Basic Information

Gene Symbol
Kdm5
Assembly
GCA_018904105.1
Location
JAEIFR010000296.1:259503-265321[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.9e-26 6.5e-23 80.8 0.1 2 89 230 313 229 313 0.95

Sequence Information

Coding Sequence
ATGTCCGGCAAAGCCGAGGCGGACATTTTAGCCGCCATCGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCTCTGTGGAGCGTCCAATGCCGAGCGTGCCGATGAACCATGCCAGCAGTAGTGTCTCGGCGAGCAAGAAGTACCACAATAGCTGTCCCCATCCTACGCCTAGTGTGCACAAGAAAACGCTGCACACGAAGCCGCACAGCAGTAATAAATTCGATCAGGGCAAGAATGAGGAATTCCATTTTGATACACCTCCAGAGTGTCCAGTCTTTCGACCCACTGCAGAGGAGTTTAAAAATCCTTTGGCCTACATTAGCAAAATTCGTTCCATAGCAGAGAAATGTGGCATTGCCAAGATATTGCCACCGGAGAAATGGTCACCACCATTTGCCGTGGATGTTGACAAATTGCATTTTGTACCGCGCGTGCAACGTCTCAACGAACTGGAGGCCAAGACAAGGGTAAAGCTGAATTTTCTGGATCAAATTGCCAAATTTTGGGAACTGCAAGGTGCTTCACTCAAAATCCCGATGGTAGAACGCAAGGCACTCGATCTGTATACACTGCATCGCATCGTCCAGGAAGAGGGAGGCATGGAGCAGACGACTAAGGAACGTAAGTGGGCCAAGGTTGCGAATCGCATGCAATATCCATCGAGCAAAAGTGTTGGAGCCACCTTAAAGGCACATTATGAGCGAATTTTGCATCCATTTGAAGTCTACACTTCTGGAAAGGTTCTGGGACCTGGAGCTGCTGGTGCTTCAGCGACAGTTACGCCGGTTAAGCTTGAGGATAGTGGCACAGATTACAAGGCCCATGAGATACCTACACGCCAGCAGATTGCACCTCCAAATGAGAACAATACGCGTCGTTCGAAGCGATTTGGTAACTCCAATGCCAGCTGTGGTCTTATACAGCCAGCGACAAAGTCAGGAGCAGGAGTACCTCCCATTACCATTAAAACCGAAACTAAGGAGGATTTTAAACGCGATCTATTGAGCAGCTTCAATGCAGTCAATACGTCTGGTGGTGCAGCGGCAGCAAATAATGCGTATCAGGGCGGAGCAGGTGCAGCCACACCGAATACACGCGCCACCCAAAAGAAAGCGTCTACCGCGGAGTTACAGCCACCAACTGCGCCGCTTATCGATCCACTCATGAAGTACATCTGTCATATCTGCAATCGTGGCGATGTCGAGGAATCTATGCTTCTCTGCGACGGATGTGACGACAGCTATCACACCTTTTGCCTGCTGCCGCCACTGAGCAGCATTCCAAAAGGTGAATGGTTATGCCCACGTTGCGTTGTAGAGGAGGTTAGTAAACCGCAGGAAGCCTTTGGATTCGAGCAGGCCGAGCGTGAATACACACTGCAACAATTTGGCCAGATGGCGGATCAGTTCAAGCAGGAATATTTCCGTAAACCGGTGCACATGGTGCCCACAGAGCTGGTTGAGCGAGAATTCTGGCGTATTGTGTCCTCTATTGATGAGGATGTGACTGTTGAATATGGCGCCGATCTGCATACAATGGATCATGGTTCTGGTTTCCCCACCAAGAGTTCATTGTACTTGCTGCCAGGAGATCAGGAATATGCCGAGTCTAGCTGGAATTTGAATAATCTGCCGCTTCTAGAAGATTCGATACTGGGACACATTAATGCAGATATCAGCGGGATGAATGCACCCTGGATGTATGTTGGCATGTGTTTTGCTGCCTTCTGCTGGCATAACGAGGATCACTGGAGCTATTCAATTAACTATTTGCATTGGGGTGAACCAAAGACCTGGTACGGTGTGCCCGGCTCCTGTGCCGAACAATTCGAGGAGACAATGAAGCGTGCCGCACCAGAATTGTTCTCCTCACAACCAGATCTACTGCATCAGTTGGTCACTATTATGAATCCCAATATTTTGATGAATAACGGCGTTCCGGTTTATCGCACGGATCAACATGCCGGAGAATTTGTTATCACATTTCCACGCGCCTATCACGCTGGCTTCAATCAGGGTTACAACTTTGCCGAGGCCGTGAATTTTGCTCCAGCTGATTGGTTAAAGATGGGCAGGGAATGCGTTAATCATTACTCAATGTTGCGTCGCTTCTGTGTTTTCTCGCACGATGAGCTTGTCTGTAAGATGGCTCTGGAGCCGGCTAAGCTGACCTTTGGCATTGCCACAGCTTGTTATATTGACATGGCCGAAATGGTTGATACCGAAAAGAAATTGCGTAAATCTTTATTGGAATGGGGTGTCACACGGGCCGAAAGACGCGCCTTTGAACTGGTCAATGATGATGAGCGACACTGCCAGGAGTGCAACACAACCTGCTTCCTGTCAGCCGTAGCCTGTGAGTGCAATGACAAGTTAATTGTCTGTCTGCGACATTATACAGTCCTCTGCGGTTGTGCCCCAGAGAAGCATACTCTAATCTATCGCTACACCCTGGATGAGATGCCACTCATGTTGCAGAAACTAAAGGTCAAGGCACATAGCTTTGAGCGTTGGCTCTCGCGTTGCCGTGACATAGTCGATGCCCATACTCCCACATCCGTGACGCTGACCGAACTGCAGGAACTCTGCAAAGAAGCTGAGACCAAAAAGTTTCCCTCTTCGCTTCTTATCGATCGCCTTAATGCGGCAGCCATCGAAGCAGAGAAGTGCGTAACGGTCATTCAACAGCTGGGTATCAATAAGGTACGCACACGATCGGATCACAATCAGGAGGCAGCGCAGTACAAGCTGACGATGGAGGAACTAGAGCTATTTGTACAGGAGATTGATAATCTGTGCTGCATCATTGATGAGGGTGCCTCGGTGCGTGAGCTTCTGGTGCTCGGTAGGCAATTTGTGGAGCGTGCAGATACGCAATTGCAGTTGACACTGGAAGCCCTCGAGGAGAACGATCTGGAGACGCTGATCAATGAAGGCAGCTCGCTGCGCATTGAACTGCAGCAATTGGATCAACTGCAGAAGCGTCTGAAGCAGTGTAAATGGTACAAACGTTCGCAAGGATTGCGCGAAACTAGCTCCAAGCTAACCTATAGCGATGTGAAGGCACTGCTACATACAGCTGCTGCGGATTTAGATCCCACGGATCCGTATGTGGATCGAGAGATGCGAAAGTTGCAACAAATTGGTGCAGCAATTGAAGCTTGGGAATCACAGGCTGCCAAATATTTCCGTCGTCTAAATCAACAGCATCAGTTGACGGAGATTGAGCAGTTTCTGAAATCCGCCAGCGATATAAATGGTCAAGTGCCGTCACATGGTCTGTTAAAGGATGCATTGCGCAAGGCCAGGGAATGGCTGCGCTCGGTGGAGCAGCTGCAGCAAAACAATCATGTCACCTACTGTCACACGCTGGAGGCAATGATTGAACGTGGACTAAGTATACCCATACAGCTGGAGGAGCTTAGTCGAATGCAGGGTCATTTAAAGAGTGCTCACGATTGGAAGGAGAATACGGCCAGGGCGTTCCTGAAGAAGGGCACCTTTTATACGCTGCTAGAGGTGCTGATGCCGCGGGCAGATGCCATTAACATTGACTCGGATCTCAAGCCGCGTTTCCAAGATGATTTCCTAAAGGATAAGAATCCCACCGAAATTGTGGCCAGCTTCAAGCATGCCGAGGAGCAGGAGTTGCGAGATATGCGTGACCTGCGGCGACAAAATCTGACCAAGAATCCCATGCGCGATGTCTTCTGCCTGTGCAAGTCCGAGTTTCGCGGCGTGATGCATAATTGCCAGCTGTGCCGAGATTGGTTTCACGAAGATTGTGTGCCTCCTCCAGTGCAATCACCAACACTACAACAGAACGGTGGAACAATTAACGGTGGCGTCTCGGTGCATGCCACGCAACCGAAATGGCTGTGTCCCAGCTGTGTGCGCTCAAAGCGACCGCGGCTGGAGACCATCTTGCCGCTTCTCGTCCAGCTGCAGCAGCTGCCCATGCGTTTGCCCGAGGATGAAGCATTGCGTTGTCTGGCAGAGCGTGCCATGAACTGGCAGGATCGAGCACGTAAAGCCCTGAGTAGTCCTGATGTTAGTGCCGCTGTGGAGGCCATAATGGCTCAACATCAACAGAAACGTCGCTCCAACGATAGCCACATCGTGCTGGGCAACATCAGTAGTCCGCGTAAGCCACGTCGCCTGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACTCATCAGCCCAGAACCAAAACAATGGCAGCAGCGTTGACAGCGGCGTCGGCAGCACTGATCTCTTAAAGCTGCTCTCCGACAGTGAAATTGAGAATCTGCTAGAGCTTATGATGGAGGGTGATCTCCTAGAGGTGTCACTCGATGAGACGCAAGAACTCTGGCGTATACTGGAAACAATGCCGCCCACAATGTTGCAAGCCGAGGCGAAGTCGCGGGTGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCGTGGTTGCCTCCGCTTCGAGCATAAACAGCGGCGCTGAGGATTCCAATGATAGCCTGCTGGTGCAGAATAGTCCAAGTCCTGGTACTGGCACTGGCACCGCTGGACGTGGAAATAAGAAGCGACGTTCGAATGATGCAAGCAGCGGTAATGCTGCTGTGCCGCGCAAGAAGCAGCAGACACCCAAACAGACGCCGGGTAAGAAGGCAACACCTGGCAAGAAGGCAAGCAGCAGTTCACCCGGTGTTGATGCGGATGCGGAAAATAAGCAGGCTAACGGTGGCAACACCACAACATCTACAGTTGCAGGCGCTGCGACTGGTGGCAGTGGTGGTGCTGGTGCTGGTGCTGCATCTGGCGCTGGCACACCCACACCGACGCCGGCGAGCCACAAGAAACGCAAACGCACCACCACGACAAACAACAACAATAATAACAACAACGGAAATGCCAGCGCAACACCCACATCAGTTAATAGCGGCAGCAATAATAATAACAATGCAACGCCGGCAGCAAGTGGTGGCCAAAAGAAGCACGCGCAACGCACACAGCAAACGGCACAAGAGGACGACGAGGAGGAATGCCGGGCCGAAAATTGCCACAAGCCAACGGGACGTGAGGTGGACTGGGTGCAATGCGACGGTGGCTGCAATGAATGGTTCCACATGTACTGCGTGGGACTCAATCGTAGCCAGATCAAGGCAGACGACGATTACATTTGCATACGCTGCTCGAAGACTGTTAGCGTGGGCGTCGCTGCTAGCGGCAGTAGTTTAACAGTGACGGCAACAAGTAACAGCACGTTAACATTGAGCGCAACAGCGACGCCGGGCAAACAGCGAGCAGCACAGTCGGCGCGGTAG
Protein Sequence
MSGKAEADILAAIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVERPMPSVPMNHASSSVSASKKYHNSCPHPTPSVHKKTLHTKPHSSNKFDQGKNEEFHFDTPPECPVFRPTAEEFKNPLAYISKIRSIAEKCGIAKILPPEKWSPPFAVDVDKLHFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGASLKIPMVERKALDLYTLHRIVQEEGGMEQTTKERKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGPGAAGASATVTPVKLEDSGTDYKAHEIPTRQQIAPPNENNTRRSKRFGNSNASCGLIQPATKSGAGVPPITIKTETKEDFKRDLLSSFNAVNTSGGAAAANNAYQGGAGAATPNTRATQKKASTAELQPPTAPLIDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLSSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHMVPTELVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKRAAPELFSSQPDLLHQLVTIMNPNILMNNGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLTELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGRQFVERADTQLQLTLEALEENDLETLINEGSSLRIELQQLDQLQKRLKQCKWYKRSQGLRETSSKLTYSDVKALLHTAAADLDPTDPYVDREMRKLQQIGAAIEAWESQAAKYFRRLNQQHQLTEIEQFLKSASDINGQVPSHGLLKDALRKAREWLRSVEQLQQNNHVTYCHTLEAMIERGLSIPIQLEELSRMQGHLKSAHDWKENTARAFLKKGTFYTLLEVLMPRADAINIDSDLKPRFQDDFLKDKNPTEIVASFKHAEEQELRDMRDLRRQNLTKNPMRDVFCLCKSEFRGVMHNCQLCRDWFHEDCVPPPVQSPTLQQNGGTINGGVSVHATQPKWLCPSCVRSKRPRLETILPLLVQLQQLPMRLPEDEALRCLAERAMNWQDRARKALSSPDVSAAVEAIMAQHQQKRRSNDSHIVLGNISSPRKPRRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSSAQNQNNGSSVDSGVGSTDLLKLLSDSEIENLLELMMEGDLLEVSLDETQELWRILETMPPTMLQAEAKSRVAXXXXXXXXXXXXXXXPVVASASSINSGAEDSNDSLLVQNSPSPGTGTGTAGRGNKKRRSNDASSGNAAVPRKKQQTPKQTPGKKATPGKKASSSSPGVDADAENKQANGGNTTTSTVAGAATGGSGGAGAGAASGAGTPTPTPASHKKRKRTTTTNNNNNNNNGNASATPTSVNSGSNNNNNATPAASGGQKKHAQRTQQTAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICIRCSKTVSVGVAASGSSLTVTATSNSTLTLSATATPGKQRAAQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01557342;
90% Identity
iTF_01554466;
80% Identity
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