Basic Information

Insect: Zaprionus tsacasi
Gene Symbol: -
Assembly: GCA_018904105.1
Location: JAEIFR010000598.1:5216861-5220480[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.2 81 3.8 5.9 2 23 341 363 340 363 0.96

2 18 1.8 1.2e+02 3.3 0.0 1 23 370 395 370 395 0.93

3 18 0.11 7.8 7.0 4.2 3 23 407 427 406 427 0.93

4 18 5.1 3.5e+02 1.8 3.0 2 17 438 453 437 464 0.75

5 18 0.023 1.6 9.2 0.3 3 23 497 517 495 517 0.95

6 18 0.00063 0.044 14.1 0.3 1 23 525 548 525 548 0.98

7 18 0.00035 0.024 14.9 0.3 2 23 553 574 552 574 0.97

8 18 1.1 75 3.9 0.8 1 20 582 601 582 603 0.84

9 18 0.00016 0.011 16.0 0.4 1 22 622 643 622 646 0.90

10 18 0.05 3.4 8.1 0.8 3 21 653 671 653 672 0.90

11 18 0.014 0.94 9.9 0.7 1 23 691 716 691 716 0.96

12 18 0.0072 0.5 10.8 1.4 2 23 732 754 731 754 0.94

13 18 0.0055 0.38 11.2 0.4 2 23 760 782 759 782 0.92

14 18 0.043 3 8.3 0.2 2 23 786 808 785 808 0.95

15 18 8.4e-06 0.00058 20.0 2.5 1 23 814 836 814 836 0.99

16 18 0.036 2.5 8.6 0.9 1 23 840 863 840 863 0.93

17 18 5.7e-06 0.0004 20.5 0.9 1 23 869 892 869 892 0.97

18 18 0.0031 0.22 11.9 0.4 1 23 896 924 896 924 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.2	81	3.8	5.9	2	23	341	363	340	363	0.96
2	18	1.8	1.2e+02	3.3	0.0	1	23	370	395	370	395	0.93
3	18	0.11	7.8	7.0	4.2	3	23	407	427	406	427	0.93
4	18	5.1	3.5e+02	1.8	3.0	2	17	438	453	437	464	0.75
5	18	0.023	1.6	9.2	0.3	3	23	497	517	495	517	0.95
6	18	0.00063	0.044	14.1	0.3	1	23	525	548	525	548	0.98
7	18	0.00035	0.024	14.9	0.3	2	23	553	574	552	574	0.97
8	18	1.1	75	3.9	0.8	1	20	582	601	582	603	0.84
9	18	0.00016	0.011	16.0	0.4	1	22	622	643	622	646	0.90
10	18	0.05	3.4	8.1	0.8	3	21	653	671	653	672	0.90
11	18	0.014	0.94	9.9	0.7	1	23	691	716	691	716	0.96
12	18	0.0072	0.5	10.8	1.4	2	23	732	754	731	754	0.94
13	18	0.0055	0.38	11.2	0.4	2	23	760	782	759	782	0.92
14	18	0.043	3	8.3	0.2	2	23	786	808	785	808	0.95
15	18	8.4e-06	0.00058	20.0	2.5	1	23	814	836	814	836	0.99
16	18	0.036	2.5	8.6	0.9	1	23	840	863	840	863	0.93
17	18	5.7e-06	0.0004	20.5	0.9	1	23	869	892	869	892	0.97
18	18	0.0031	0.22	11.9	0.4	1	23	896	924	896	924	0.89

Sequence Information

Coding Sequence: ATGTCGGAAAATTCGAAAATAAATAGCGAAACCGGGCCTAGCTGCCTGCATTGCAGAGTGATCAATTCAAAACAGCCATATCAGGAGATATTCGATGATGTGGGCATAGAAATCGAGTTGGCCGATCTGTTGGCTAAGTATTTTCAGATAATTGTAAAACCAGATGCCCAAAAATCGCAATTGCTGTGTCAGGAGTGCGTAAAGACGCTAATACGCCTGTTTGACATTGACGAACTGCAGAGAGAGCAGGATGCTGCAACCAAAAAAAGAACACAAATTGTGCCAGATCCTGCGCCTGTGGCTACGCCAGTTGCCAGAAAGGAAACAAAATCAGCTGGCAAAAAGCAGACGCCACCGGCATCAAAAGCAATTGGTGAATCAGTCGCATCGAAAAAATTGGCGCCCGCATCCGAATTATCGTCTGCTAAGTCCAGTCCAGGTGCAGCAACTCCTACGCCAGCGATTTCCATACGCATAACCAGAGCAAAAACTCAAGCTACGACGCCAAAGCGTGCGCAGACTACACCCAAAACAAAAACACAAAGCGTAACGTCGCCGGGAAAAGGTAGAAAACCCAAAGAAGGCGACCAGGAGCAGATTAGTGCATTAATACGTGACATACTCGATGACGCGGAGTCGCCGCACGATGATAAATTCGCTGAAGCTGCTGCCACAGTACGACAATTGGAGAAGCAGGCCGGCGAGGAGCAGCAGCATCAGCAGGCGCTGGAGGAACTGGTCGAGGAGCAGGAGCAGGAGCCCGAAAATGGGGATGAGTTGGAGTTTTTGGTGCAAGATGATTCGTCTGGATCGGACGAGCGGCAGTTTAAAGTGATAAAGAAGGCATACCCGGATGATTCCCAGTCAGCAAATGAGACGCAGAGCGAGGATGAATCCTTAAAAGTGGAACCATTCAATTTCGTGTTGATCAAGGAATCGGATGGCATTGATGATTTGCTAGAATACCTGGGAACTGTGGTTAAGACCTGCTTCGAGACTCTCACCTTCGATTGGGCCACAGTGTGCCGGCACTGCTCGTTGAAGTGTAACAAATTCGAGAGTCTGCTGAACCACATGCTCAAGCGTCATAAGTTGGCGGAGGAGCGCTTTAAGTGTCCCATAGACGGGTGCACAGCGGAACTAAAAGGTCGCAAATACCTGGCCATGCACTTGGTTGTGCTGCATGCACCAGTGGCAGACATTCCCATCTATGGCTGTTGTCCTGAGTGCAACATGACCTTTTCCAATATACTACAGTACAACAAACATTCCTGCGCCCATGTGATCAAGAAACGTCGTGGCATACGATTGTACTGTGAGATGTGCGGATTGGAATTCCCATCTTGGAAGCGTTTCAATTTCCACAATCAATTCCATCTGGAGCGACACAGGCCACGCGCCTGTTTTGTATGCAACTATGCAAACAACAACATCGATGATCTCTTCCAGCATTTGCACTACTCGCACGAACCCGAGGGCACGCTCTTTTGTGATCTCTGTGATCGTAACTTCCGTGATGCTGCTGTTTTCATGGAGCACAACAAGTCGCACGCCAATGTCAGCAGCACCACCTACAGCTGCAGCGAGTGCAGTGCCAACTTCGAGACACGCGGACGCCTTAATGGGCATATGCGCTCCATACATGGCACCATCATTAGCTGTGAGCTCTGCAGTCGCGAGTTCGCCACCGAGGCCACCTTCAACATCCACATGAAGAAGCATTTGATTATCGAACGTGAGGTGCACGTTTGCCATCATTGCGGCATGCTCAGTGAGAATCATGATAAGATGGTGGCACATGTGGAGAATGAGGATTCAGCCTGTTTTGGCGTTGATATCTATGCCGAACTGCTGCGTGATGCATACATCTGTGAATACTGCTCGGCATACTTCAAGCAGAAGTCCGATTTGCGTGCTCATCGTGATTCTGGCGTGCACAAGAATGGCATGTTCTGGTGTCAGCCATGTGGAAAGGAGTTTACGGACATGAAGCTCTATCGTCATCATCTGCGCAACTATCAGCTACAACGCGCTGATGTGGAGCATCGTAAACTAGAGATTTGTCTATACTTTATGTGCGATTTTGAGGATTGTCTTGAGTCGTACATCAATTGGAATTCACTGTACACGCACAAGCGGCGCACGCACGATACAGTCGAGAAAATGGAAGCGAAGACGAAAGAGGGTGAATGGGTGTGTCAATTCTGCCAGAAAGTGTGCCGCTCCAAGATGTCGCTGTCGGTGCATGTGGCAAGAAGTCACAACAACAACAATGTGGTTTGTTCGCTTTGCAAGGCTTCGTATAAGGATGAGGAGGCGCTGAAGAAGCATCATGCCTACTGGCATGAGCCAATGGAGTGTGCGTTGTGTCTGAAGATCGTGAAGAATCGACGTAACTTTGATACGCACATGAATGTAGTACACTCAAACAACAAGCGCTACAAGTGCTCCGTTTGCCAGAAGGGATTCTATCACAAGAGCGAAATGGAGGCGCATCAGCGGTTGCATAACCAACTCTACAGTTGCGAGCAGTGCAGCTTCCAGACCCGCAACAAGAAGTCCTTGTCCGTGCATGTGCTTGGCCAGCATTACAAGCGATTTGCCTTCGAGTGTAAGGTTTGCGACAAACGCTTTGGACGTCGACAAGGATTGTCTAATCACATGCAGCGTGTCCATGGCTCAAAGTACACGTGCCGCGACTTCTTCGATGGTGGCTGCAGCAAATCCTTTGGATCAACTACACAACTTAATGTACACGTGCGTAAGGTGCATAATGGCAGCATTTTATTCGATGATGACAATGACAAAGCTGATGAGGATCTAGAGGAACAACAAGATGAAGAGGAGGAGGAAGAGTTGGAAGGAGACGTAGAAGCGGAACAGATACAGAAGAAGGTACAGAATGCAGCAGGTCCGTCCACATCGAAAAAACGTTGCATTCGCATCAACGACGACACTCAAATTGAGTTCATTGGCGGCGAAGATGTCGATGATGAAGTGGAAATGCTTGAGGAGATTCAAGAGTTGAAGAACGAACGTAAAGCGCCCCCAAGGAAGAAGCTTAAACGAACTTAA
Protein Sequence: MSENSKINSETGPSCLHCRVINSKQPYQEIFDDVGIEIELADLLAKYFQIIVKPDAQKSQLLCQECVKTLIRLFDIDELQREQDAATKKRTQIVPDPAPVATPVARKETKSAGKKQTPPASKAIGESVASKKLAPASELSSAKSSPGAATPTPAISIRITRAKTQATTPKRAQTTPKTKTQSVTSPGKGRKPKEGDQEQISALIRDILDDAESPHDDKFAEAAATVRQLEKQAGEEQQHQQALEELVEEQEQEPENGDELEFLVQDDSSGSDERQFKVIKKAYPDDSQSANETQSEDESLKVEPFNFVLIKESDGIDDLLEYLGTVVKTCFETLTFDWATVCRHCSLKCNKFESLLNHMLKRHKLAEERFKCPIDGCTAELKGRKYLAMHLVVLHAPVADIPIYGCCPECNMTFSNILQYNKHSCAHVIKKRRGIRLYCEMCGLEFPSWKRFNFHNQFHLERHRPRACFVCNYANNNIDDLFQHLHYSHEPEGTLFCDLCDRNFRDAAVFMEHNKSHANVSSTTYSCSECSANFETRGRLNGHMRSIHGTIISCELCSREFATEATFNIHMKKHLIIEREVHVCHHCGMLSENHDKMVAHVENEDSACFGVDIYAELLRDAYICEYCSAYFKQKSDLRAHRDSGVHKNGMFWCQPCGKEFTDMKLYRHHLRNYQLQRADVEHRKLEICLYFMCDFEDCLESYINWNSLYTHKRRTHDTVEKMEAKTKEGEWVCQFCQKVCRSKMSLSVHVARSHNNNNVVCSLCKASYKDEEALKKHHAYWHEPMECALCLKIVKNRRNFDTHMNVVHSNNKRYKCSVCQKGFYHKSEMEAHQRLHNQLYSCEQCSFQTRNKKSLSVHVLGQHYKRFAFECKVCDKRFGRRQGLSNHMQRVHGSKYTCRDFFDGGCSKSFGSTTQLNVHVRKVHNGSILFDDDNDKADEDLEEQQDEEEEEELEGDVEAEQIQKKVQNAAGPSTSKKRCIRINDDTQIEFIGGEDVDDEVEMLEEIQELKNERKAPPRKKLKRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01559910;
90% Identity: iTF_01554897;
80% Identity: -