Zalb008548.1
Basic Information
- Insect
- Zele albiditarsus
- Gene Symbol
- bab1
- Assembly
- GCA_958496275.1
- Location
- OY292412.1:11433268-11438475[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 5.6 6.8e+03 -3.2 1.7 35 45 192 202 191 202 0.90 2 5 5.8e-08 6.9e-05 22.4 0.0 2 38 206 242 205 248 0.88 3 5 6.2e-13 7.4e-10 38.3 0.0 2 39 256 292 255 299 0.85 4 5 0.15 1.8e+02 1.8 0.0 21 33 326 338 312 343 0.80 5 5 1.2e-13 1.4e-10 40.6 0.1 5 39 371 405 370 409 0.93
Sequence Information
- Coding Sequence
- ATGTCTGAAGATTCAAGTCAACCACGAATAGATGAgagtttttgtttcaaatggaGCGATTATCAAAATCATTTGTCGAGTGTGGTACAGCAACTGCGAGAAGAGGATTGCATGGTGGACGTGACACTTTGTGTTGGTGGCGAACGTATACATGCCCATCGCATAGTTCTATGCGCATGTAGTACATTATTTCAAGAAGTACTCAGTGAGTCCAAAGATGATCATCCTACTGTTATAATTAGCGATATTTCTCCAGCGGATATGAGATCAATTGTAGAATTTTCTTATCATGGAGAAGTTAGAATTCCTGTAGACAATATCAGTGATCTTCTCGATGCTGCTCATTCGCTGAAGATATGTGGGCTGATGGAgATTGAAGGTTTGGATGAAGGTGATTCGCAAGTAAACGCTAAAGATTCCATGGATGATAGTACAAATACGTTTGACGAGACAAATGAAGAAAACAGTGAATTTATCACGGAAGAACATAAAGAGTACCCTATGGTGAGAGGCGCGGACTCTGAAGGTGAAGATGGATCGAATGTACAAAATACaaaagttaataataaaagaaagagaaaacgtAGACGTGAAACAACGAagagagaatataataatgatatgttGGAGGCAGCAATAAATGATGTTCGTGCTGGACAATCACTCGTAGATGCAGCGACCAAGAATAATGTTCCTCGTTCGACACTTTATATGCGTGCTAAGGCTTTAGGTATACAATTGAATGCTGCAAGGAATGAATATCCCCCTGAGTGCATTAAAGCAGCAATCAATGCTGTTATTAATGGTGCGAGCTTTCAGCAAGCATCGGATATGTATAGCATTCCAAAAACAGTATTATGGCGGCGCATACAGAAGGAAGGTTATCATATATTAAGATCCGAAATGAAAAGATCATATGATGCTGGAAAGAGAGAAGCAGCTGTTAAAGCTCTAGAAAGAGGAGAAAATCTCACCAAAGTGGCATTAGAGTTCAAGATACCTAAGACAACGTTATTCAGggacaaaacaaaattagttGATCAAGGAAAATTACCTGAATCGTTTTGGCGAAAACGTAAGACCGAAGacgaagaaatgaagaaactTCGTTTAGAAGAAGCTGTAGCAGCATGTATAGAAGGCAAAATGTCACAAGCTGCTGCTGCAGTGGCTTTTCATATACCGAAAACAACGATATGGCGTCGGCTGCAGAAAGAAAATCGCAAAGCAGATCGTGGTGATATTGGTAAAAGGGAAACGGAGAAAATTGAATCACCCGTCAGCACCAAATTAAAATGTGAATCGAATACGGAATTTTCGTTATGCGAGGTTTCCTCGGACATTCCGATAACTTACATTGATGAAAATAGTTTACCAGATGATTCTGTAATAATTTTGACTACAAGCGATGTTGATGGACTTGGTATGGATGAGAATCGTGAAATAATAGTTAATACGGATTCTGGCCATGAATATGTTCCATGTTCACTGAACATAGAAGAGACTGCAAATTATACATCAGCCGAGAGTTAA
- Protein Sequence
- MSEDSSQPRIDESFCFKWSDYQNHLSSVVQQLREEDCMVDVTLCVGGERIHAHRIVLCACSTLFQEVLSESKDDHPTVIISDISPADMRSIVEFSYHGEVRIPVDNISDLLDAAHSLKICGLMEIEGLDEGDSQVNAKDSMDDSTNTFDETNEENSEFITEEHKEYPMVRGADSEGEDGSNVQNTKVNNKRKRKRRRETTKREYNNDMLEAAINDVRAGQSLVDAATKNNVPRSTLYMRAKALGIQLNAARNEYPPECIKAAINAVINGASFQQASDMYSIPKTVLWRRIQKEGYHILRSEMKRSYDAGKREAAVKALERGENLTKVALEFKIPKTTLFRDKTKLVDQGKLPESFWRKRKTEDEEMKKLRLEEAVAACIEGKMSQAAAAVAFHIPKTTIWRRLQKENRKADRGDIGKRETEKIESPVSTKLKCESNTEFSLCEVSSDIPITYIDENSLPDDSVIILTTSDVDGLGMDENREIIVNTDSGHEYVPCSLNIEETANYTSAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01001509;
- 90% Identity
- iTF_01560570;
- 80% Identity
- iTF_01560570;