Basic Information

Insect: Zaprionus taronus
Gene Symbol: -
Assembly: GCA_018901805.1
Location: JAEIFH010000387.1:3946726-3954052[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00016 0.011 16.0 3.4 1 23 217 239 217 239 0.98

2 10 0.00078 0.056 13.9 10.5 1 23 246 268 246 268 0.96

3 10 7.9e-05 0.0056 17.0 6.5 1 23 274 296 274 296 0.98

4 10 0.00024 0.017 15.5 2.3 1 23 302 324 302 324 0.95

5 10 1.7e-05 0.0012 19.1 0.5 1 23 330 352 330 352 0.97

6 10 1.1e-05 0.00081 19.6 0.1 1 23 358 380 358 380 0.98

7 10 9.6e-05 0.0069 16.7 2.0 1 23 385 408 385 408 0.97

8 10 0.04 2.9 8.5 0.3 1 23 414 437 414 437 0.94

9 10 0.00013 0.0093 16.3 0.1 1 23 496 518 496 518 0.98

10 10 0.0034 0.25 11.8 4.9 5 23 602 620 594 620 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00016	0.011	16.0	3.4	1	23	217	239	217	239	0.98
2	10	0.00078	0.056	13.9	10.5	1	23	246	268	246	268	0.96
3	10	7.9e-05	0.0056	17.0	6.5	1	23	274	296	274	296	0.98
4	10	0.00024	0.017	15.5	2.3	1	23	302	324	302	324	0.95
5	10	1.7e-05	0.0012	19.1	0.5	1	23	330	352	330	352	0.97
6	10	1.1e-05	0.00081	19.6	0.1	1	23	358	380	358	380	0.98
7	10	9.6e-05	0.0069	16.7	2.0	1	23	385	408	385	408	0.97
8	10	0.04	2.9	8.5	0.3	1	23	414	437	414	437	0.94
9	10	0.00013	0.0093	16.3	0.1	1	23	496	518	496	518	0.98
10	10	0.0034	0.25	11.8	4.9	5	23	602	620	594	620	0.92

Sequence Information

Coding Sequence: ATGTGCGCTGCACAGAGCAACCCGCCGCCCTTCGGCTACGCTTGGGGTTTTGCAGACAACGGCAACCGTGCCGCAGAATCAGTTTTGGAGATATCGCCAAATATTAACTACACCGTCAGTGGGGAATCGATGCCCTATCTGTTATCCACGGATGGATCATTGACCGTACAAAAGGATGTTAAAGGTGCACTCGCCGGCAATAAGGGCAATGTCGTCCGTCGCATGTTCGTGGTGAACGATTCATTTGCGCCCGGAACACAAAGAGTAATTACCACAGGTGCCGCATCGACGGTGGTCAAAAAACAGGATTCTGGTCAGCAGGTGTTAAGCATAAATTCGCTCGATAAGAACTATCTATTAGTCGATCAGGCTACAGCGGCAGCGGCTGCAGCTGCAGCAGCAGCAGGTGGAGGTGGTGATCCATCAGCGGCAGCAGCAGCGGCTGCAGCACATCATGCTGCTGCAGCACATTTAACAAACGTTCAAGTACAGAAAGTAATACAAGGACTCGAAGAGAACGAGGACTCGCAGGGCGACGCACCCAACTTAAAGTTGGAGCCAGGCACATTAGAATTGTCCCCAAAGACCGAACTACAGGAATCAATGCATTTCAGCGAAACCGACGCCACCATCAAGAAGGAGCGCCCGTACAGTTGTGACGAGTGCGGTAAATCCTTTCTGCTCAAACATCATTTGACAACACACGCACGCGTGCACACAGGTGGTGAACGTCCACATATTTGCACCCATTGCGGCAAGAGCTTTGCGCACAAACATTGTCTAAACACGCATCTACTGCTACACTCAACGGATCGGCCATATCAGTGTCAGGAGTGCAAGAAGAGCTTTACCCTTAAGCATCATTTGCTGACGCATTCACGTGTCCATAGCCGGGAGCGACCATTTGTTTGCCAAGAGTGCGGCCGATCGTTTCCCTTGAAGCGTCATCTGGTGACGCACAGTAAATTTCACGCCGGCGAACGTCCCTACGTCTGCGAGGAATGTGGTGAAAGTTTTGCACAAGAGAATCATCTTATTATGCACTCGCGCTTTCATGGTTCATTGAATCCATTTGTTTGTGCTGATTGCGGTGCCTCGTTTCCACGTAAATTTCAACTGGTTAACCACGGTCGTATACACGGCAAAATCCCACACTCCTGCACAGTTTGCGGCAAAGAATTTCTACAGAAGCGCACACTAGTTTCCCACATGAGGCGCGTACACACCGGCGAGCAGGCGCATCCCTGCGTTAGCTGCGGCGAGGGTTTCCTCACCAAGGCGGAGCTGCATCAACATGTGCGTGCAGCGCACAATGGCGTCAATCCCAATACGAGCAGCGCCACAATTATAGCTAATCAACAGCAGATACAACAGCCGCATCATCATCCTGGACATCCGCAGACGATCACCGTGGTCAGCAATCCGGCTAACTCAACGCTACTGACCGTGTCCACAACCGATGCCAATGGTGTAGCGCGTCCACAATTTGTTTGCCGCGAATGTGGCAGTGCGTTTAACAGCCGCGAGGCGCTCGCCTTGCACTTGCGACTGCACACGGGCGACAAGAGCCTTATGACCGATTTGTGCGCCCTAACCGCCGCGCTGCCTGGTCACTTCTTGAGCACTAGCCTTAATCCCGGCACTGTGGTGACGGCAAATCCGAATCTGGTGGGACAGAGCCCGGTGCCGGTGCAAATAATATCGTCCACCGGTCAAGTGATGTCACAGACCACGCTGCACGGCCTGATGCAGCACAATCGACGACATCCCAACGGCGGCTGCACGGTGCGCACCCATGTTTGCGAGTGTGGAAAGGCGTTCTTCCAAAAGAATCATCTAATGCTGCATCAGCGACAGCATTTGGAAACGAAGCCAGCCATATCGCAGCAACAGGTATGCTAA
Protein Sequence: MCAAQSNPPPFGYAWGFADNGNRAAESVLEISPNINYTVSGESMPYLLSTDGSLTVQKDVKGALAGNKGNVVRRMFVVNDSFAPGTQRVITTGAASTVVKKQDSGQQVLSINSLDKNYLLVDQATAAAAAAAAAAGGGGDPSAAAAAAAAHHAAAAHLTNVQVQKVIQGLEENEDSQGDAPNLKLEPGTLELSPKTELQESMHFSETDATIKKERPYSCDECGKSFLLKHHLTTHARVHTGGERPHICTHCGKSFAHKHCLNTHLLLHSTDRPYQCQECKKSFTLKHHLLTHSRVHSRERPFVCQECGRSFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCADCGASFPRKFQLVNHGRIHGKIPHSCTVCGKEFLQKRTLVSHMRRVHTGEQAHPCVSCGEGFLTKAELHQHVRAAHNGVNPNTSSATIIANQQQIQQPHHHPGHPQTITVVSNPANSTLLTVSTTDANGVARPQFVCRECGSAFNSREALALHLRLHTGDKSLMTDLCALTAALPGHFLSTSLNPGTVVTANPNLVGQSPVPVQIISSTGQVMSQTTLHGLMQHNRRHPNGGCTVRTHVCECGKAFFQKNHLMLHQRQHLETKPAISQQQVC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01555604; iTF_01550484; iTF_01551896; iTF_01559932; iTF_01556989;
90% Identity: iTF_01551896;
80% Identity: -