Basic Information

Insect: Zaprionus taronus
Gene Symbol: -
Assembly: GCA_018901805.1
Location: JAEIFH010000596.1:2073261-2075967[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.4 29 5.3 4.6 2 23 347 369 346 369 0.93

2 12 3.2 2.3e+02 2.5 0.0 1 23 376 401 376 401 0.91

3 12 0.079 5.7 7.5 4.2 3 23 413 433 412 433 0.93

4 12 3.7 2.6e+02 2.3 3.2 2 17 444 459 443 470 0.76

5 12 8 5.7e+02 1.2 0.7 3 23 474 495 473 495 0.90

6 12 0.016 1.1 9.7 0.3 3 23 503 523 501 523 0.95

7 12 0.00081 0.058 13.8 0.2 1 23 531 554 531 554 0.98

8 12 0.00018 0.013 15.9 0.4 2 23 559 580 558 580 0.97

9 12 2.5 1.8e+02 2.8 0.2 1 20 588 607 588 609 0.85

10 12 0.00043 0.031 14.7 0.4 1 22 628 649 628 652 0.90

11 12 0.57 41 4.8 0.5 3 21 659 677 659 678 0.90

12 12 0.0095 0.68 10.4 0.7 1 23 697 722 697 722 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.4	29	5.3	4.6	2	23	347	369	346	369	0.93
2	12	3.2	2.3e+02	2.5	0.0	1	23	376	401	376	401	0.91
3	12	0.079	5.7	7.5	4.2	3	23	413	433	412	433	0.93
4	12	3.7	2.6e+02	2.3	3.2	2	17	444	459	443	470	0.76
5	12	8	5.7e+02	1.2	0.7	3	23	474	495	473	495	0.90
6	12	0.016	1.1	9.7	0.3	3	23	503	523	501	523	0.95
7	12	0.00081	0.058	13.8	0.2	1	23	531	554	531	554	0.98
8	12	0.00018	0.013	15.9	0.4	2	23	559	580	558	580	0.97
9	12	2.5	1.8e+02	2.8	0.2	1	20	588	607	588	609	0.85
10	12	0.00043	0.031	14.7	0.4	1	22	628	649	628	652	0.90
11	12	0.57	41	4.8	0.5	3	21	659	677	659	678	0.90
12	12	0.0095	0.68	10.4	0.7	1	23	697	722	697	722	0.96

Sequence Information

Coding Sequence: ATGTCGGAGAATTTGAAAATAAATAGCGGAACTGGGCCTAGCTGCCTGCATTGCAGAGTGCACAATTCAAAGCAGCCGTATCAGGAGATATTCGATGAGGTGGGCGTGGAAATCGAACTGGCCGATCTGCTGGCCAAATATTTTCAGATACATGTTAAACCCGATCCTCAAAAGCCGCAACTGCTGTGCCAGGAGTGCGTGAAAACGCTAATTCGATTCTTCGACATCGACGAACTGCAGCGGGAACAGGATGCTGCTTCTAAAAAGGGTACTCGCATTGTGGCAGCCCCTGTGTCTGTGGCGACGCCCGTTGCCAAGAAGGAAGCAAAGGTTGTAAAACAGACGCCGCCGGCTCCAAAAACCATTGTTGAGTCAAAAACATTACCCCTTGCGTCCAAAAAGTTGATCGCTCCAGCCGATTTGCACCCTGCAAAGTCCGGGTGTAGTGTAACTCCAACACAAGCAATTTCCATACGTATAACCAAGGCAAAATCTCAAGCTACGGCGCCTAAGCGTTTGCAGATTACACCCAAGGGAAAAGTTAGCGAAGCTGCTGCGGGAAAAGGTAGAAAAGCTAGAGAAGGTGACCAGGAGCAGATTAGTGCTTTGATACGTGACATACTCGACGACGAGGAGTCGCCGCCCGATGACAAATTCGCTGAGGCAGCTGCCACAGTGCGTCAACTGGAGACGCAGGCTGTTGAAGAGCAAGAGCAGGAACAAGAACAGGAGCAGGAGGCAATTGTCGAGAAGTTGCATGAGGAGCAGCAGCAAGAGCCCGAAAATGACGAGGAGTTGGAGTTCTTAGTTGAGCAAGATGATGATTCATCCGAATCTGATCAGTTTAAAGTGGTTAAGAAGGCATATCCAGATGATTCGCAGTCGGCAAACGAAACGCAAAGTGAGGATGAGTCTCTTAAAGTGGAACCATTCAATTTCGTGTTGATCAAGGAATCGGATGGCATTGATGACTTGCTTGAGTACTTGGGAACTGTGGTGAAGACTTGCTTCGAGACTCTAACCTTCGATTGGGCCACTGTGTGCCGGCACTGCACCTTGAAATGCAGTAAATACGAGAACTTGCTGAACCATGTGCTTAACCGGCATCAGCTGCCGGAGGAGCGCTACAAATGTCCCATAGACGGCTGCACAGCAGAGCTGAAAGGCCGCAAATTTCTGGCCATGCACTTGGTTGTATTGCATGCGCCAGTGGCAGAAATTCCCATCTATGGCTGTTGTCCCGAATGCAACATGACCTTCTCCAACATATTGCAGTACAACAAGCATTCCTGCGCCCATGTAATCAAGAAGCGTCGTGGCATACGCTTGTACTGCGAGATGTGTGGCATTGAATTCCCCTCCTGGAAGCGTTTCAATTTCCACAATCAATTCCATCTGGAGCGACACAGGCCACGCGCCTGTTTCGTGTGCAACTATGCAAACAACAACATTGACGATCTCTTCCAGCACTTGCACTACTCCCACGAGCCCGAGGGCACGCTCTTTTGCGATCTCTGCGATCGCAACTTTCGGGATGCAGCCGTTTTTATGGAGCACAACAAGTCGCATGCCAATGTCAGCAGCACCACTTACAGCTGCGGCGAGTGCAGCGCCAACTTCGAAACACGCGGACGCCTTAACGGTCATATGCGCTCCATACATGGCTGCATTATTAAGTGCGAGTTGTGCAGCCGCGAGTTTGCCTCTGAGGCCACGTTCAACATCCACATGAAGAAGCACTTGATTATCGAGCGCGAGGTGCACGTTTGCAACAACTGCGGCATGCTCAGTGAGAATCACGATAAGATGTTGGCCCATGTGGAGAACGAGGAGTCGCCTTGCTTTGGCGTCGATATCTACGTTGAACTGCTGCGTGATGCTTACATCTGTGAATACTGCTCGGCATACTTCAAGCAGAAGACCGATCTACGCGCCCATCGCGATTCAGGCGTGCACAAGAATGGCATGTTCTGGTGTCAACCGTGTGAAAAGGAGTTTGCGGACATGAAACTCTATCGGCATCATCTGCGCAACTATCAGCTACAGCGTGCCGATGTGGAGCATCGTAAACTAGAGATTTGTCTGTACTTTATGTGCGACTTTGAGGATTGCCTGGAATCGTACATCAATTGGAATTCGTTGTACACGCACAAGCGGCGTACACACGAATCAGGCGAGAAAAATGGAAGCCAAAACGAAAGTGGATGA
Protein Sequence: MSENLKINSGTGPSCLHCRVHNSKQPYQEIFDEVGVEIELADLLAKYFQIHVKPDPQKPQLLCQECVKTLIRFFDIDELQREQDAASKKGTRIVAAPVSVATPVAKKEAKVVKQTPPAPKTIVESKTLPLASKKLIAPADLHPAKSGCSVTPTQAISIRITKAKSQATAPKRLQITPKGKVSEAAAGKGRKAREGDQEQISALIRDILDDEESPPDDKFAEAAATVRQLETQAVEEQEQEQEQEQEAIVEKLHEEQQQEPENDEELEFLVEQDDDSSESDQFKVVKKAYPDDSQSANETQSEDESLKVEPFNFVLIKESDGIDDLLEYLGTVVKTCFETLTFDWATVCRHCTLKCSKYENLLNHVLNRHQLPEERYKCPIDGCTAELKGRKFLAMHLVVLHAPVAEIPIYGCCPECNMTFSNILQYNKHSCAHVIKKRRGIRLYCEMCGIEFPSWKRFNFHNQFHLERHRPRACFVCNYANNNIDDLFQHLHYSHEPEGTLFCDLCDRNFRDAAVFMEHNKSHANVSSTTYSCGECSANFETRGRLNGHMRSIHGCIIKCELCSREFASEATFNIHMKKHLIIEREVHVCNNCGMLSENHDKMLAHVENEESPCFGVDIYVELLRDAYICEYCSAYFKQKTDLRAHRDSGVHKNGMFWCQPCEKEFADMKLYRHHLRNYQLQRADVEHRKLEICLYFMCDFEDCLESYINWNSLYTHKRRTHESGEKNGSQNESG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -