Basic Information

Gene Symbol
snpc-4
Assembly
GCA_958496275.1
Location
OY292409.1:12053297-12055954[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 5.1e-11 4.3e-08 33.0 0.8 1 45 256 302 256 303 0.96
2 4 2.1e-08 1.8e-05 24.7 0.0 3 45 315 361 313 362 0.95
3 4 2.2e-10 1.8e-07 31.0 0.0 1 44 368 412 368 414 0.93
4 4 3.6e-07 0.0003 20.7 0.0 3 34 423 455 422 460 0.91

Sequence Information

Coding Sequence
atgagcGATGAGGAAGATGACATTGATATTCTCGATGATATCAAAGCACTTGAACTTGCATTGGCACAAGAATCAATAGTGCTACCATATGAAAATGATCAGGATCATACTGTTGAAAATGATGCACCGACGTATAACCTTCCAGTTGAAGAAGCATATTTACCTATGTCAAAAGTCGAAACGACATCCGATGGACTTTATGGCACTGTTGAATCGGCTGTTCAAGCCAATGCACGTCTTTTACAAGCATACAAATCAGCTCTTGAAGCTGTAAACAATCGTCTGAATGAATGCATGAGACGACAGCAAGAGGTGCTCTATCAAATACAATTGATTGAACGTGGTGGTAAAGCCAATTGGCGTATTCCATATATCAAAGCTGGATACCCGTATTTCAAAGATGAAAATCTTTTTCGTGCCCCGgctaatgatgatgaattattgaaacaaaaaagggaCGAATTCCCAATTGTTTATTCACGTGCACCATCTAAATGGTCACCAAGAGGACGTACAAATTTGTGGAAAGCCGCACGTGCCAATGCTTCATTAAAATATCTAGAAATGATGAGATCAGTCAATAGGAGTAAAGATGCTGCATCGGATATGGATTATATAGTTCCATCGGATTTTTCATACATACTTGCAACGTTGGGTGATACTGAACTTGATTGGATGAGAATATCAgtaaaagatatgaaaagCCGATACACATGGCAAGCATGCAAAGCAATGTGGAATCTTCATATGAAACCAACTATAAATcgtgaaaaatggaaaaaagatgaagacaaaaaattaacatcATTGGCAGAATCAcatgaatatcaaaattgGGATTTAATTGCAGAGGAATTGGGTACACAAAGAACGAATTATCAATGTTTCGTTAGATACAATACGTTAAATCCACCATCGACATTGTCTGTTAATGTTGATGTTCCATGGGCTGCAATTGAAGATGATCTTGTACTTGAATTAGTTGCAAAATTACGAACTGGCGATATGATACCTTGGACATTGGTGACATATTATTTAGGTACtagaacaaaaaatcaaatttattgtcattggcGATATAATTTAGATCCGGCATTGAAAAAAGGTAGATTTACAACCGAAGAGGATCAAACTCTATTGAGTGCTGCCAATAAATATGGCGCAAATTTTCCGCGAATAGCTGCTGAATTTTTTCCCCACAGATCTACTGTACAATTGAGTAATCGCTTCCGTTTACTAATGTTGAAAACTAATGAATCCTATAATTCATGGACAATAGCAGATGACAAACGATTACTGGCATTGTATGACgaatttggaaataattggagtgttattggaaatattatgaataaagaTAGAACTTATGTTCGACATCATCATGCAGCACTCACGCGTCATTTATCTAAAGGAATTCAACTTCATAATGTACCCCGAAAGCAAAAGTCAACATCCACCAATTACGAGGATGTCACTGATGATGGTGAAATTGATATGAGAGTGAGTGATAATATTGACGTACAGCTGATGCGTTATTTTCACAGTGTACATACACCTGTTGCTGGCCCGGGTAGAAAACGAAAGTATCATACTGCCAAACAATTGGAAGCTAGAACAAAACAACTTCATGACGTATTCAAAAAATTGCatgttaatattgatataccaGATGATCTGGATGATATTCAAGAACTCACAGCAATGGATAAACAATTACTTGTGTCATACAAACAAACTTATGCTACAAATTTACCGAAATATACACCGGATCAAATTGAAGAGTATCGATTAAAAATGTTCCGTAGAAATAAATTGGACGATGATACAGAACATTTTATTCCACCAGCACCATTTggtttatttcaaaatgtacgtaaaaagagaaattcaagaaaaagaaatacagatatcgatgatgatgattgcaATTTAGAATTGGTGATGGAATTTAAAACtccgaaaaatattattgaaatgatgaatgatgatgagataaaaatttttgataaattctcGTCATTTATAACAGAAGTCTGGAAGTTTTCGAAATTTATTGGGCAATTAGAGGAAGAGTATATGAAACCATTGACAACAATTGCTCATGATCCGATCGAAAATTTGCGCTCACAACCAACACCACTATTCTCAACAGATGAAAAACCATCAGACAGAACACATGATACATTTATTGAGCCATGTTACTCAACACTAGTAGGATATCAATGTCTTTTAAATAtgcaaaaattgattcataaaaAACCTATCCCCGATGATTTAACAATGGAAGAACGGGTTGTTGATAAAGAGAGTAAACAAGCGTTTCGATTATTGAAAGATCGTCTTCTTACGTTGTTTAAATATCCAGTTGGTATGGCACGAATACCTGTAGACTATAAGTTAACAAATGATGATGGAAACGATTATGATCATGATGGCGATGAGCAGCATGTAGATAATGCGGGACTAAATGTACCTGAACCAATGCAAAGTTCATGTCAATCACCGACAAACGAATGCGAAGTGGAAAGTGATGAATTCATGTCGGGACACGTCGAAGTATCGACTCCAGTACGATTGAGTTTAAATATGATCAAAACATTACGTGGAAGTAATGAAGACAAAATTGCGAAATTGACTATTTCAAAGAACGAACTTTGA
Protein Sequence
MSDEEDDIDILDDIKALELALAQESIVLPYENDQDHTVENDAPTYNLPVEEAYLPMSKVETTSDGLYGTVESAVQANARLLQAYKSALEAVNNRLNECMRRQQEVLYQIQLIERGGKANWRIPYIKAGYPYFKDENLFRAPANDDELLKQKRDEFPIVYSRAPSKWSPRGRTNLWKAARANASLKYLEMMRSVNRSKDAASDMDYIVPSDFSYILATLGDTELDWMRISVKDMKSRYTWQACKAMWNLHMKPTINREKWKKDEDKKLTSLAESHEYQNWDLIAEELGTQRTNYQCFVRYNTLNPPSTLSVNVDVPWAAIEDDLVLELVAKLRTGDMIPWTLVTYYLGTRTKNQIYCHWRYNLDPALKKGRFTTEEDQTLLSAANKYGANFPRIAAEFFPHRSTVQLSNRFRLLMLKTNESYNSWTIADDKRLLALYDEFGNNWSVIGNIMNKDRTYVRHHHAALTRHLSKGIQLHNVPRKQKSTSTNYEDVTDDGEIDMRVSDNIDVQLMRYFHSVHTPVAGPGRKRKYHTAKQLEARTKQLHDVFKKLHVNIDIPDDLDDIQELTAMDKQLLVSYKQTYATNLPKYTPDQIEEYRLKMFRRNKLDDDTEHFIPPAPFGLFQNVRKKRNSRKRNTDIDDDDCNLELVMEFKTPKNIIEMMNDDEIKIFDKFSSFITEVWKFSKFIGQLEEEYMKPLTTIAHDPIENLRSQPTPLFSTDEKPSDRTHDTFIEPCYSTLVGYQCLLNMQKLIHKKPIPDDLTMEERVVDKESKQAFRLLKDRLLTLFKYPVGMARIPVDYKLTNDDGNDYDHDGDEQHVDNAGLNVPEPMQSSCQSPTNECEVESDEFMSGHVEVSTPVRLSLNMIKTLRGSNEDKIAKLTISKNEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-