Basic Information

Insect: Zaprionus tsacasi
Gene Symbol: -
Assembly: GCA_018904105.1
Location: JAEIFR010000574.1:3814079-3815988[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.1e-07 1.4e-05 25.1 1.2 1 23 63 85 63 85 0.99

2 16 0.0011 0.073 13.4 3.2 1 23 91 113 91 113 0.94

3 16 0.0042 0.29 11.5 2.3 1 23 119 142 119 142 0.96

4 16 7.1 4.9e+02 1.4 2.3 2 12 150 160 149 162 0.87

5 16 0.00057 0.039 14.3 0.1 2 23 168 189 167 189 0.97

6 16 1.5e-05 0.0011 19.2 2.3 1 23 195 217 195 217 0.98

7 16 0.0079 0.54 10.7 2.9 1 23 223 245 223 245 0.98

8 16 0.76 53 4.4 2.8 2 20 331 349 330 357 0.94

9 16 0.00032 0.022 15.1 5.7 1 21 365 385 365 387 0.95

10 16 3.8e-08 2.7e-06 27.4 0.8 1 23 393 415 393 415 0.99

11 16 2.1e-05 0.0015 18.7 7.2 1 23 421 443 421 444 0.96

12 16 3.8e-07 2.6e-05 24.3 2.4 1 23 457 479 457 479 0.98

13 16 6.3e-05 0.0044 17.3 8.2 1 23 485 507 485 507 0.98

14 16 2.8e-05 0.0019 18.4 7.9 1 21 513 533 513 535 0.96

15 16 0.00016 0.011 16.0 1.8 2 23 542 563 541 563 0.97

16 16 6.2e-08 4.3e-06 26.7 3.7 1 23 569 591 569 591 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.1e-07	1.4e-05	25.1	1.2	1	23	63	85	63	85	0.99
2	16	0.0011	0.073	13.4	3.2	1	23	91	113	91	113	0.94
3	16	0.0042	0.29	11.5	2.3	1	23	119	142	119	142	0.96
4	16	7.1	4.9e+02	1.4	2.3	2	12	150	160	149	162	0.87
5	16	0.00057	0.039	14.3	0.1	2	23	168	189	167	189	0.97
6	16	1.5e-05	0.0011	19.2	2.3	1	23	195	217	195	217	0.98
7	16	0.0079	0.54	10.7	2.9	1	23	223	245	223	245	0.98
8	16	0.76	53	4.4	2.8	2	20	331	349	330	357	0.94
9	16	0.00032	0.022	15.1	5.7	1	21	365	385	365	387	0.95
10	16	3.8e-08	2.7e-06	27.4	0.8	1	23	393	415	393	415	0.99
11	16	2.1e-05	0.0015	18.7	7.2	1	23	421	443	421	444	0.96
12	16	3.8e-07	2.6e-05	24.3	2.4	1	23	457	479	457	479	0.98
13	16	6.3e-05	0.0044	17.3	8.2	1	23	485	507	485	507	0.98
14	16	2.8e-05	0.0019	18.4	7.9	1	21	513	533	513	535	0.96
15	16	0.00016	0.011	16.0	1.8	2	23	542	563	541	563	0.97
16	16	6.2e-08	4.3e-06	26.7	3.7	1	23	569	591	569	591	0.98

Sequence Information

Coding Sequence: ATGAGTGAATTAAATTTCGTAAAAGTAAAACAGGAGCAGGAGGAAGTGCCACTTGATGAGGACATAAGCTGTGATATGGATATTGGACCCATTAAAATAGAGCCTGAATCAAATGCATTGACGACGGGACAACCGGAGATGGAGCTCTCAGCTACTGTAGCCAAGAAACTCAGTAACTCCAAAACTTACCAATGTCCTCATTGTCCGCGACACTTTGAACGAAGCGATGAGCTAGCAATCCACATGCAGATTCACAGCGATAAGCTGCTATATAAATGCACATACTGCCCGAATAGTTTCTCTCATAAATCCGTTTTTACTATGCATGTGTACGGTCATACGGGTGAATTCCCTTTTCAGTGTACCCAATGCGAACAAAGATTCCTAAGGAACTGTGAACTGAAGAAACATGTACTTGTTGCGCACAGTGAAGTAAAACTGTCACAGACTTGTCCACTGTGTCCAAAGAATTGCAAACATACAAAGCCAATTAAAGATCTGAAATGTCCCCAGTGTGCTCGAGGCTTTACAAAGGGCTATGAACTACAAATACATCTGCAAATCCACAGCGATAAACTACCCTATAAGTGCCCCTACTGCCCGAACAGTTTTGCACATAAACCGAATTTTATGGCTCACATTTGTGAGCATACAGGGAAATTCCCGCACAAATGTCTGCAGTGCCTGCAGGGTTTTATGAAACGTAACGATCTCATGCTGCACATGAAGACTCATGTGGAAAACAGATCCATCAAGTTGCATGCTGTCCCACTTAACAGAAAGGAGCAGGCAAACGAGACCTACAGTGTTGCAGTAAAAGCTAAAAAAGATTCTGCAAAAATCAAGAACCCTACTGTACATGTTAAGGATATTACGAAAACAACCAAGATTAAAATTGAACCGAAACTAGAAACGATTCAAAGAACTCAAACTTGTACTGTAGTCAAAACGCTACCGAAAGAAAACCACAACAGCCGAGAGGATTCCTTAAAATGTAGAACTTGCAACAGACTCTTTGCAAACATAAATGAGCTGAAGCTTCATGAAAAATGCTTCACACACTCAAGGAAATACATACAAGGCGAGCGACCGCACAAGTGTCAATATTGTTTGAAGACCTTCAGCACAATCAATAACCTGACGGTGCATATGCGTTGTCATACTGGCGAGCGTCCCTATCAATGTCCTCACTGCCCGCGCACGTTCATCCAAAACTCTGGACTGCAGGTGCATATAAGGCAACATTCTGGCGAACGACCTTATAAATGTCCCCACTGTCCACGGGCATTTGCCAATAACTCGAATTGTAAGAAACATCTGAAGACACACCACACAGAAGACTCCGTCGAATTGAAGAGTGCCAATCCCTACAAATGTCCACATTGCCCAAGAACTTTTGCTCAGAACTCACATTTCATTGTTCATGTTCGCGGGCATACAGGTGAACGTCCCTATTGCTGTACACACTGCCCGAAGGACTTCAAAGTCAACCACGATCTGAAGAAACATTTGCGTAGCCATACGGGCGAGCGTCCATTTAAGTGTCCACATTGCCCGAAAACCTTTGCCCAGAACTCGCATTTTCATGCCCACATTCGCTGCCATTCGGACGACCGCCATTTAAAGTGTCCACACTGTCCAAGTACGTTCCTTAGGAGCTACAATCTGAAGGTTCACCTTAGCACGCATACTGGCGAACGGCCACACAAGTGTCCCCAATGTCCCAAAGATTTTGTTCAGAATTCTCATCTTAAAGCACATATGCGCAGACATTTAAAATCTGATTAA
Protein Sequence: MSELNFVKVKQEQEEVPLDEDISCDMDIGPIKIEPESNALTTGQPEMELSATVAKKLSNSKTYQCPHCPRHFERSDELAIHMQIHSDKLLYKCTYCPNSFSHKSVFTMHVYGHTGEFPFQCTQCEQRFLRNCELKKHVLVAHSEVKLSQTCPLCPKNCKHTKPIKDLKCPQCARGFTKGYELQIHLQIHSDKLPYKCPYCPNSFAHKPNFMAHICEHTGKFPHKCLQCLQGFMKRNDLMLHMKTHVENRSIKLHAVPLNRKEQANETYSVAVKAKKDSAKIKNPTVHVKDITKTTKIKIEPKLETIQRTQTCTVVKTLPKENHNSREDSLKCRTCNRLFANINELKLHEKCFTHSRKYIQGERPHKCQYCLKTFSTINNLTVHMRCHTGERPYQCPHCPRTFIQNSGLQVHIRQHSGERPYKCPHCPRAFANNSNCKKHLKTHHTEDSVELKSANPYKCPHCPRTFAQNSHFIVHVRGHTGERPYCCTHCPKDFKVNHDLKKHLRSHTGERPFKCPHCPKTFAQNSHFHAHIRCHSDDRHLKCPHCPSTFLRSYNLKVHLSTHTGERPHKCPQCPKDFVQNSHLKAHMRRHLKSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -