Basic Information

Insect: Zaprionus vittiger
Gene Symbol: -
Assembly: GCA_018904025.1
Location: JAEIFQ010001099.1:15423249-15425178[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.5e-05 0.0013 18.9 0.2 1 23 262 285 262 285 0.97

2 8 4.1e-07 3.5e-05 23.9 1.0 2 23 297 318 296 318 0.96

3 8 0.00017 0.014 15.6 0.5 1 23 327 350 327 350 0.94

4 8 0.0091 0.76 10.2 0.1 3 23 360 380 358 380 0.96

5 8 0.00024 0.02 15.2 6.5 1 23 386 408 386 408 0.98

6 8 6.4e-05 0.0054 17.0 0.1 1 23 413 435 413 435 0.98

7 8 1.4e-06 0.00012 22.2 1.7 1 23 441 463 441 463 0.97

8 8 0.11 8.9 6.9 3.8 1 23 469 492 469 492 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.5e-05	0.0013	18.9	0.2	1	23	262	285	262	285	0.97
2	8	4.1e-07	3.5e-05	23.9	1.0	2	23	297	318	296	318	0.96
3	8	0.00017	0.014	15.6	0.5	1	23	327	350	327	350	0.94
4	8	0.0091	0.76	10.2	0.1	3	23	360	380	358	380	0.96
5	8	0.00024	0.02	15.2	6.5	1	23	386	408	386	408	0.98
6	8	6.4e-05	0.0054	17.0	0.1	1	23	413	435	413	435	0.98
7	8	1.4e-06	0.00012	22.2	1.7	1	23	441	463	441	463	0.97
8	8	0.11	8.9	6.9	3.8	1	23	469	492	469	492	0.96

Sequence Information

Coding Sequence: ATGGCAGCGGTGACTGAAACGGAAAACGATGAAATTGAGATTCCGAGAGTGAGCTCTAGCTTAAGTAATTGGCGTCTTTGGTGTCGCCTTTGTGCCAAAGATGACCTACAGGGCAATATAAATGTATTCCTCAAGAACGAACATACTACGTCAGCAGAACGTGAGGGGGATGCCAATGGGGGCGCAGTCAATGACCTCGCCTTGGCCACAGCCATAGGAAAATATTTCTGGGTTAATATAACGCGCGGCGAGGAGCTGCCAGAGATGATATGCAGTGAGTGCCTCACGCTGGTCACATCACTGGTGAATTTCTCGGAGCGCATCACACGCGTGCAAAAGCTTTACTGCATCTTGCAGAGCTCGCCCAAGGAGTCCATCAATCTGCAGGAGTTGCGCGCTAAATTTGGTCTGCAGGAGGATGAGGAGGCGGAAACAGAGCCAGAGCCGGAGACGCTAACCGAAGTGCATTATGTAGAGGAGAAGCCCAAGCTCAATGAACTTGAAGAGGAGGAAACGACGTTGGAGTTGGAAAATCCGCTCACGCCGTGTCTGAAGAACGAGGAGTCGATCAAAGCAGATGACAAATTACAGGAGGATGAGGAGCAGGAAAAGGATACTGCGCAGCACGAGGAAGACGAGGAGCCAGAGGAGGCGCATCAGGAATTCGAAGATGCAGGCACCGAGCTGCTGGTCAACCTGTGCGACGCCTATAGTAATGCCCCCAGCAGTGAAACCAGTCCCAAGTCAAGCAGGCACAAAGATTCTGCGTCGCGTGGCAAGGAGTATCAGTGCAGCGAATGCCCGCGAGCTTATGCCTTGGAACAAACGCTGCAGCGGCACATGCGGCAGGAGCACGGCAAAGTCAAGGTCAGGCAGTCAAAGCTGCTGCCCTGCGAGCAGTGCGAGAAGATGTTCCGCTCGAGCTACCAACTACAGCGACACATGCAGCAGCATCTGCCCATGCCCAATCGAAAGCTGTATCCCTGCACCAGCTGCGGCAAGAAGTTCACCACCTCCGCCTCAGCACAGTCACATGCACAGTACATGCATCAGGAGGAGCGACCGCGTCCAGTGATCTGTGAGCAATGCGGCGTTGCTGTGCATTCGCTGAGCGCGCTCAAGGAGCACCTGCTCAGCCACACAGACTACGCACCGTACGAGTGCGACGTGTGCAAAAAGTGTTTCAAGAGTGTTAGTCGACTGAAGCATCACAAGGAGACTCACGATCCGCACAAGTACATCTGTCCCGAGTGTGGCATGCAGCTGAACTCGCGTGCCACACTCAACCGGCATCGTCTGGTGCACACAGATCAAATGCAGCACAAGTGCGACTATTGCGGAAGGGAATTTAAGCGTGCTAAGGCGCTCAAGAATCATCTCATCCTGCACACCGGACTCAAGCCGTACTCCTGTGACTTCTGTGAACGCACCTTTGCCAATGGTGCCAACTGTCGCACGCACAAGAAGAAGTCGCATCCAGAGGAGCTGGCAGCTCAGGAGGCAGCCGGCGGTGGCAAGAGCTACAATCGTAATATACCCAAACTGGAGGCTTTGAAGGCATTTACCAAGAACAAGGACAATCTGTCACCGGTGGCCACCAAGCAGAGCGGTTGCTTTGCCTTTGGCAGGAAGCCCAAGGCGACGCAACAGCAGAAAATCTTAGCAAGCGCTGCGCCAGAAGAGGAGCCTGCCACCATAGACAGCATCTACAATCACATCATGAAGCAGACACCCGATGAGTCGGCTCGGTCCACCACGGATGCAGCTCCTCCTGTTACAACACAGTCGCCGGAGGAGGCGACACAACTCTTTAGCTATTAG
Protein Sequence: MAAVTETENDEIEIPRVSSSLSNWRLWCRLCAKDDLQGNINVFLKNEHTTSAEREGDANGGAVNDLALATAIGKYFWVNITRGEELPEMICSECLTLVTSLVNFSERITRVQKLYCILQSSPKESINLQELRAKFGLQEDEEAETEPEPETLTEVHYVEEKPKLNELEEEETTLELENPLTPCLKNEESIKADDKLQEDEEQEKDTAQHEEDEEPEEAHQEFEDAGTELLVNLCDAYSNAPSSETSPKSSRHKDSASRGKEYQCSECPRAYALEQTLQRHMRQEHGKVKVRQSKLLPCEQCEKMFRSSYQLQRHMQQHLPMPNRKLYPCTSCGKKFTTSASAQSHAQYMHQEERPRPVICEQCGVAVHSLSALKEHLLSHTDYAPYECDVCKKCFKSVSRLKHHKETHDPHKYICPECGMQLNSRATLNRHRLVHTDQMQHKCDYCGREFKRAKALKNHLILHTGLKPYSCDFCERTFANGANCRTHKKKSHPEELAAQEAAGGGKSYNRNIPKLEALKAFTKNKDNLSPVATKQSGCFAFGRKPKATQQQKILASAAPEEEPATIDSIYNHIMKQTPDESARSTTDAAPPVTTQSPEEATQLFSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01554133;
90% Identity: iTF_01557065;
80% Identity: -