Zvit012774.1
Basic Information
- Insect
- Zaprionus vittiger
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018904025.1
- Location
- JAEIFQ010000874.1:2619367-2632929[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.12 2.8e+02 1.2 0.0 16 35 352 371 348 379 0.85 2 2 4.3e-19 9.9e-16 57.0 0.0 1 43 571 614 571 616 0.95
Sequence Information
- Coding Sequence
- ATGCATGAAGAAATCCAATACAAATGCCTAGAACGTGTCGCTGAGGAATTAATGGGTCGCAGGAAATGGAAACATTATCAAGATCAAGTGACGCGCAATCAATTGAATATTGCCGAGCAACAGCCCATATCGATAACGCAAGAGACCGAAGAGGACAGTCAGAAGAGCGAAAACTGCAAACCAACACTGAACAACCGTTTAGAGCAGCCCAGCGGCATCAGCAACAGCAACAACAACCAGGGCCTACTGCAATTTGAAAGAGAACTTGACAAGCAGCAAACATCACACGAACACGACTCAAGTGCAACATCACGTAGCTCAGGCTCACCTTCACCACCACCGCCAGAACCCAACGATTGGATACCGTCTGATAAGTGCAATTTCTGTATTAACGGTCGCCTGCTAACGGTAAACGCCCAAGGCGAATTGGTAGCCGAACCAACTACAGCAACAACAACTCACAACTGCAGCACCAGCACCAGCAATATTTACAGCGGCATAGCTTTGCAGCAGCACGACAGCGACAGCAACTCGAGCGCATCGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTGCCGCTGCCGCTGCCACTAGCAGTCCCACACTCAAAGATACTCCCAGTCCCAGTGCAGATGCGCCCCTGGATCTGAGCAGCAAACCATCGCCTAATTCATCCATAAGCGGCGACAGCAAGACAGTCAGACACTCGGACTGTGGTGCATCCATGCCAGCGTCAGCCACGCGCTGCATCAGCGAGCCACTGTCCAAGCACAAGCTTGGCGGGCGACGAGCATCCGGTTATTACCAAGGACCGCGGTCGACGATGCTGCGCAACAAACTGTGCAAGTTGTCGTCGTCCGAACTGAAGCGAGAGCCACAGCATGAGTTGCAGCACGAGCACGACGGCGCCAGCCCCGGGCTGGGAGCAGAAGAGCAAGATGAGTCTGGTGACGAGGTCGGAGATGGCGATAGCAATGCATCGACGCCGGCATCGACAGGCTTTCAGGAGATCGCCCAACACATTGCGGCTAGGGAACATCTGCGCAAGCTAAGCGGCATGTCCGAGCACAATGGCAGCGAGCTGGGTGACGATATGGAGTCGGGTCAAATGTCGCCCAAGCTGATGCGGCCACAGAGCACAGGCACACCCACGTCGGGCGCTGCTGGGCTGCAGGGAGCGACAACGGCAGCGATGGCAGCCAGCGCCGCAGGGTTGCCCATGCACATCGATACGAATGTGTTGCTGCAAACGTTGCTGCTGGCGACGGGCATCGTTATGCCCAATCCGGATGATACACAGCGACTGGGAGACCTGATCAAGACACTGATACTGGCGAATAGTGGAGGCATTCTGAACGAGAGACTTGATGCTGCCGCCCTGGCCGCTGGCAAGGGAACGCGACCAAAGCGCGGCAAGTACCGCAACTACGATAGGGACAGTCTGGTCGAGGCGGTCAAGGCGGTGCAGCGTGGCGAGATGTCGGTGCATCGTGCGGGCAGCTACTACGGCGTGCCGCACTCTACACTGGAGTACAAAGTGAAGGAGCGTCATCTGATGAGGCCGCGCAAGCGTGAGCCAAAACCTCAACCGGATCTCCCCAGCATGTTCTGGGCGCAGCCCAATGCGGGCGCCAGCTATGCCCTGGACTTCAATCGGAATCCCGAATTTCTAAAGTCGCACCTTGCCGAGGTGATGCGCAGCAGTCCGCTGGCCAATCATCATGCCGTTCATGCAGGCTCTGCCGCAGCGGGGGGCATGAAGAGTGCGCTGGAGTTCACCGAGAATATGTACGATGGCATTATCCGCAAGACGCTCAATAATGATGGCGACATGGGGGGAGCGACCAGCGGCACGGGCAACGGCAATGCGCTGCTGGATCAGCTGCTGGTGAAGAAGACGCCTCTGCCGTTTACCAATAATCGCAGCAACGATTATCTGGCTGCCACCTGCTCCTCCAGAGAGGGCGCTGAGGGTGTCAAGCGGCCGGGCAGTCCTCTGGGTGGGGGCGGCGGAGGAGGCGCCTATGCGGACATCAAGCGCGAACGACTCAAGCTGCACCACGAACCTGCAGCAGGGACGGCGACGTCGACAGCGATATCGCCCGGCAGTTCCATACTGCACGAGAAGCTGGCACAGATCAAGGCCGAGCAGAGCGACTATGCTGCCAGCGATGAGCAGTTATAG
- Protein Sequence
- MHEEIQYKCLERVAEELMGRRKWKHYQDQVTRNQLNIAEQQPISITQETEEDSQKSENCKPTLNNRLEQPSGISNSNNNQGLLQFERELDKQQTSHEHDSSATSRSSGSPSPPPPEPNDWIPSDKCNFCINGRLLTVNAQGELVAEPTTATTTHNCSTSTSNIYSGIALQQHDSDSNSSASLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAAATSSPTLKDTPSPSADAPLDLSSKPSPNSSISGDSKTVRHSDCGASMPASATRCISEPLSKHKLGGRRASGYYQGPRSTMLRNKLCKLSSSELKREPQHELQHEHDGASPGLGAEEQDESGDEVGDGDSNASTPASTGFQEIAQHIAAREHLRKLSGMSEHNGSELGDDMESGQMSPKLMRPQSTGTPTSGAAGLQGATTAAMAASAAGLPMHIDTNVLLQTLLLATGIVMPNPDDTQRLGDLIKTLILANSGGILNERLDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLPSMFWAQPNAGASYALDFNRNPEFLKSHLAEVMRSSPLANHHAVHAGSAAAGGMKSALEFTENMYDGIIRKTLNNDGDMGGATSGTGNGNALLDQLLVKKTPLPFTNNRSNDYLAATCSSREGAEGVKRPGSPLGGGGGGGAYADIKRERLKLHHEPAAGTATSTAISPGSSILHEKLAQIKAEQSDYAASDEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -