Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_958496275.1
Location
OY292410.1:6829610-6831866[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 8.4 7.1e+03 -2.9 0.0 9 20 78 89 76 96 0.76
2 4 6.4 5.4e+03 -2.5 0.0 1 9 258 266 258 267 0.83
3 4 2.7e-08 2.3e-05 24.3 0.0 2 38 296 335 295 337 0.88
4 4 2.9e-11 2.5e-08 33.8 0.2 3 45 377 424 375 425 0.92

Sequence Information

Coding Sequence
atgaggatcatatatatattattcagtgttttacaatttttcaacatatgTAAGCAATCAAGTGCTTGGGACAATGAAGAATTAGAAGTATTTGACGTTGTTGAAGAAgttaatcaaaatttttatgaactTCTCAATGTTCCAAAGGATGCCAATGCCACGAGTATAAGAAAAGCATTTCGACAATTGTCGTTACAATTGCATCCAGATAAAAATGATGCACCCGATGCAGATGAAAAGTTTCGGAATTTGGTGTCTGTTTATGATGTGTTAAAAGATCCGAACAAGAGAAAACATTATGACAATGTTCTTGTCAATGGATTGCCAAATTGGCGATCTGCTGTATATTACTATCGTCATGTACGAAAAATGGGACTATTGGAAATGagcattatattatttatagttatCACAATTGGACAATATCTTGTGGCATGGGCAGCATACTTTGAAAAACGATATACTTATGAACAAGTATTAGGTAGTAAATTACAGaaattacaaaagaaaaatcgtaAAGGTAAAATGGAAGTGCCAGATTTAGCAgatatacttgaaaaaattccatctcCTAGTGTTTTTAACACATTGCCATTTCAATTGCCACGTTGGACTGTCGCGTCAATCGTTGGTATACCATCAACAATATGTGCAATCAAAGAGATGATTGAAGAGAGGAGAAGAcgaaagaaagaggaagaggaagcAGCATTAGCggaagagaatgaagaatcGGAACCAGAGCCAGTACCACGTGGTCCACGTCGACGTAGACCAGTTTTCACACCGCAAGAGCACAGTGGCAATAGCACCAAtgaaacatataataatagaaaagaaaatattcgtccaaataatatttatgagaagCCAAGAATGGTTGGCGGTCTTTGGACGgatgatgatattattgaattgattaaattagTCAAGAAATATCCAGGTGGTACACAAGATCGTTGGGAGAAAATTGCCATTGCAATGAATCGTACGGTGAATGAAGTGACATAtatggcaaaaaaaataaaagatgaggGTTTGAAACCCAAAGTGAATACAGATGATGTTCAAGTTGATGTACAACCAAAGAAAGTTAAGACGCGTGCagttgaaaatgatgaaggTGTTGATTGGAGTCAGGAACAACAAAAGGCACTGGAATCCGCGTTAATTAAATTCCCTAAAAGTGGAAATGTAGATAGATGGGAAAAAATAGCCAATTGTATTGAAGGAAAAACGAAGGAAGAATGTCAATTACGATATCGACAGTTGGttgaaattgttaaaaaaaagcaacaagagcaaaaagaataa
Protein Sequence
MRIIYILFSVLQFFNICKQSSAWDNEELEVFDVVEEVNQNFYELLNVPKDANATSIRKAFRQLSLQLHPDKNDAPDADEKFRNLVSVYDVLKDPNKRKHYDNVLVNGLPNWRSAVYYYRHVRKMGLLEMSIILFIVITIGQYLVAWAAYFEKRYTYEQVLGSKLQKLQKKNRKGKMEVPDLADILEKIPSPSVFNTLPFQLPRWTVASIVGIPSTICAIKEMIEERRRRKKEEEEAALAEENEESEPEPVPRGPRRRRPVFTPQEHSGNSTNETYNNRKENIRPNNIYEKPRMVGGLWTDDDIIELIKLVKKYPGGTQDRWEKIAIAMNRTVNEVTYMAKKIKDEGLKPKVNTDDVQVDVQPKKVKTRAVENDEGVDWSQEQQKALESALIKFPKSGNVDRWEKIANCIEGKTKEECQLRYRQLVEIVKKKQQEQKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00687112;
80% Identity
-