Basic Information

Gene Symbol
ncor1
Assembly
GCA_018901805.1
Location
JAEIFH010001444.1:7123307-7128256[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.4e-08 4.7e-05 23.3 0.0 4 43 312 351 310 353 0.97

Sequence Information

Coding Sequence
ATGCCGGATTTCCAGCGCTCAAGCCGAGCGGCATCAGTTGTTGCTCCTGCCGGCGGCGGCGGTGGAGGCGGCGGCGGTGGGGGGCGGAAAGTCAGCACCTGGCTCAGGAGGTGGCGTTGTCCAAGTGGCAGGCAGCATGGCGCCTCCAGGTTCACAATCAGGGAAACATTACGCAAAAAGGAGAAGACACTGATGGATGAGGCAGCTGCCACAGCGTTGGCAAGCAAACAGCAAAAGGCTGCCGCCGAGCAAGCTGCCGCCGAGAGTGGCAATGAGATTATGGAGCTGGCGTGGCGTACACAAATGCTCGCGCAGAGCATCTACGAGGCGAATCGCAAAACAGCCGCCGCACAACATTCCCAGGTTAGTCGAGCCGGAGGAGGAGGTGCTGACACTGGTGGCATGGAACGGCCACGCCCCTGGCTGCCATTGTACAATCAGCCACTGGATGTGGAGGCACTCACACAGCTGATCAAACGCCATCAGACTATGGTGCGGAATCCGCTGTTGCAGCACATACGCAAACTGAAGGCCGAACGTTGGCTGCACAATCAGGGGCTGGTTGAGAAATATACCAAGGATCAGGCCGAGTGGCAGCGACGATGCGAACGTGCCGAGGGCAGTGCCAAGCGCAAAGCGCGTGAGGCCAAGAATCGTGAATTCTTCGAGAAAGTCTTTACGGAGCTGCGCAAACAGCGCGAGGATAAGGAACGTTTCAATCGTGTCGGCTCGCGTATCAAATCCGAGGCAGATCTCGAGGAGATCATGGACGGACTGCAGGAGCAGGCGCTGGAGGATAAGAAGATGCGTTCCTATGCAGTAATACCGCCCCTGATGCACGATGCCCGCCAGCGTCGCTGTGCGTATCACAATGAGAACGGGCGCATTGCGGACATGGTTGCCGTGCATGAGGAACGCAAGGCGCTCAATCTGTGGACCGCCGGCGAGAAGGAGACATTCAAGGAGAAGTATCTGCAGCATCCGAAGAATTTCGGTGCCATTGCGGCCAGTCTCGATCGCAAATCCCCCCAGGATTGTGTGCGCTATTACTACCTCAGCAAGAAGACGGAGAACTACAAGCAACTGTTGCGCAAGTCCCGCCAACGCACGCGCAGCAGTCGCAATCCGGCCAAGGCGCAGGCAGCGCAGCCCCAATGCATCATTGATTCCCTCACCACGGGCGTCACGACGCGCCTGCAGCGGGAGCAGCAACAGAAGAGCGGCAATCGCAGCAGTGCCGTCGCGGAGCGTGAACGCGCGGAGAGAGCCGCGGAGCGGGAGCGTAAGCTGAAGGCGGCACAGGTGGAGGGTTTGGGTGCTGGCAATGAGCTGCACTCGGAAGTGAGGTAA
Protein Sequence
MPDFQRSSRAASVVAPAGGGGGGGGGGGRKVSTWLRRWRCPSGRQHGASRFTIRETLRKKEKTLMDEAAATALASKQQKAAAEQAAAESGNEIMELAWRTQMLAQSIYEANRKTAAAQHSQVSRAGGGGADTGGMERPRPWLPLYNQPLDVEALTQLIKRHQTMVRNPLLQHIRKLKAERWLHNQGLVEKYTKDQAEWQRRCERAEGSAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLMHDARQRRCAYHNENGRIADMVAVHEERKALNLWTAGEKETFKEKYLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPAKAQAAQPQCIIDSLTTGVTTRLQREQQQKSGNRSSAVAERERAERAAERERKLKAAQVEGLGAGNELHSEVR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01550222;
90% Identity
iTF_01554639;
80% Identity
-