Basic Information

Gene Symbol
XBP1
Assembly
GCA_018904105.1
Location
JAEIFR010000295.1:13341415-13342451[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.7 1.5e+03 -0.9 0.0 9 25 59 75 55 77 0.78
2 3 3.6e-15 3.2e-12 46.1 14.2 2 65 80 143 80 143 0.97
3 3 0.00011 0.096 12.6 5.2 30 62 129 161 127 163 0.83

Sequence Information

Coding Sequence
ATGGCGCCACCAAACGGAGTACTATTATCAAAGTGTGTGTCGGTGGGAACGAATTTAATATTACCAAAGCTGCGGCCCGCACCTCTCACAGCTGCTATCTTGCTGAAGGGAGGGGCGTCGCCGTCCAGCTCAGGATACGCTTCGTCATCCAACAGTGTAGCGGATGAGGAGACAATGGCATCGAATGTGGCTGCGCCCACGAAGGCCAAGAAGCGTCGTCTGGATCATTTATCCTGGGAAGAGAAAGTGCAGAGAAAGAAACTCAAGAATCGGGTAGCCGCACAAACCAGTCGCGACCGCAAGAAGGCCCGCATGGAGGAAATGGAATATGAAATCAAAGAACTGGCAGAGAAATCGGAAATACTTCAAAACAAATGCGACAGCTTGCAGAGCATCAACGAGTCTCTGCTGGCTAAGAATCAAAAGCTCGACTCAGAAGCAGAGCAACTGCGACAAGAACTTGCCGAACTGAAGGAACTGGTTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGCTGAGGGCTGTGCGTCCACACTCACTGGATCTGCAGCATCCAATGCTGACCCTCTGCAGCAGGGTACACAAGTGGACACACAGTCGTCAGCGCATGTGCTGACACCGAAAATGTTGCAACAGCAGCTGAAACAGAGCAACACAACAGCCTCGCTCTGGAGAATTGTTGCCCTCTGCCTTCTATACAAGACATGTTGCTCGTCGACGTTGAAGAGTTCGATGCGCGACGACTTGAAGAGCTGGCCGAGAGCTTGCTCGCAGATATCACAGCAGACCTGGAAACAGGTGGTGGCACATGCGACGAAGCTCCTGCCCAAATTGCAGGCGACGCAGAGCGATTGTCTGGATCAATGGTGGGGTCCGCAGCAGAGTGCATGGAATCCAGCGGAAATAGAGCTGATGGCCTAG
Protein Sequence
MAPPNGVLLSKCVSVGTNLILPKLRPAPLTAAILLKGGASPSSSGYASSSNSVADEETMASNVAAPTKAKKRRLDHLSWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEYEIKELAEKSEILQNKCDSLQSINESLLAKNQKLDSEAEQLRQELAELKELVKXXXXXXXXXXXXXXXXXXXXXXXXAEGCASTLTGSAASNADPLQQGTQVDTQSSAHVLTPKMLQQQLKQSNTTASLWRIVALCLLYKTCCSSTLKSSMRDDLKSWPRACSQISQQTWKQVVAHATKLLPKLQATQSDCLDQWWGPQQSAWNPAEIELMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01552203;
80% Identity
-