Zvit006511.1
Basic Information
- Insect
- Zaprionus vittiger
- Gene Symbol
- kn
- Assembly
- GCA_018904025.1
- Location
- JAEIFQ010000333.1:1370234-1389540[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.099 8e+02 -2.2 0.2 440 468 34 62 7 72 0.60 2 2 1.2e-89 9.7e-86 288.2 0.1 42 185 98 241 67 244 0.95
Sequence Information
- Coding Sequence
- ATGTTCGCGCCGAGAAGAAGTGCGCGTGTGGCCGATATCGAAACTGCGTCTCTCAGTGCCTCCTTGGTGAAGATGACAGCGGGCTTTCATTCCGTGCATTCAGCGACGGCAAATCAGCAGCCAACGCACTCCCATTCGCATTCGCATTCGCAATCCCAATACTCGAGTACCCACACTCACAATCAAACGAGCAACAGACTCGAGCATCATCAGCATCTGCTGCACGAGGACACTCTGCAACAGGATCACAATCCCAATCAGACACTGAACAACAAGATAATGCGCTGCGACGTGAGCCTGGGCATCGGCCGCGCCCACTTCGAGAAGCAGCCGCCCAGCAATTTGCGCAAGTCCAACTTCTTTCACTTTGTGATTGCGCTCTACGATCGCGCAGGCCAGCCCATTGAGATCGAGCGTACCGCCTTCATTGGCTTCATCGAGAAGGACTCGGAATCGGATTCAACAAAGACCAACAATGGCATCCAGTATCGCCTGCAGTTGCTCTATGCCAACGGTGCCCGACAGGAGCAGGACATATTCGTGAGACTCATTGATTCGGTTACTAAAGCGGCCATCATCTACGAGGGGCAGGACAAGAACCCCGAGATGTGCCGTGTCCTGTTGACGCACGAAGTGATGTGCAGCCGTTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACGCCGTCGGACCCCGTCATTATTGATCGAGGCGCGTTGAGGGACGAGGAGACTAAGTTCGTGTCGAGCTCGGAGTCGGAGTCGGAGTAG
- Protein Sequence
- MFAPRRSARVADIETASLSASLVKMTAGFHSVHSATANQQPTHSHSHSHSQSQYSSTHTHNQTSNRLEHHQHLLHEDTLQQDHNPNQTLNNKIMRCDVSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDSTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKAAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRGALRDEETKFVSSSESESE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00562257;
- 90% Identity
- iTF_01551507;
- 80% Identity
- -