Zalb011433.2
Basic Information
- Insect
- Zele albiditarsus
- Gene Symbol
- lola
- Assembly
- GCA_958496275.1
- Location
- OY292414.1:7529291-7533063[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6 8e+03 -3.4 0.1 4 20 102 118 101 119 0.73 2 2 6.4e-09 7.7e-06 25.4 0.1 9 40 405 437 404 442 0.87
Sequence Information
- Coding Sequence
- ATGGAGGACGACCAGCAATTCTGTCTACGATGGAATAATCACCAAACAACACTTATTCAAAATTTCGACACACTCCTGGAGAGCGGTACGCTGGTTGACTGCACCCTGGCAGCGGAGGGAAAGTATCTAAAGGCCCACAAAGTAGTCCTCTCCGCGTGTAGTCCATACTTTGAgGGCCTCCTCAACGAACACTACGACAAACACCCCGTCTTTATATTAAAAGATGTCAAATTCAAAGAATTAAAAGCCATGATGGACTACATGTACAGGGGAGAAGTGAATATCTCCCAAGACCAATTGGCAGCATTATTAAAAGCGGCAGAATCTTTGCAAATTAAAGGTCTGTCGGAAAGTAAAACGGGCGGTAGTACCAGCGGTAATAGTAACAAAACAGAAACAAGGCAGCAAAAGGTTGTCTCACAACCGACGGCAACATCGTTGGACATTCCACACGCGTCTTCCGGTCTCACAATAGAAAAGAACACTAAAGTTCCTAGACAAAGTTTGGCACAAGTATCAGTGAGTGATTTGCCAGAGGATTCGGCCAGTCCTCAATTACCTAAAGGAATCACCTCCAGGGAAGGCTCCCAAAGTCCGACagcaagaaagagaaaaagattcAGAAGAAGAAGTATTGGCGACGACAGCTCTATAGATAACCACGAAGCCTCAAACTCGAGCGATATGCCCCAACAAATAAATGCACCCGCTCTTGGTATTGCACCTGTAGCTGATGAAAAATCTCACATTGACGCAACAGATCCTCTCGGTAGGTCGGCACTTATGCAACAGCTGACCAAACCTGCCGACGATATGTTACAGATGCCAATAGAAAAACCTGAGCCTAATGATACATTGATTGAGCCAAAGTCTGAGTACCTGGAGGATCCTGAGGAGAGCGTCGAGGACTTGACGCTCGACGATGATATGAATGACCTCAATGAAATGGAACAAGATAACAACAGAGCTGGCCCGTCCCACGATCCCTCCCAACACCCTGGTGGGGGGGTTGCGGGAGCGCGGTCTCGTACAAGAGGTTATTCGGTTGATGTTGGTGGAGATGGTGGTACACATTGGACCTCCCATTTCCTCGATTGTAAAAAGGTATCGAACATGAGAAGACCGCGTCCGGACGTTGATGTATCCGCGTTACTCAAGTCACTTGCCAACAAGCAGGGTAGAAAATATAGTTTAGATTCAGTGAAAATGTCATTGGAAGCGATATTGCAGCAGGGGGTTAGCACCACTCAAGCATCTGAGATGTATGGCATTAATCGTTCTACGCTGCAATTTTATCTGAAAAAGTTGAATGTCGTCAGGCGACGATGGAGACAGCCGAGTCTGGCAGCGTGGCACGTATCCGGTGATCGAAGTAACGCGGGCGGCGTTGTTGGTTCGGTCGCGGGTGCCCCGGGAACAACGGACGAGGTCTTCCTAGCCGCCCAGGAGGCCGCGCAGGCCCACCGCGACTCTCAAGGTAGGCTCATCCTTGCCATTTATCAATTGTCCACGGCCCCGTAA
- Protein Sequence
- MEDDQQFCLRWNNHQTTLIQNFDTLLESGTLVDCTLAAEGKYLKAHKVVLSACSPYFEGLLNEHYDKHPVFILKDVKFKELKAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSESKTGGSTSGNSNKTETRQQKVVSQPTATSLDIPHASSGLTIEKNTKVPRQSLAQVSVSDLPEDSASPQLPKGITSREGSQSPTARKRKRFRRRSIGDDSSIDNHEASNSSDMPQQINAPALGIAPVADEKSHIDATDPLGRSALMQQLTKPADDMLQMPIEKPEPNDTLIEPKSEYLEDPEESVEDLTLDDDMNDLNEMEQDNNRAGPSHDPSQHPGGGVAGARSRTRGYSVDVGGDGGTHWTSHFLDCKKVSNMRRPRPDVDVSALLKSLANKQGRKYSLDSVKMSLEAILQQGVSTTQASEMYGINRSTLQFYLKKLNVVRRRWRQPSLAAWHVSGDRSNAGGVVGSVAGAPGTTDEVFLAAQEAAQAHRDSQGRLILAIYQLSTAP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01418424;
- 90% Identity
- iTF_01001479;
- 80% Identity
- iTF_01560544;