2.7 3 23 770 791 769 791 0.90 11 22 0.088 7.6 7.1 0.4 1 21 812 832 812 833 0.91 12 22 0.022 1.9 9.1 1.7 2 23 841 863 840 863 0.95 13 22 4.4e-06 0.00038 20.7 1.2 1 23 874 897 874 897 0.97 14 22 0.0013 0.11 13.0 0.0 1 21 923 943 923 944 0.95 15 22 0.05 4.3 7.9 8.5 1 23 951 974 951 974 0.96 16 22 0.027 2.3 8.7 0.1 1 19 1055 1073 1055 1076 0.95 17 22 0.00087 0.074 13.5 0.7 1 20 1160 1179 1160 1181 0.95 18 22 6.7e-05 0.0057 17.0 2.5 1 23 1188 1210 1188 1210 0.99 19 22 2.9 2.5e+02 2.4 4.1 1 21 1222 1242 1222 1245 0.84 20 22 0.00082 0.07 13.5 0.2 3 23 1435 1456 1434 1456 0.97 21 22 0.2 17 6.0 0.2 2 23 1532 1554 1531 1554 0.94 22 22 0.0079 0.67 10.4 4.7 2 23 1591 1613 1590 1613 0.95
Sequence Information
- Coding Sequence
- ATGGCACGTGTTGAGATCTACAATGGACATTCATCAGTTGTTCCTGTATTATTTGCAACATATGATTCTCGGTGGAATACTTCGGGTCTGGATATGGTGAGAATAAAAGAGGAACCGCTGGACAGCGATGCGAATGACGATGAACATCTACAACATAATGCCAGTAATGATGATGCAACGACAACACGAGACTctcaaacaattaatcatgTGGACACAAAAATGACGAAGCCAAACATTATTATgacatcaaacaaaaatgatacgACTGAAGGTTCGTCATCAACATgttcaaacataaataaaaatcatgtaGATGATTCTAAAATAATTAGTAATGGTAGTAGTATTAAGCGGACGACTAGGATAACTAATCAGGGCCATgttgagaatgagaataatgtGATTGATAGAAGGTTGCGCACGCGTACTAAATCTAGCCTCGTAGAATGCGACATCTGTTATGCAACATTTCCAGAAGGAACGGATTTAAGatcacataaaaattattatgctaGGGGTGAATTAACATGTCACTTATGTAAAATACACTTTGTTATACCTATACATTTAACATCCCATCGACGTTCAGCTCATCGAGGCGACGATTGGAGTCgctttaaatatgaatgtaattattgTAAGCTTGGATTTGTGAAAAAACATTATCTACAACAACACATATTCCAccatcataatataaataagattCTCAATAGTAAAAGTATCCGTCGTCGACTAAAAAGTCGTAATATTGCATTAGAAAAAATGCGTCTCAACTCGAAGTCATGTGATCaccaacaaaacaaaagaaaacgcGATGATGAAGTGATGGTTGGACCGTTgcgaaaaaaattggcaatggCCAAAAAACATGGTAAAATTGATTTACCATATCAGGTTaaaaacgatgaaaataatcaatttaatagTGATGACCAAACTAATGACATAATTTTACCGCAAAAATccatttcaaataatcaaaataacaatagtaaaaataataacggtAGTGCTTTATGGAAATCATCAGTCCAACCACCACTAGTGAAAATTTGTGCGGTACCTAATGAAGTTGAGGCTTTATTGAACGATTGCGAAAGTAGTGATGAGAATTTCAGTATCGACAGTGATGTCAGTAGTAGTAGCGATTCCGAATTGAGTGACACAACATGCTACATGccgatgaaaaaatatagctTACGTCCGACAACAAGCAGATTTTCGAGTTCTCAAACTTCAATTCGTTCGACGAAACGTAAATGGGCAATATTACGGAAGCGTTTCAACTGTCGCGATTGTCAGGTTCGATTGGAACGGTTGAGTCTTCCATTGTCAATCGATTATGAATTGACAAAAGATATTTCGGATATTGGTGATACTAAGGAGGACGAaactattcaaattaattctagGCCAACAGTTGGCatggaattgaaaaatctTGAATTGGCTCTAAAGAAATTGCACGACGTAAATCATGGACATGATCAAACTCCTATTGAAGAGGAGCAGAGTTTATTGGGAGATATACAGTCATCAAATGAACCAACAAATGCAGTATCACAGCCATCTGAAGATATTCCCATTACGAATTCATCTACAAGtagaatgttatatatatcGAGTTTATGTCAAACTAGATATaccactaaaaaaaaattagtttatcattatttgtgcTTCCATACAAATCCACAGTACCAGGAATGCGCAGTGTGTAGATCACGATGCGCCAATCTTACTGAATTAACGGAACATTTAATGCAGCATTGCATTGAAATACCGGAATCATTACAAGAAGAATCGCCAATCGATCCCAAAGAATCGTGCGAAAATtcgaaagagaaatatatgtgtaaaggATGTAAAAAGAAGTTTTGGTTGGTATCAAGTTTAAAAGATCATGAACAACGATGTGAAATGATATGTgagaaaagagtgaaaaattcTTCGAATAATCATCAGAGCGACGATGCAACTATTTCGGATGAACCATCAGATAGTATTTTAAGAACACGATTGAGCCAGACAAACATTGATAGTGATCatcatgatgataatgatgatgatgcacaATCAACGCAAGAACCCGATGACCAAATATCAATATCGCTTGAATGTACCGTCTGTCATACAAAATTCCAGAATGTGACAAAATATTTAGAGCATAATAGGAAATATTCGCTTGGGATAGGTAAATATTACTGCAATCGTTGTGGTGTACCTTTTCCATCGCCCTCGTTATTAGGCGCACACACGAGAACAGCACACGAGTTCAACAAGTCATCGCCGGATAATACTTGTATTATTTGTGATCAAGGCTTtcgtgaaaaatgtttattgcgACAGCACATGTTGCACATACATAATGACGAGTTGAAGGTTGATCCAGTAATTGGTGCACCAAGAACAAAATGGAATCATGAACATACATGTCATATTTGCAACTTAATATTTCCAGATCGTGTACGTTACGTTGAACAtttaatgtattattatgaCGACGATATTATTGAGTGTTCAATTTGTCATGAAACATTTTCGGGAAAATACAAAGCACTTACTCACAAAAAGAAAGTACATGACACGGAAGAAATGCAAAGAGAGCACATGTACAGTTGCAACATTTGTAACGAAGGATTTATTCGTTCATCAGACTTATATTCACACATGCGTCACGTTCATAATACCAACATCGAACCAGTAAcaaatatatcgataaataaaaataaacaggaGACTAATCGAcatggaattttatatatgtgccGAGTTTGTGATGAGGTGTTTGGTACAGCAGCGCAATTGACGGATCATCAGTTAGAGTATTCCAATACTGGTAATCATACTTGTCTCCATTGTTCACGAAAATGTAAAACGCGTACGCTATTGGAAAAACACATTAAATTAACTCACAGTGGTCCACCTCGTGGCGATCAGGTTAAGTGCCATTCATGTGATGAAATTTCagaatcaaaattatcatgGCATTGtcatttgaaacattttcatattttaccaATTACAAATTTACGACTATCGAGAATCTGCACAAGTGGAACTTATTCAGTGGAACGTGGAGTTGAACAAATTACTGTTGTCAATGAAACGGAAAATAACAGTGATCCACGTACGTCTCATCCGATAGGAATAGAATATACGTGTGCGCTGTGCGATATGCAATTCATGAACAGTATGGATTTAAAAACTCATTCACTCAATTTTGGTAATACATGTATTCATAGTAATCCCGAGATTGTGAATACGAATTTTTCAATCGCCAGTATTTATTCCGTTAATTTGGAAGATTATGAAAAGTTGTGTAATGCTAAAGATGATGGTATTAATTCCATTAGAATGGAtggacaaaatgaaatatcagaAATCAAAGATAATGATACAGAATTTAGTACCATTGATGATACAAAGAAAATGAGTGTAATTAGATCTTTCGATACGTTAAATGCTCAGTACAGATGTGAAATATGTCTAACAAATTTTCCATCTCGTAGTACTTTGACAAAACATAGAACAAAGTATTCGAATACCGGTGATTATGAGTGTGAAATTTGTCATAGAAAATTTCGAAACATTGtacaatatcaaattcatattaagaaacatgaaaatagaaaacgTGATGTTCAGGTGCCATCACATTATTGCAAAACGTGCGATGAAAAGTTTGCTTCAGAGAACTCGAAGAGATATCATTTTGCTCACATCCACGGTGTCTTATTGAAATCACTTGCGTCCGACAATAATGAACGACGTCAGTCTACACGTCAACAATCAAAGCTAATGCACCAAACAAATTTAGATACATTTATTACACGAAATCcagatgatgataaaaatctaAATGAAACTTCTGGCTTTATTGAAATGCATTCGAATGACGAAATAACTGCAAATTCAGATCTGAATAttgatgcaataataaattcaggTACTATGATAGAGTCTGAGCCGCCACAAACTACATTGACTGATATCCAAATAGGCCGGtctgaaataattgaacatacACCTAAAACGACAAACTCATTACCAGTGGTTGTTGCtgacaattcaataaatgaaactgGGGAAAAAATACTTGAACGTGTAGAAATACAAAAAGGAATTATTGAAGTaccacaaaaattaattgaagggCAAAATCAAATTGTGGATACCGATATTATAGAAGTGGAACGTGTGGTAGCAGGACAGGAGATAGAAATTGTACtagaggaagaagaaataatagaaGTGGAAGACGTTGGTACGAGCGAGAAAACGACTCGGGGATTATGCGACATTTGCGGGAATGCGTTTATAAATCGAAAGGAATTGATCgatcatcaaaaaaattcccatGACATTGAACTGATTATAGATACATTAAGTGATACACAGGAAGAatacattgatattgaattgataagtGATGATGAAGTACAATATGACGAACCATccaaaaataatgacaaaactGACATTGACATTATATTTGACGGTACTTCTGTGTGTGATAACAGTAATACATGCACGAGTACGCCGCCACTGAAacctcaaaaaaaattttcaagaaaaaatcaaCTGACGTGTAGAATTTGTGGttcactatttttcaatttaagtTCATTGGGTGAGCATTTAGAGAAACAACATCAGACTGATTCACCAACAAAAGaagataatattcaaaatccGCGTGTATCAAGTTCGAGTAAAACTTGCAATACAACCGGACGAACAGACTTTCGTCATGTGCAGTTGTGTTGTAAATTTTGTGGAAAACAATTTTCCGAACATCAGTatttatatgcacacatacaaAAAAGCCATAGAAATCAAGTTGCTGTAACTGTGGCCCcgcaaaaaaaattgggacTACCACCAGATAAAACTGATGATATGCAAAATAATTCGCAAAATGACGAATATATCAATGCCAAACAATCAAAAGTGGCGGTAGTCAAAACTACAGAtgctatgaaaaaaattgttgacaaTGTAGTTTTAGACGACAGACCACAGTCTGAATTCGATACATCACAAAATTCGATCAGTCGAAATTCTCGTCGATTCACTCGTCTCATTCCAATTGCCAAATTAATTAGAACTCTTCATAATGGACACCTACTTCCAAAACCTAATCAAGTTCACAATAATAACATGTCGCGATAA
- Protein Sequence
- MARVEIYNGHSSVVPVLFATYDSRWNTSGLDMVRIKEEPLDSDANDDEHLQHNASNDDATTTRDSQTINHVDTKMTKPNIIMTSNKNDTTEGSSSTCSNINKNHVDDSKIISNGSSIKRTTRITNQGHVENENNVIDRRLRTRTKSSLVECDICYATFPEGTDLRSHKNYYARGELTCHLCKIHFVIPIHLTSHRRSAHRGDDWSRFKYECNYCKLGFVKKHYLQQHIFHHHNINKILNSKSIRRRLKSRNIALEKMRLNSKSCDHQQNKRKRDDEVMVGPLRKKLAMAKKHGKIDLPYQVKNDENNQFNSDDQTNDIILPQKSISNNQNNNSKNNNGSALWKSSVQPPLVKICAVPNEVEALLNDCESSDENFSIDSDVSSSSDSELSDTTCYMPMKKYSLRPTTSRFSSSQTSIRSTKRKWAILRKRFNCRDCQVRLERLSLPLSIDYELTKDISDIGDTKEDETIQINSRPTVGMELKNLELALKKLHDVNHGHDQTPIEEEQSLLGDIQSSNEPTNAVSQPSEDIPITNSSTSRMLYISSLCQTRYTTKKKLVYHYLCFHTNPQYQECAVCRSRCANLTELTEHLMQHCIEIPESLQEESPIDPKESCENSKEKYMCKGCKKKFWLVSSLKDHEQRCEMICEKRVKNSSNNHQSDDATISDEPSDSILRTRLSQTNIDSDHHDDNDDDAQSTQEPDDQISISLECTVCHTKFQNVTKYLEHNRKYSLGIGKYYCNRCGVPFPSPSLLGAHTRTAHEFNKSSPDNTCIICDQGFREKCLLRQHMLHIHNDELKVDPVIGAPRTKWNHEHTCHICNLIFPDRVRYVEHLMYYYDDDIIECSICHETFSGKYKALTHKKKVHDTEEMQREHMYSCNICNEGFIRSSDLYSHMRHVHNTNIEPVTNISINKNKQETNRHGILYMCRVCDEVFGTAAQLTDHQLEYSNTGNHTCLHCSRKCKTRTLLEKHIKLTHSGPPRGDQVKCHSCDEISESKLSWHCHLKHFHILPITNLRLSRICTSGTYSVERGVEQITVVNETENNSDPRTSHPIGIEYTCALCDMQFMNSMDLKTHSLNFGNTCIHSNPEIVNTNFSIASIYSVNLEDYEKLCNAKDDGINSIRMDGQNEISEIKDNDTEFSTIDDTKKMSVIRSFDTLNAQYRCEICLTNFPSRSTLTKHRTKYSNTGDYECEICHRKFRNIVQYQIHIKKHENRKRDVQVPSHYCKTCDEKFASENSKRYHFAHIHGVLLKSLASDNNERRQSTRQQSKLMHQTNLDTFITRNPDDDKNLNETSGFIEMHSNDEITANSDLNIDAIINSGTMIESEPPQTTLTDIQIGRSEIIEHTPKTTNSLPVVVADNSINETGEKILERVEIQKGIIEVPQKLIEGQNQIVDTDIIEVERVVAGQEIEIVLEEEEIIEVEDVGTSEKTTRGLCDICGNAFINRKELIDHQKNSHDIELIIDTLSDTQEEYIDIELISDDEVQYDEPSKNNDKTDIDIIFDGTSVCDNSNTCTSTPPLKPQKKFSRKNQLTCRICGSLFFNLSSLGEHLEKQHQTDSPTKEDNIQNPRVSSSSKTCNTTGRTDFRHVQLCCKFCGKQFSEHQYLYAHIQKSHRNQVAVTVAPQKKLGLPPDKTDDMQNNSQNDEYINAKQSKVAVVKTTDAMKKIVDNVVLDDRPQSEFDTSQNSISRNSRRFTRLIPIAKLIRTLHNGHLLPKPNQVHNNNMSR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -