Ztar015024.1
Basic Information
- Insect
- Zaprionus taronus
- Gene Symbol
- -
- Assembly
- GCA_018901805.1
- Location
- JAEIFH010000440.1:1506230-1517963[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.9e-12 7.1e-09 35.2 0.0 1 41 208 249 208 252 0.90 2 4 2.3e-14 5.5e-11 41.9 0.1 2 39 263 300 262 303 0.94 3 4 4e-18 9.7e-15 53.9 0.0 1 45 317 362 317 362 0.98 4 4 2.5e-20 6.2e-17 61.0 0.0 1 43 369 412 369 414 0.96
Sequence Information
- Coding Sequence
- ATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTCACACCGGAACCACCAGCACCATCGGCCACACCAGTTACCGTTACGGAACACGTCGATTTATCGTGCAACCCCAGCACTGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATTTGGCTCAGCAAATTCATCGGCTCGATCAATCTCCCATGCACTCGATAGCGCATCATCATACGACCGGAGACGAGAGCAACTCGAATCTGGTGCAGCACATCAAAAGCGAAATTGATCCGAGCCAGATCAAACACGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACTGGGCATATGGATATGTACAACTCGGATACGAGCGAGGATTCGATGATGATTGCCAACGGTTCGCCGCACGATCAAAATGAACCGCACTATACGAATTTGGATCAGCAACACGGCGGCTTGGGTGGCAGTGTTTGTGGCCCCGGCGCCGGTGGTGTTGGTGGTGGTGGTGGCGGTGGCGGCATTGGTAGTGGTGGTGGTGGTAATGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCCTCGACAACATTATGGCAACGTGCACATCGTCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGTACCAAATCGTGGAACGAGGATGCCTTGCAGAGTGCACTGGAGGCATTGAGATCGGGCCAGATATCAGCTAATAAAGCATCCAAAGCGTTTGGTATTCCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGACTTGGAGCGTGCATTGGAGGCGATACGTGCTGGCAATACGTCGGTGCAAAAAGCGAGTGCCGAATTTGGCATACCAACAGGAACACTCTATGGACGCTGCAAACGGGAGGGCATCGAACTTTCACGTTCGAATCCAACACCTTGGTCCGAAGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGCCAGATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGTTCGCTCTACGGGCGCTTCAAGCGGGGCAAATACGACGTGGCCAACGTGAGCGGAGTCTCGTTGCTTAACGCTTCGGGCAACACCACCGGCAGCATTGAGATTATTGAACATAGTCAGGAGAATTCGTTGCATATGTTGCAGCAACAGTTCCCGTACAGGCTATCGGGCAGCGTTAACTCGGCCAAGTGCAACGACGTCGTTGTGAACGTGCTTTAA
- Protein Sequence
- MTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTTGDESNSNLVQHIKSEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGGGGIGSGGGGNAGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQSALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANVSGVSLLNASGNTTGSIEIIEHSQENSLHMLQQQFPYRLSGSVNSAKCNDVVVNVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -