Basic Information

Gene Symbol
ct
Assembly
GCA_018904105.1
Location
JAEIFR010000001.1:5883478-5922877[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.2e-27 3.4e-23 81.3 0.0 3 72 479 549 477 554 0.95
2 3 5.1e-32 4.1e-28 97.0 0.0 3 76 987 1061 985 1064 0.96
3 3 2.4e-31 1.9e-27 94.9 0.0 3 77 1075 1150 1073 1152 0.96

Sequence Information

Coding Sequence
ATGCAATCGAATGTGGCACATGCCGATGGTGATCTGGATGATGATGATGATGATGATATGGAGCTGGAGCAGGAGCATGTTGCTGATGCCAGCAGCAGCAGCGGTGTTGCTGTCGCTGAGCAAACAGCAAGAACTGAAAGTGTTGCCGATGCGAAAGCAACAGCAGCAGCAGCAGCAGACGAAACAGAGCAGGATGAGGATGCAACAGTTGCTGGCGTCGATGTTGCCGCGATTAAAGCACTGCTGGATGAGCTGCAACGCCTGCGCGCCCTGGAGCAGACACATCTGATACAAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGAGGATGATGAGGAGAACGAGCATGATCGACGCAGTGATACCCTGCACGGTGTTGATGATGAGGATATGGATACATCCGCAGTGCATGTGCATGTGCAGCACGACGAGGATGAGGAGGAGGAGGACGATGAGGAGGAGGAGGAGGAGCACGATGAGCGGGATGCGGAGATGTCCAGTGCAGCGGCGAGAGCGGAGGGCAGCACCGAGCTAAAAATCAAAAAGGAGCAGCACAGTCCACTGGATCTGAACGTGCTCAGTCCACAGTCGGCGATCGCAGCTGCCGCGGCCGCAGCAGCCGCTGCCTGCGCCAATGATCCCAATAAATTCCAGGCATTGCTGCTGGAGCGGACCAAGGCACTGGCCGCGGAGGCGCTTAAGAATGGCGCCTGTGAGGCCGCTAGCGAAGGCGGCGCCGGAGGAGGAGGAGATTCCAATTCATCCAGCGCCAACAGCACACCCAATCCAAGCACAGTCCAATTGGCCGCAAGCCTGGCCAGCACATTGAATGGCAACAAGTCGCTGTTGCAGCAGGCAGCAAATGTTGCTGCCGCCGCTGTGGCCGAGGACAATGCCGGCAGCAGCAGCAGCAATGCCAATGCTGCCGCTGTGATGGCTGCCCATGCACAGCATGCAGCCGCTGCCGCCGCCCTCGGTGCACCCACATTCATGCCCAATCTGCCCAATTTGCCCAGTCTGCCGGCATTCCAATTTGCCGCTGCCGCTGCAGCTGGACAGGATCCGCGTGCGCATTTCCGTTTCGCCGATGCGGAGCTGCAGCTGCAGCCCGGCGTATCGATGGCTGGACGTCTGGGTGAGTCACTCATCCCGAAGGGGGATCCAATGGAGGCCAAGTTGCAGGAGATGCTGCGCTATAATATGGATAAATATGCCAATCAGGCACTGGACACCCTGCACATCTCACGACGTGTGCGGGAATTGCTCTCGGTGCACAACATTGGCCAGAGATTGTTTGCCAAATACATTCTGGGCCTGTCGCAGGGCACCGTCTCGGAGCTGCTGAGCAAACCGAAGCCATGGGATAAGCTGACGGAGAAGGGACGCGACAGTTATCGCAAGATGCATGCCTGGGCGTGTGATGATAATGCGGTTATGCTGCTCAAGTCGCTCATACCCAAGAAAGACTCCGGCTTGCCACAATATGCTGGTCGCGGCGCTGGCGGCGATGATTCCATGTCAGAGGATCGAATTGCACACATACTCAGCGAGGCATCGTCGCTGATGAAAAGCAACGCCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCGTCACGAGGATCTCGCACAGGATAAGATGGCGCGTCTCTATCAGGAGCTGATGGCGCGCACGCCACGCGAAGCAGCCTTTCCAAGCTTCCTTTTCTCTCCCCTCTTTGGCGGCGCTGCCGGCATGCCCGGCGCAGCGGCCAATCACTTCCCCGCCATGGCCGCCGATGAGAATATGCGTCACGCTGTGGAACGTGAAATCGCCAAGCTGCAGCAGCAGCATCAGCAACAGGCGGCACAAGCGGCACAGGCACAGGCTGCCAGTTTCCCCAACTTCTCCAGCCTGATGGCACTGCAGCAGCAGGTGCTGAACGGAGCACAGGATTTGTCGCTGGCCGGCAAAGAGATCAAGTTGAATGGACAGCGATCCTCGCTGGATGCGCACAGTGGCGGCAGCAGCGGCAGCAGTTGCTCCAAGGATGGCAACAATGAGCGTGATGGCAACGATAGCTTTGGCAATGCATCCAGATCGCAGCATCCGAGCATGAAGAGCGAGGGCAGCGGTGGCACACCCGCACCACCTGCCCCGCCAGCACCACCAGCACCGCCAGGCAGCAGCAATCCGGTGGCAATTGCCGCCGCTGCTGCTGCTGCCGCTGGGGGCAATAATTCCGCAGCGCCCAGTCCCCTCAGCAATTCCATACTGCCGCCAGCCTTGAGTAGCCAAGGTGAAGAGTTTGCGGCCACAGCAAGTCCGCTCCAGCGCATGGCATCCATCACGAACTCCCTGATCACTCAGCCCCCTGTGACGCCGCATCATTCGCAGCCACAGCGACCCACCAAGGCGGTGCTGCCGCCCATAACCCAACAGCAATTCGATATGTTCAACAATCTGAATACGGAGGATATAGTGCGTCGTGTCAAGGAGGCATTGTCCCAGTATAGCATCTCGCAGCGACTCTTTGGGGAGAGTGTGCTGGGTTTGTCACAGGGTTCTGTCTCTGATCTCTTGGCACGTCCCAAGCCATGGCACATGCTCACCCAGAAGGGACGCGAACCCTTCATACGCATGAAGATGTTCCTCGAGGATGAGAATGCAGTGCACAAGCTGCATATGTCGCCCACAGTGTACGAGATGGCTGCACTTACTCAGGATCTGGACACACACGATATAACCACCAAGATCAAGGAGGCTCTGCTGGCCAACAACATTGGCCAGAAGATCTTCGGGGAGGCTGTGTTGGGCCTGTCGCAGGGCTCCGTCTCGGAGCTGCTGTCCAAGCCAAAGCCCTGGCATATGCTCTCCATCAAGGGACGCGAACCCTTCATCCGCATGCAGCTCTGGCTGAGCGATGCCAACAATGTGGAGCGGCTGCAGGTGCTGAAGAACGAGCGCAGGGAGGCGAGCAAGCGGCGTCGCAGCACCGGACCCAATCAGCAGGACAATAGCAGCGATACGTCCAGCAATGATACAAATGATTTCTATACCAGCAGTCCGGGACCAGGATCGGTGGGTTCATCGGTGAGTGGAGCACCGCCCAGCAAGAAGCAGCGTGTGCTCTTCTCCGAGGAGCAAAAGGAGGCACTGCGTCTCGCTTTTGCTCTGGATCCGTATCCCAATGTGGGCACCATCGAGTTTCTGGCCAACGAGCTCAGCCTGGCCACACGCACCATCACCAATTGGTTCCACAATCATCGTATGCGTCTCAAGCAGCAGGTGCCGCATGGTCAGCCCGGTCAGGATAATCCCATCCCGAGTCGGGAGAATACAAATGCCACACCCTTTGATCCCGTCCAGTTTCGCATACTGCTGCAGCAGCGTCTGGTTGAGCTGCACAAGGAACGCATGGGTCTAAGTGGTGCCCCCATACCATACCCACCGTACTTTGCTGCAGCGGCTCTGCTGGGCCGCAGCTTGGCCGGCATACCGGGTGCAGCGGCAGCAGCGGGTGCAGCAGCAGCTGCGGCAGCTGCAGTTGGTGCCGCTGGCGGGGATGAGTTGCAGGCACTGAATCAGGCATTCAAGGAGCAAATGAGTGGGCTGGATCTGTCTATGCCCACACTGAAGCGGGAACGCAGCGATGACTATCAGGATGAGCTGGAAATGGATGCAAGTGCGCATAATATGAGTGACAGCGAATCTATCGAAGGTGCCGGCGTGCATGATGCACAGCTGGAGAGTTCCGCCGTCTCCGAGTACGAGAAGGTGTTGCAGAAGTCGGCGCTGGCCTCGGCAGCAGCTGCTGCTGCCTACATGAGCAATGCAGCACGCAGCTCAAGGCGTAAGCCGGCAGCACCACAATGGGTTAATCCAGCTGGAGCCAGTACACCCATTGCAGCCGGTGCAGCAATTGTTGCTGCTGCTGCTGGTGGCGAGAGCAACAACAACAGCGGAGCCAGCGAGCGCATCATCAATGGCGTCTGCGTTATGCAGGCTTCGGACTATGGACGTGGCGATGATGGCGACGATAGTGTCAAGGGCGATGCCAGCGTAGACGCTGAGCACGGTGATCATTCGCATCTGGAGATCGAGCAACGTTTCATGGAGCCGGAGGACCCCTATGGAACCTCTGGTATGGAAAACTTCGTCAAAAATCATCCGATTTCCTTGGGAGATAGCATTTTCTTCATGATTCGAACTGTGGATTGA
Protein Sequence
MQSNVAHADGDLDDDDDDDMELEQEHVADASSSSGVAVAEQTARTESVADAKATAAAAADETEQDEDATVAGVDVAAIKALLDELQRLRALEQTHLIQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDDEENEHDRRSDTLHGVDDEDMDTSAVHVHVQHDEDEEEEDDEEEEEEHDERDAEMSSAAARAEGSTELKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGACEAASEGGAGGGGDSNSSSANSTPNPSTVQLAASLASTLNGNKSLLQQAANVAAAAVAEDNAGSSSSNANAAAVMAAHAQHAAAAAALGAPTFMPNLPNLPSLPAFQFAAAAAAGQDPRAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRIAHILSEASSLMKSNAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRHEDLAQDKMARLYQELMARTPREAAFPSFLFSPLFGGAAGMPGAAANHFPAMAADENMRHAVEREIAKLQQQHQQQAAQAAQAQAASFPNFSSLMALQQQVLNGAQDLSLAGKEIKLNGQRSSLDAHSGGSSGSSCSKDGNNERDGNDSFGNASRSQHPSMKSEGSGGTPAPPAPPAPPAPPGSSNPVAIAAAAAAAAGGNNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELEMDASAHNMSDSESIEGAGVHDAQLESSAVSEYEKVLQKSALASAAAAAAYMSNAARSSRRKPAAPQWVNPAGASTPIAAGAAIVAAAAGGESNNNSGASERIINGVCVMQASDYGRGDDGDDSVKGDASVDAEHGDHSHLEIEQRFMEPEDPYGTSGMENFVKNHPISLGDSIFFMIRTVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01558933;
90% Identity
iTF_01558933;
80% Identity
iTF_01558933;