Basic Information

Gene Symbol
dnajc2
Assembly
GCA_958496275.1
Location
OY292408.1:5187687-5189916[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.6 5.5e+03 -2.5 0.1 6 18 336 348 336 350 0.88
2 3 2.8e-05 0.023 14.7 0.0 3 33 443 477 442 489 0.84
3 3 7e-13 5.9e-10 39.0 0.1 2 44 558 605 557 607 0.87

Sequence Information

Coding Sequence
ATGTCTGAAAATTATCCGGACAACGATTGCATCGTTTACAATACAATATCACCGcttaaaaaagtaaaaatctATGTGGCTGGACCATCGGTATTACACGCGATAGCACACACAAAACTTCCAACTGGATTTGAGAGAGATTTACTAAATATTCAAACACCTGAATCATCAGATGGTGAAGGTGAAGAGTTAGATCAATTTGAGGATGATTTAGAGTTTCTTAGATCATTGGATCCGAAAGATTGGAAGAATCAAGACCATTATGCTGTACTGGGTATTAAAAAAGTTCGTAATGAAGCATCTGAGGACCTTATCAAACGTGCATacaaacacaaaatattgaaacatcatCCGGACAAACGTAAAGCAATGGGCGAAGAGATACGCGCTGACGATGATTATTTCACATGTATAACACGTGCGTGGGAGATGCTAGGAAATTCAGTGAAGAGACGTAGTTATGACAGTATTGATCCTTATTTCAATGATAGTTTACCTGATGACAAAGACGCaaagaatgatttttataacAGTATGGGTAAAGCCTTTGAAGAAAATGCAAGGTGGTCAGTGAAACAGCCTGTGCCTTCATTGGGTGACACCGAAACTCCTAGAGAAAAAGTCGAacgattttattcattttggtATGAATTTGATTCGTGGCGAGAGTATTCTTATTTGGACGAAGAAGACAAAGAGTCGGGTCAAGATCGTGATATGAGAAAGTggattgagaagaaaaataaagcaacACGTGCAAAACGGAAGAAGGAAGAAATGATGAGGATACGTTCATTAGTTGACACTGCTTATAATGCTGATccgcgaataaaaaaatttcagcaGGCtgataaagacaaaaaaactGCCGCAAAACGTGCAAAACAGGAAGCAGCAAAGGCACGCCAACAAGAGGAAGAAAGATTAGCGAGGGAAGTGGCTGATAGAGAACGTTTAGCAAGAGAGAAACGTGAATCTGAAGAGAAAGCTCGACAAGATGCTTTGAAACAGGAACGTGAAACTCTGAAAAAGGCATTGAGGAAGGAGCGTAAAGCACTGAGGGATTTATGTAAATCTAAGGATTATTTTGCTTCAAGTTCTGTCGAAAGTATAAAACACATGGAgagtgttgaaaaaatttgtgaacTATTTAAACTAAATCAACTTGAGGAGGCTATTAAACATTTACAGATCGACGGTAGAGTAGCGTTTCTACGGATTGTTGCTGaagctgaaaataaaattgaggcTGAACGACGTGCGGGTGTTAATCAATCGGAAACACGGAATAATGTATTGGAAAAACAGGTGAAGGCTCACCTCGTTCCGTGGTCCGAATCCGACCTACAATTGTTGATTAAGGCTGTGAATTTGTTCCCAGCTGGAACGAATCAACGATGGGATGTGGTtgcaaattttattaatcaacaCTCAAACAATGGTATTAGTCGTGATGCAAAGGAAGTGTTAGCCAAAGCTAAAGATCTTCAATCAACGGATTTCAGTAAATCCAGCATGAAAGAGCAAGCAAATAAAAAggcatttgataattttattgctgAAAAGAAAACTAAAGAGGCAATTGATGAACGAATGCCGGCTGTTACTGAACGGTTAGATCCACCAGTTACTAATGGCACGGCTGGTGAGATTAAACCTGAACAAAAATCGCAGCCTTGGACGCCAGCTGAACAAAAATTACTCGAGCAAGCGCTAAAAACTTATTCTAATATTGCGGGAACTGAAAGATGGGATCAAATAGCTAGTTGTATTCCAACTAGaacgaaaaaagaatgtaTGAGACGTTACAAAGAACTCGTTGAACTTATCAAGGCTAAGAAAGCAGCACAAATTACGAAACAGTGA
Protein Sequence
MSENYPDNDCIVYNTISPLKKVKIYVAGPSVLHAIAHTKLPTGFERDLLNIQTPESSDGEGEELDQFEDDLEFLRSLDPKDWKNQDHYAVLGIKKVRNEASEDLIKRAYKHKILKHHPDKRKAMGEEIRADDDYFTCITRAWEMLGNSVKRRSYDSIDPYFNDSLPDDKDAKNDFYNSMGKAFEENARWSVKQPVPSLGDTETPREKVERFYSFWYEFDSWREYSYLDEEDKESGQDRDMRKWIEKKNKATRAKRKKEEMMRIRSLVDTAYNADPRIKKFQQADKDKKTAAKRAKQEAAKARQQEEERLAREVADRERLAREKRESEEKARQDALKQERETLKKALRKERKALRDLCKSKDYFASSSVESIKHMESVEKICELFKLNQLEEAIKHLQIDGRVAFLRIVAEAENKIEAERRAGVNQSETRNNVLEKQVKAHLVPWSESDLQLLIKAVNLFPAGTNQRWDVVANFINQHSNNGISRDAKEVLAKAKDLQSTDFSKSSMKEQANKKAFDNFIAEKKTKEAIDERMPAVTERLDPPVTNGTAGEIKPEQKSQPWTPAEQKLLEQALKTYSNIAGTERWDQIASCIPTRTKKECMRRYKELVELIKAKKAAQITKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00996968;
90% Identity
iTF_00996968;
80% Identity
-