Zvit002553.1
Basic Information
- Insect
- Zaprionus vittiger
- Gene Symbol
- hang
- Assembly
- GCA_018904025.1
- Location
- JAEIFQ010001126.1:647978-655444[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.15 13 6.3 1.0 3 23 133 154 132 154 0.93 2 14 0.11 9.5 6.8 3.5 3 22 261 280 259 280 0.89 3 14 0.00033 0.028 14.7 3.3 1 22 377 398 377 400 0.90 4 14 0.038 3.2 8.2 0.1 2 21 412 431 411 432 0.93 5 14 0.00043 0.036 14.4 0.2 2 23 496 518 495 518 0.95 6 14 0.0011 0.093 13.1 0.1 1 23 526 549 526 549 0.96 7 14 0.00016 0.013 15.7 2.9 2 23 633 655 632 655 0.97 8 14 0.012 1 9.8 0.2 2 23 664 686 663 686 0.95 9 14 0.0092 0.78 10.2 0.1 1 22 699 720 699 720 0.95 10 14 6.9e-05 0.0058 16.9 1.1 1 23 732 754 732 754 0.99 11 14 0.0011 0.09 13.1 0.9 1 23 762 785 762 785 0.96 12 14 3.9e-05 0.0033 17.7 0.4 3 23 851 871 850 871 0.98 13 14 0.0028 0.23 11.8 0.1 1 23 906 928 906 928 0.97 14 14 0.0036 0.3 11.5 0.3 3 23 1111 1131 1111 1131 0.98
Sequence Information
- Coding Sequence
- ATGACTAGCAACGTCGGGGCCACCGCCTGTGCTGCCGCTGGCACTGCCTCATCCTCTGCTTCTGGGTCTGCGTCTGCATCTGCTTGTGCCGCCTCTGTCTCTGCTGCAGTCACGACTCCGTTGCTCATGCCGCCGCTGCCCGCCGTGCCCATCAAGGATGAGCCCTTGGACGACACAGACGATGACTTTCAAATGAAGTGCATTGACGAGTCCGATGACATGATGGATCCCACAATGTTCCTAGAGCGCTCCGAGCATGAGGGCGATGTGCCAATAATGACCTCCGAATATGATTATGCGACGCAGCATGGCGTAACGGCAGTTGCGGCAGCAGCAACGCTACCCCCCACCGCTGTCGCAAATGTGGCAGCCGCTGGTGATTCCAAGGTGGCCAGCTGCCGTGCCTGCAGTCTGCAGTTCTCGACGCGGGCGAATGCGCGACGCCACGAACGCAATCTGCATCCGAATCTATTTCAACTGTCGACAGATTCGCCAAACAACACGCCGATAACAAAGCCAACGCCAGCCCTGGCTGCCGCACTGGAGATACAGCGTGCTGCCGCGGCGGCGGCCGCCACAGCGGAGGCAACCAAAGCCGCAGCCGGTGGAAATATATCGACACAAAAGTATCGCCAGGTGGTCATGAATACGTTCATCAAGTGCGAGAACGGAGGCTACGACTACGACAACCCGGAGCAGTATCAGCAGCTGTTGACGCGCGACAAGGTCGAGTTCATACAGGACAACGGCGAGTTCCTCGAACAATACCAGACAATGACCTGCCGCTGCTGCAACAAGTTCTTCAGCACGTACAAGAACTTCATGGCGCATGTGAGGAAGAAGTATCCGCTGCTGCCGCGCAATCTATGCTTTAATTGCCTCAAGATGAACGACTCCAAGGCGTTGTTCATCTCTCATCTGAAGAAGCGCAACTGCATCAACTTGTACCGTGTACTAAATGCTCTGCGTGCCAAACAGCCCAGTTTTGCTCATGCCACGGCAGCAGGAGGAGGAGGAGGAGGAGGAGGGTCAGCAGATCAGCAACATCTGCAGCTAACGTCGGCACATGATACCTCTGCGGATCGGCCAGAGAAGCTGCGCGCCAAGGAGCTGCTGGTGAACAAGCTGTACGAGTGCAAGCTCTGCCCCAAGGGCTTCCGCACCAAGCACGAGTTCCGCACCCATGTCTACGACAAGCATGCGGATGTGCAGCGCAAGGACAACAACTCGATACAGTGCAGTTTCTGTGGCCTGGACTTTGCCGATCCGGTCGATCGGCGACGACATTATAACAATATGGACTGCATTGTCCGGCTGCGCTGCATGACCTGCGATGCCAAGTTGGAGACGCATCAGCGTTTCCTCGATCATGTCTATCAGGATCACTTGGGTGGCGTCAGCAGCGACAACGCGTCGACGGGCAACAGTGGCTTGGATCATTCGCCCGGCAAACGGAGTCTGCTGGGTGCTCTGGGCATTGGGATCATGTGTCCGATCTGTGGACAGCAGTACAACAACTACAACAATGTGCTGCGCCACATGGAGTCAAAGCATCCCAATAAGTTGCCCGAGACATACAAGTGCGTGCGTTGTGGACTGGGCTATCCGCGCATCTCGTACCTGCGCGAGCACATGATCAATGTGCATGGCGTGGACAAGAATCGGCATTCGGGCGGCTTCGAGTACATTGTGAATGCGGATGCAGTCAAGCTGGCGGATGGCAGCACACCCAATGTCTATACGGGACGCTATGACTATGTCATGAAGGATCTGATGTCCATAACAAATGGTGGGACACTCGACGATGACGACGAGGAGACCGGCAGCATAGCCAAGAAGATGCCTGTCTTTCGGCGTAGCTTGGATCAGGCTGCCGATCGTCGCTTCCGACGCATGCGTTGCCGCATCTGTCAGCGTCGGTTCAGCTCGAAGAAGTCCTATCGCTACCACATGCTCACCGACCATCAGGTGCAGAACGTGCAGTTCATCAAGTGCAAGCTCTGCAATGCGGAGTTTGCGTACGAGAAGGGACTGAAGGTGCATCTGTTCAAGGTGCACGGGCGGGCGATTAAGGACGAGATGATTGTGAAGCAGTTCGAGTGTGATGTCTGCTCCATTGTCTACAGCTCGGAGCTGGAGCTGCAGCAGCACAAGCGCAGGCCGGGAGTGGGGGCCAGTCTGCCGCTGTACTGGTACCAGTGCAAGTATTGTCCATCTAACTTCAATACCAACAAGAAGCTGGCGATCCACATCAATTCGCACGATGAGTTCGACTCGAACGACTATTCGTGCAAGGATTGCGGCAATGTCTACAGCGGTCGCAAGAGTCTATGGGTGCATCGCTATAAGAAGCATCCGCAGGTGCCTGATCCCGCCGAGTGCACGCTGTGCCGAGTAGCTGTTGCTGGCGAGGGCGTCGATAGCAGCAATGGTGGTGGCAACAACACTGTTCTTGCTGTTGGCAAGGCTGGCAAGACTGGGGGCACAAACAGTCACAGCCACAGCAGCAGCAGCACAGGCACACTGAAGATACGCATACCCGAGGTGGCATGCACCATTTGTGGGGCACGCTTCACGGACCAGGAGATGTTTAGCAAGCACATACAGCGACACGAACAGGAACTCTATGTGGATAACCCGTTGGCAGCGATGTTCGACGATGGTCCCGCCGATGCTGGACAGTTTCAGGTGGAGCGACAGAACGAGAATGGGGAATACGCGTGCGATTTGTGCGCCAAGACGTTCCCGCAGGTGATCGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAATCCCATCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCGTCGCCACATGTATGAGCTGCACAAGCACGAGGTGAGCACGCTGCCAGAGCCGCCAGTGATTGAGGTGGATGATCCTCTGAGCTGTCGCCGTTGCGGTCAGCTGCAGTTCGAGACGAAGGAGGCATGGATCGAGCATAAGCTGGCCGATGCCAAGGTCGTCCGTCCATTCTGTCCATTCCAATGGGGCTGTGATCTGTGCGGCGAGTATTTGTCGCGCAAGGAGAAGCTCATCAATCACATTAACAATCATCTCAAGGAGGAGGTGATTGTACCCGTAGCGTCCAAGACGGAGGATAAGAAGCTGTCAAAGGCAGCTGAAGGTGGAGGAGGAGATGCTGACGAAGGTGACAGCGAGTTGGACGATGATACGGACAGCGATGGCGATGATGATGGGGAGAGCACAAGCGCCGAGGATGAAGATGGTGATGAAGAGGATGGTGAGGGTGACGACGATGAGGATGATGACGATCAGCAGGATGATGAGGATGCAGCTGCAGCTGCTCGTGCTGTGCAGCATCACAATAACAAGAACATTAATAGCACTATTAATGACGATGATGATGATGATCTCATCGAGGAGTTGATCGAAGAGGAACTCGACGAGGATGACGATGAGGATGATGATGATGTGGATGATGAGGACGATGACGATGACGACGAGGGCGAAGATATTGATGAGGATGTTGCGCAGCCACATAACAACAACAAGCAACAGCAACAACAACAAGCGACACGCCTCAAATGGCTTAATGGCAATGGGGGCAGTGGCAAACAGACGGCAACGCAAAGTCGCCGAGTTGCAGAGTCCAAAGCGAAGCCACAATCACGAGCACAACCACAAGCAGAAGCAGAAGCAGAAGCAGTGCTGGTCATGCACAGCTCTGAGGATGATGAAGATGAAGACGACGACGATGTGGGGGATGCTGAGGAGGAGGAGGAGGACGAGGGTGCTGTAGGTGTGCAAGTGAACAATCGTGCTGCTCTCAGCAAGGGCGACAATGTTGGTGTTGCTGGTGGCCGCCGTGCAGACGGTGGTGCTGGTGGTGACGACGATGGTGGTGTTGATACATCATCGTCGGAGAGCGAGTCGACAACAACAACATCGCATTCAACTGGAGCTTCTGCAGACACACATTAA
- Protein Sequence
- MTSNVGATACAAAGTASSSASGSASASACAASVSAAVTTPLLMPPLPAVPIKDEPLDDTDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPIMTSEYDYATQHGVTAVAAAATLPPTAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISTQKYRQVVMNTFIKCENGGYDYDNPEQYQQLLTRDKVEFIQDNGEFLEQYQTMTCRCCNKFFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRAKQPSFAHATAAGGGGGGGGSADQQHLQLTSAHDTSADRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNASTGNSGLDHSPGKRSLLGALGIGIMCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEETGSIAKKMPVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDVCSIVYSSELELQQHKRRPGVGASLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECTLCRVAVAGEGVDSSNGGGNNTVLAVGKAGKTGGTNSHSHSSSSTGTLKIRIPEVACTICGARFTDQEMFSKHIQRHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRHMYELHKHEVSTLPEPPVIEVDDPLSCRRCGQLQFETKEAWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEEVIVPVASKTEDKKLSKAAEGGGGDADEGDSELDDDTDSDGDDDGESTSAEDEDGDEEDGEGDDDEDDDDQQDDEDAAAAARAVQHHNNKNINSTINDDDDDDLIEELIEEELDEDDDEDDDDVDDEDDDDDDEGEDIDEDVAQPHNNNKQQQQQQATRLKWLNGNGGSGKQTATQSRRVAESKAKPQSRAQPQAEAEAEAVLVMHSSEDDEDEDDDDVGDAEEEEEDEGAVGVQVNNRAALSKGDNVGVAGGRRADGGAGGDDDGGVDTSSSESESTTTTSHSTGASADTH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -