Ztsa006347.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Zaprionus tsacasi
Gene Symbol
RREB1
Assembly
GCA_018904105.1
Location
JAEIFR010000001.1:9364649-9370289[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.025 1.7 9.1 0.8 1 21 3 23 3 25 0.93
2 11 0.0087 0.6 10.5 0.2 1 19 35 53 35 53 0.98
3 11 0.25 17 5.9 1.8 2 20 135 153 135 155 0.93
4 11 0.006 0.42 11.0 0.1 1 23 329 351 329 351 0.97
5 11 8.4e-06 0.00058 20.0 0.7 1 23 361 383 361 383 0.99
6 11 0.00057 0.039 14.3 2.0 1 23 389 412 389 412 0.97
7 11 5.9e-05 0.0041 17.4 0.3 2 23 1060 1081 1059 1081 0.97
8 11 0.099 6.9 7.2 6.3 1 23 1087 1110 1087 1110 0.97
9 11 5.9 4.1e+02 1.6 4.3 1 23 1237 1260 1237 1260 0.87
10 11 0.0058 0.4 11.1 0.5 3 23 1314 1334 1312 1334 0.96
11 11 0.00095 0.066 13.6 4.8 1 23 1340 1362 1340 1362 0.99

Sequence Information

Coding Sequence
ATGAAATATCTCTGCCCCATCTGTGAGGTCGTTTCGGCCACGCCCCACGAGTTCACCAATCACATAAGGTGCCACAATTATGCCAATGGCGATACCGAGAACTTCACCTGCCGCATCTGCTCGAAGGTTCTCTCATCTGCCTCCTCGCTGGACAGGCACGATGATGATGAGCACATCACCAGCACACCAGATGTGGCAACCCTGCTGGCAAGTGGCAACACCACACCCTCCCAGCATGCACGTTCCCCCTCGCCCATGCATTCCCTGTGCTCCTCGCCCACCCCGCCGCCGCCCAGCTGCCTGAGCTGTCCCGCCTGCCCGCCGGGAGGAGGAGGGCAACCCTTCGAGACGCTGCACGCGCTGTGGCAACACTTGGATGCGGAGCATGCGGATATACCGGCCAAGTGTCGCGATTGCGAGGTGATCTTCGCCAGCCATCGCCAGTTGCAGGTGCACAGCTGTCGCCGGCGTCTGCCCCCGCTGCTGGGCAACAGTTCCTCGCCCAAGCGGAGGCAGGAGGAGGAGGAGGAGCAGGTGGAGCAGGCCTACGAGCGTGCCTTGCTGCTCAAATCGGAGAGGGAGGAGGAGGATGAGGATATGGATGGCGGTGAGCAGCAGCAGGCGGATGACTTCATCCAGCAACTGTATCTGGGTAAGGCAGCCGCTGCAGCAGCTGCTGCCGCTGCACATGCCGCTGCGGCAGCACACGCCGCCGCTGCCTCCCAAGTGGCCAACTCCGCCAGCTCCTCATCCCAGTTGCCTTCGCCCATCAAGCATGAACTCATGGAGGCGCGTGCAGGGGCCGCACAAGATTTCGCCGATATACAGAGCATACTCAACATGACCAGCTCCAGTTGCACCTCCAGTTTTCTGCGCAATTTCGAGCAATCCGTGAACACGCCGTGCTCCAGTCGCGATGGCGACGGGGAGGAGGCACAGGATGCCTTCACCAGCGAGTTCCGGCGGATGAAGCTGCGCGGCGAGTTCCCCTGCAAGCTCTGCTCGGCGGTGTTTCCCAATCTGCGTGCCCTCAAGGGACACAATCGTGTCCACTTGGCTGCAGTGGGTGCAGCGGGTCCCTTCCGCTGCAACATGTGCCCGTACGCGGTCTGCGACAAGGCGGCGCTGGTGCGGCACATGCGCACCCACAACGGGGATCGTCCCTACGAGTGTGCCGTCTGCAACTACGCCTTCACCACCAAGGCCAACTGTGAGCGTCATCTGCGCAATCGGCATGGCAAGACCAGCCGGGAGGAGGTGAAGCGCGCGATTATCTATCATCCCGCGGAGGATGCCAGCAGCCAGGAGCAGGAGCAGCTGAAGGCAGAGCATGAGCTTAGCTATCGCTCGCTCACACCGCCTCCCACAGTGTGCCCAGAGTCGTCCACGTCGCAGTTGAAGCACATGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCCAGCTGCACAGCCACCGCTGAAGATACAAGTCAAGAGTTTAGATCAGTTGGTGGAGAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGCTGGGTGTGCCCGTTCCAGCTGCCACTGGACCCGTCAAGATGGTCATCAAGAACGGCGTCCTGATGCCCAAGCAGAAGCAGCGTCGCTATCGCACCGAGCGACCCTTCGCCTGCGAGCATTGCTCGGCAAGATTCACGCTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCGCCCATTTCGGAGCAGGTGAAGTACGCGATCTTGGCGCAGCAGCTGAAGGCACGCAAGGATACGGATCTGCTGCAGCAGGCGCTCTCGCACGGCTCCAGCAGCATAGCAGGGCATCCGCTGCTGCACTATGGCAACTACAGCAAGGGGCAGGCTGGGGGCAACCATGTGACCACCGCCAGCAATGGTCACCATGCGCAGCTCGATGATGATGAGCCGCCCAAGCTGATTATCGATGAGGATGAGGAGGAGGATGAGTTTGATGAGCTCGATGCAGACTTGGAGGAGGAGCAGGAGCAGGACGAGGATGAAGATGAGGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCACGCCCATTAAGCTGGCCAAGCAGGTGGCCGATAACATACTGGAGCAGGCCATCAAGGCGGGCGGAGAATCCTCTCCAGCCACTGCCACTGCCACGCCTGCCACTGCCATGAAATCGATGATAGCACAAGCCGATGCCGTTGCCAAATCCCTGAAGGATGTGGCCAGTTCCCCCTTCAAGGATGACTCACAGGATCTGGTGCCAGTGGCCAAGCTGGTGGACAATGCGACCAGCAACCAGACCATGTCCTCGTTCAACAATTACTTTCGTCCCAGCGATGTGGTGAATCACATGGAGCAGAGCGACGAGGAGGGCCTGGTGGCCTCCGGCAGTGCCAGCGAGAGCAACAACAGCGGCACCGAAGATGTGGCCGCCTCGGTCAGTGGTGGCAATGGCGCCTCCTCCAGTGACACCAAGAAGAAGTCCGCCTACAGTCTGGCTCCGAATCGTGTCAGTTGTCCCTACTGCCAGCGCATGTTCCCCTGGAGCAGCTCGCTGCGGCGTCACATCCTCACGCACACGGGCCAGAAACCCTTCAAGTGCTCCCACTGCCCGCTGCTCTTCACCACCAAGAGCAACTGTGATCGTCATCTGCTGCGCAAGCACGGCAACGTGGAGTCCGCCATGTCGGTGTATGTGCCGGCGGAGGATGTACGTGAACCCATACCGGTGCCCAAGTCCGTGGAGGAGATCGAGCTGGAGGAGCAGCGACGTCGTCGTGCGGCGGCGGAGGAGGAACGTGAACGTGAACTGGAGCGTGAGCGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGCGCCTCCTCACCCGCTCCCGCCGATGCCCAGCTGGGCTCCGATCTGCCCTACAAGTGTCATCTCTGTGAGTTCTCGTTTGGCGAGCGTATGCAGTGCCTGGAGCACATCAAGCAGCAGCATGCACAGGAGTTTGCCCTGCTGCTGGCCAAGGGAGCCATAGAAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACTCGGATGAGGAGGGTGCTCCTAGGGGGGGCAAATATCCCGACTACAGCAATCGCAAAGTGATCTGCGCCTTCTGTGTGCGTCGCTTCTGGTCTACCGAGGATCTGCGGCGTCATATGCGCACCCACTCCGGCGAGCGACCCTTCCAGTGCGACATCTGCCTGCGCAAGTTCACGCTGAAGCACAGCATGCTGCGGCACATGAAGAAGCACAGCAGTGGGCGTGGCAGCGGGGGCAGTCACAATGGCGATGCCGGTTGCCAGTCCGATTGCTCCGATGATGAGCACATGGGTGCAACGCCACCAACAACCCCCACGCCCATGGTGCTGCCCGTGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCATACTCAACAAGCTGCTCTCCTCGGCGGATGAGGCAGCCAAGCTGCTGGGCGTGGACAAGTAA
Protein Sequence
MKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHDDDEHITSTPDVATLLASGNTTPSQHARSPSPMHSLCSSPTPPPPSCLSCPACPPGGGGQPFETLHALWQHLDAEHADIPAKCRDCEVIFASHRQLQVHSCRRRLPPLLGNSSSPKRRQEEEEEQVEQAYERALLLKSEREEEDEDMDGGEQQQADDFIQQLYLGKAAAAAAAAAAHAAAAAHAAAASQVANSASSSSQLPSPIKHELMEARAGAAQDFADIQSILNMTSSSCTSSFLRNFEQSVNTPCSSRDGDGEEAQDAFTSEFRRMKLRGEFPCKLCSAVFPNLRALKGHNRVHLAAVGAAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKRAIIYHPAEDASSQEQEQLKAEHELSYRSLTPPPTVCPESSTSQLKHMLXXXXXXXXXXXXXXXXXXXXXXPPAAQPPLKIQVKSLDQLVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLGVPVPAATGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPISEQVKYAILAQQLKARKDTDLLQQALSHGSSSIAGHPLLHYGNYSKGQAGGNHVTTASNGHHAQLDDDEPPKLIIDEDEEEDEFDELDADLEEEQEQDEDEDEDXXXXXXXXXXXXXXXXXXXXXXXXXSTPIKLAKQVADNILEQAIKAGGESSPATATATPATAMKSMIAQADAVAKSLKDVASSPFKDDSQDLVPVAKLVDNATSNQTMSSFNNYFRPSDVVNHMEQSDEEGLVASGSASESNNSGTEDVAASVSGGNGASSSDTKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPAEDVREPIPVPKSVEEIELEEQRRRRAAAEEERERELERERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASSPAPADAQLGSDLPYKCHLCEFSFGERMQCLEHIKQQHAQEFALLLAKGAIETXXXXXXXXXXXXXXXXHSDEEGAPRGGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSSGRGSGGSHNGDAGCQSDCSDDEHMGATPPTTPTPMVLPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGILNKLLSSADEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01554947;
90% Identity
-
80% Identity
-