Basic Information

Insect: Zaprionus tsacasi
Gene Symbol: -
Assembly: GCA_018904105.1
Location: JAEIFR010000507.1:4055258-4059259[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00039 0.027 14.8 0.1 1 23 157 180 157 180 0.96

2 14 0.0016 0.11 12.8 3.1 2 23 229 251 225 251 0.90

3 14 0.012 0.81 10.1 0.9 1 23 360 383 360 383 0.93

4 14 0.57 40 4.8 4.9 2 23 432 453 431 454 0.95

5 14 0.0094 0.65 10.4 1.0 1 23 523 546 523 546 0.88

6 14 1.9 1.3e+02 3.2 0.1 2 14 565 577 564 589 0.85

7 14 0.0035 0.24 11.8 5.5 2 23 597 619 597 619 0.96

8 14 0.00086 0.059 13.7 0.1 1 23 728 751 728 751 0.95

9 14 7.5e-05 0.0052 17.0 0.2 1 23 813 836 813 836 0.93

10 14 0.0008 0.055 13.8 3.2 2 23 886 908 885 908 0.97

11 14 0.0041 0.28 11.6 2.1 1 23 1002 1025 1002 1025 0.91

12 14 0.049 3.4 8.2 1.5 1 21 1077 1097 1077 1098 0.95

13 14 0.36 25 5.5 0.1 2 14 1146 1158 1145 1170 0.78

14 14 0.55 38 4.9 1.2 1 23 1188 1212 1188 1212 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00039	0.027	14.8	0.1	1	23	157	180	157	180	0.96
2	14	0.0016	0.11	12.8	3.1	2	23	229	251	225	251	0.90
3	14	0.012	0.81	10.1	0.9	1	23	360	383	360	383	0.93
4	14	0.57	40	4.8	4.9	2	23	432	453	431	454	0.95
5	14	0.0094	0.65	10.4	1.0	1	23	523	546	523	546	0.88
6	14	1.9	1.3e+02	3.2	0.1	2	14	565	577	564	589	0.85
7	14	0.0035	0.24	11.8	5.5	2	23	597	619	597	619	0.96
8	14	0.00086	0.059	13.7	0.1	1	23	728	751	728	751	0.95
9	14	7.5e-05	0.0052	17.0	0.2	1	23	813	836	813	836	0.93
10	14	0.0008	0.055	13.8	3.2	2	23	886	908	885	908	0.97
11	14	0.0041	0.28	11.6	2.1	1	23	1002	1025	1002	1025	0.91
12	14	0.049	3.4	8.2	1.5	1	21	1077	1097	1077	1098	0.95
13	14	0.36	25	5.5	0.1	2	14	1146	1158	1145	1170	0.78
14	14	0.55	38	4.9	1.2	1	23	1188	1212	1188	1212	0.86

Sequence Information

Coding Sequence: ATGGAAGGTATGGATCTGTGGACGTCTATGTTTTCGGCTGATTTTGAGGAGGAGGAATATGGTGAGGGGGAAAGTCACAACAACGAGTTTATGGCCGAAGAAGAGGAGGAGGAACATGAGGCTGATATAGACGAGTGCGATGAGAGAAACAATATGAAGGACAAAGGACACGAGCCCGATGATGATGCCATATTTGATTTTGAAATAAAGCCAAATGTAAGTATTGCTGAATCGGAACCGGATTCTGAGTCAGAGACCTCACGAAGACCAAATGCAGTGCCATTAGCTCCACAAATGCCATCTGCGCCACCAGTACGGCCCATGCGACGTCAGTCTCAGCCAAGCGCATTTGGCTCTCCGTTGATAGTCCGAACCGGACCAGGAGCTGCATCAACACGCCCGACAACATCACAAATTAATGCAACCGACGAAAATGGTGTTCCAATTAATTACGAACTGGGTGTTGTGTACATATGTCCCGCCTGTGGAGCAGAATACCGCCAGCAGGATATGTGGAAGCGTCATATGAATCAAATGCATCAATATAATACGCGGAAGGGGCTTAACTTTGTGGCGATGGATAAACTGTACCATCGGTGTCTGGAATGCAATAAACGGATCGCTATGCACAGCCGTGAGAATCTGTTGAAACATAAGTTTACACACTTGCCATTTCGGTGCACCAAGTGTTATATCTGTAAGCGAGAGTACAAATACAGGCAGGATCTGATGGTGCATTTGCGTATGGTGCACTGCGACGAAGTGGTAGCAATGATGCGCGAGGGCGATACCAGTGCCGGCCGCAAGACGCGTAATCGCGAACCACGCCATGAACAGTATATTAGCCCATATTCTATACCAGTTGAAGGTCATGATGGTGATGATGCTCTTGATACCAGTAATGAGCTAATCGAGCCGAACTCTTTGGCTAGAGATGAGGCGAGCATCAGTTTGGATGACGAACCTGGTCGAAATCCATTAGGCAAGAGAAAGCAGCTTAGTAATCCAGTTGCAGGGAGCAGTAATAACAATGGAAATAACAATGGAGCTGCTGAAATATGCGAAGATTATATACACTACATGTGTCCGGATTGTGGTACCGACTGTGACACTCATGCCCAGTGGAGTCAGCACATTGAATTCGTGCACGACTATGTCAGTAGGCGTGGTCTGAATTTTCGCAGTGTGGATATGCAGATGCAGTGTCTAGAGTGCAAACAGATTGTTATTCCCAATACAATGAAGACATTGCGCGCTCATAAGTTCAATCACTTACCTCAGCCGGAGTGGATGCGCTGCAAGTTGTGCTACAAAGGCTATACGGAACACCATGAACTAGTTGGGCATCTGTTAAAGCATCATCATCTGAACACTTTATTGCCTGATGCCGAAGAGGCTGAGGAATCGACTCACAACCGAGTCATTGCCAGTGCGGTGGATGATGATGAGGAAGAAAATGCTATGGATGACAATGGCTGCGATGAGGAATCCTTTCCACATTGCGAAGATCCCCCACGGCGTGGTGGTCGCATTAGCGCCGATGATATGTACGAACCTCACATTGACTATCTTTGTCCACAGTGCGGAAGAGAATTTTTCGAAAAGAAACATTGGCGTACTCACGTTGTGCAAGTGCACGGAATGAATGATCTGAGCAAGCTGAACTTTGAAGTGCTCAGTGAATGGCAGCTAAAATGCACTGAATGCGATAAGATTATTACGAATGCATATGGAATACAGAATGCTCAACAGCATAGGATTACGCATCTACCATATAAGGCGTATGCACGTTGCTGCAAATGCCATAAATCGTATACAGATCGCAAGGGTTTGGTCAAGCATTTGGCCACATATCATCGTGTGGGTTATGAACCTCGTAAGTCAAGTGGAGGTACAGGAACAGGAGGGCCAGTGAGTGGCCAAGGAGGAACGACAACTGGTCAACAACAACCGAAGACGCAGCAACCACGTAAACAGATTGTAACTGTAGCAAATGAAACATATGAGATTATTTATTTGGATGAGGAGGATCAATCTTCTTCACCTGGCAATAACAACAACATTAATGAGGAGAATGATTTTGGCGAGCAAATGCAAGCGGATGACGATGATTATGCCATAGGTTCCAGTGCCACCAATCGTCAATTGAACGTTTCAGCTGCCAATCCCAATCCGAATCGTTATAAATGTGTCGATTGCGGTAGCTTGTTTCCCACACAGGCTGCCCTTAAGACACACATTAGTGAGGAGCATGATTTTATAGATACAAAATACAGTGCCAAAAAGTTTGATAATGCTGAGCCGACTGACGAGGCTGCTGGCGCTTCGTCATCAGTTTCAGGTACAGCAACGGCTTCAGCTAAGGCAGCAACTACCGGTAAAAAATCCCAACAAATAAATACAGCTGGCCTGTCGACTGTTGAGCAGAATTATATCTTCCTGTGCCCGTCGTGCGGCAAGGCCTATAAGACACAGTTCGAGTGGCGTCGTCATATTAACGAGGCACACAATTTTGATAAACGACAGTATTTAAACATGCGTCAGCTGGATAAATATCGTTACCAGTGTACTCAGTGCAAAGATATTGTATGCAATTCGAAGCTGAAGGGACTGCAGGATCATCATTTTCGGCATCTACCCTATCGATTGTACTTAAAGTGTCTGGTCTGTGGTACCTGCTATAATCACAAGCCCAACATAACTGCGCATCTACGCACACGTCATAATATCTTTGAGCGTGAGCTGCCGTGCCGGGAACAGCAGTCGAAGACACAGTATAATTTTGTTATGATGAAAGACAAGGAGGACAAGGAAATGCACAGAAAGTCATCCACATCAAAGTCACCAACACCTGCTACCACCAGCAGCAGCAGCAGCAGCGTTGTCATCGCGGGTCGTTCGCTAAAACCCCAACCTGGTTTATTAGCCACACGACCAGCTGGTCTAAATACGCTGGAAGACAGTATATCTTATCACAATGCTGTAGATCTGGATTTTATTACCTACTTTTGTCCCAAATGCAACAAGAACTTTGATTCGCATGCCTTTTGGCGCAAACACATCGTGGAGCAGCACAATTACAATAGTCGTCAAGGCTTAAATTTTCGCCAGATTGATAACCATCACTATTTGTGCCTGGAGTGCTATAAGCGAGTAACTGTTACCCATACAAAGGGCGCCATTGGTCAGTTGCAATCGCACAAGTTCCGACATTTACCATATCGCTCCTTCAAATGCTTGACATGCAATGGTGAATTTGTTCGCAAACAAATGTTCTTCAAGCATTTGAATCGTGATACGAATCGATGTGACAACAAACCGCTCAGTGGTCAAGAGAATGAAGATGATTGTGCAGATCCGGCCGAACTTTTGCATAGCGTTGAAGAGAGTACAGTATCAATTGCTGAGGACGTGGATCCAGCGGCATATTCCTTGATATGTCCGCAGTGTGGCGAGAATTTCAATAGCAGTAAGAAAGGGTTATGGCGAGAGCATATTAACATTAAACATGGACTGGGCAAGCGTGAGATGCTTCATCTGCAAAAGCTGGGGGAAGAACAATATCGTTGCACGGACTGTGATGAACAGCTGGAGACAAAGCAACTGCGATTACTGCAGCAACATCGCTTCAAGCACTTACCATATGCCGCCTATATACGTTGTCAGCTGTGCGAACAGCAGACAGATGGAGTAGGACATGGAGCCGCTGCAGCTGGTCTGCATAGTATGCGTGAGCTTCAGCAGCATATACGGGACGTTCATCCTGCCGCCGCTGAGAATGATGAACAGATACAGTCGCTGCTAGAGGAGGATGAGGACAGCCATCCAGTTAACAAGGAGGAAACAAATGGACCTTATATGCCCCTGCCGCCACATTTACTGGACGACGTTGTAGATAATAACATGGAATTTGAAGATCCGTATATGCTGGGCTAA
Protein Sequence: MEGMDLWTSMFSADFEEEEYGEGESHNNEFMAEEEEEEHEADIDECDERNNMKDKGHEPDDDAIFDFEIKPNVSIAESEPDSESETSRRPNAVPLAPQMPSAPPVRPMRRQSQPSAFGSPLIVRTGPGAASTRPTTSQINATDENGVPINYELGVVYICPACGAEYRQQDMWKRHMNQMHQYNTRKGLNFVAMDKLYHRCLECNKRIAMHSRENLLKHKFTHLPFRCTKCYICKREYKYRQDLMVHLRMVHCDEVVAMMREGDTSAGRKTRNREPRHEQYISPYSIPVEGHDGDDALDTSNELIEPNSLARDEASISLDDEPGRNPLGKRKQLSNPVAGSSNNNGNNNGAAEICEDYIHYMCPDCGTDCDTHAQWSQHIEFVHDYVSRRGLNFRSVDMQMQCLECKQIVIPNTMKTLRAHKFNHLPQPEWMRCKLCYKGYTEHHELVGHLLKHHHLNTLLPDAEEAEESTHNRVIASAVDDDEEENAMDDNGCDEESFPHCEDPPRRGGRISADDMYEPHIDYLCPQCGREFFEKKHWRTHVVQVHGMNDLSKLNFEVLSEWQLKCTECDKIITNAYGIQNAQQHRITHLPYKAYARCCKCHKSYTDRKGLVKHLATYHRVGYEPRKSSGGTGTGGPVSGQGGTTTGQQQPKTQQPRKQIVTVANETYEIIYLDEEDQSSSPGNNNNINEENDFGEQMQADDDDYAIGSSATNRQLNVSAANPNPNRYKCVDCGSLFPTQAALKTHISEEHDFIDTKYSAKKFDNAEPTDEAAGASSSVSGTATASAKAATTGKKSQQINTAGLSTVEQNYIFLCPSCGKAYKTQFEWRRHINEAHNFDKRQYLNMRQLDKYRYQCTQCKDIVCNSKLKGLQDHHFRHLPYRLYLKCLVCGTCYNHKPNITAHLRTRHNIFERELPCREQQSKTQYNFVMMKDKEDKEMHRKSSTSKSPTPATTSSSSSSVVIAGRSLKPQPGLLATRPAGLNTLEDSISYHNAVDLDFITYFCPKCNKNFDSHAFWRKHIVEQHNYNSRQGLNFRQIDNHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPYRSFKCLTCNGEFVRKQMFFKHLNRDTNRCDNKPLSGQENEDDCADPAELLHSVEESTVSIAEDVDPAAYSLICPQCGENFNSSKKGLWREHINIKHGLGKREMLHLQKLGEEQYRCTDCDEQLETKQLRLLQQHRFKHLPYAAYIRCQLCEQQTDGVGHGAAAAGLHSMRELQQHIRDVHPAAAENDEQIQSLLEEDEDSHPVNKEETNGPYMPLPPHLLDDVVDNNMEFEDPYMLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01551267;
90% Identity: iTF_01554972;
80% Identity: -