Zvit006301.1
Basic Information
- Insect
- Zaprionus vittiger
- Gene Symbol
- retn
- Assembly
- GCA_018904025.1
- Location
- JAEIFQ010000344.1:17671744-17682774[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-26 3.8e-23 81.5 0.0 2 89 20 105 19 105 0.96 2 2 5.3 1.2e+04 -3.4 0.0 28 44 213 229 204 238 0.70
Sequence Information
- Coding Sequence
- ATGCTCATCTCCGAGGATCAAATACAGGAGCTCTACGAAATCAACGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGCGCGGCACGCCCATCAATCGGCTGCCGATAATGGCCAAATCGGTGCTGGATCTATATGAGCTATATAATCTGGTTATAGCGCGCGGCGGCCTTGTCGATGTGATCAACAAGAAGCTATGGCAGGAGATCATCAAGGGGCTGCATCTGCCGTCGAGCATCACCAGCGCTGCATTCACGCTACGCACCCAATACATGAAGTACTTGTATCCATACGAATGCGAGAAGAAGAACCTCAGCACACCTGCGGAGCTGCAGGCAGCGATCGATGGCAATCGCCGCGAAGGACGTCGCTCTAGCTATGGACAGTACGAGGCTATGCACAATCAAATGCCATTGACACCGATTTCACGCCCCTCGCTACCCGGTGGCATGCAACAAATGTCGCCGTTGGCGCTGGTCACACACGCCGCTGCAGCCAACAATCAACAGGCACAGGCAGCAGCAGCGGCGGCAGCAGCGCATCGTCGTCTGATGGGCGGCCCTGCCTTCGGGCAGATGCCGAATCTGGTGACACAAGAGATCGAGAATCGCATGATGGATGCGCAGGTGGCGCTGTGGCAAATGTACCACAACAGCAGCCCAACCGGTTCGGCACACACCTCACCACAGCAACGCGAAGCTTTGAACCTATCCGATTCACCGCCCAATCTCAACTTGAGTCACATCAAGCGAGAACGTGATCGTGATCCCACGCCTGAGCCAGCGGATCACGAGGAGGCACCACCACCAGCAAAGCGTGTGGGCAGTGGTCTGATGCCACCAGAGGATGAGTATGGCCCAGGGGAGCACAACATCACAGGCAATTCCTCCTCGCTGCACGATGACAGCGAACCACAGCAGCTGAACGGACATCATCACCATCTACATCATCATCTGGAGCGTGATGATCATGAGCTGCATCATCATCATCATCATCAGAATCATTTGGACAAGTCAGATGATTCTGCCATTGAGAACTCACCCAGCACATCCAACACAACCGCCGCATCTGCTTCAGGTGGCGGCAATCGACACAGTTCGCCTGTGTCCACCAAGAAGAAGAGCAACTGTAGCAGCAAAACACAGTCCAGCTCCAAGCAGGAGCAGCAGCAGCAGGCACAGCAGGAGGTAGGGGGTGCTTCAGTCAAGCTAAATCCGCTAGAGACTCTCAGTCTGCTCTCTGGCATGCAATTCCAAGTGGCACGCAATGGCACTGGTGCAAATGGTGAACAACAGTTGATTGTCAATCTGGAGCTGAATGGCATCAAGTATACTGGAGTGCTGGTGGCCAATGCAGCAGGAGCAGCACGTGGTGGTGTTGCCAACAACGATGAGGAGGAGGAGGAGGAGCAGCACGAGGAGGCAACAGCAGCTGAAAAGTGTGAGGAGGTGCTGTCTTCACCACGCGCAGATGTGGTGAAGTTGGAGAAGCGTCAGGAAATGAACCAACAGGAGGCACACGATGAACAGGTGGAGACGCCACCATCGCCTCCACTGACCGATAACAATGGTGCGGGGGAAAATGAGACGGCAGCGACTGTGGGTGCACTAGGTATGGGGGGCGTGGTGGGCGGAGTAGGCGTTAATATGCTAAAAGATGCTGTGGTCAGTTCGTAA
- Protein Sequence
- MLISEDQIQELYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMDAQVALWQMYHNSSPTGSAHTSPQQREALNLSDSPPNLNLSHIKRERDRDPTPEPADHEEAPPPAKRVGSGLMPPEDEYGPGEHNITGNSSSLHDDSEPQQLNGHHHHLHHHLERDDHELHHHHHHQNHLDKSDDSAIENSPSTSNTTAASASGGGNRHSSPVSTKKKSNCSSKTQSSSKQEQQQQAQQEVGGASVKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYTGVLVANAAGAARGGVANNDEEEEEEQHEEATAAEKCEEVLSSPRADVVKLEKRQEMNQQEAHDEQVETPPSPPLTDNNGAGENETAATVGALGMGGVVGGVGVNMLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01555218;
- 90% Identity
- iTF_01558059;
- 80% Identity
- -