Basic Information

Gene Symbol
ct
Assembly
GCA_018901805.1
Location
JAEIFH010001449.1:4679696-4695589[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.72 4.1e+03 -2.2 0.0 5 33 136 166 133 174 0.81
2 4 4.8e-27 2.7e-23 81.7 0.0 3 72 286 356 284 361 0.95
3 4 1.6e-31 8.9e-28 96.1 0.1 3 73 628 699 626 704 0.96
4 4 2.9e-31 1.6e-27 95.2 0.0 3 76 777 851 775 854 0.96

Sequence Information

Coding Sequence
ATGTGCTGCACAACGATGAGGAGCAGGACGAGGGAGGAGTTGGAGGCCGATGCTGATGATGCCGAGATGTCCAGTGTCGGCGCGACAGCAGAGAGCAGCAACGAGCTAAAAATCAAAAAGGAGCAACACAGTCCACTGGATCTGAATGTGCTCAGTCCACAGTCGGCCATCGCTGCCGCCGCCGCAGCCGCGGCAGCAGCTGCCTGCGCCAACGATCCCAACAAATTCCAAGCTCTGCTGCTGGAGCGGACCAAGGCTCTGGCCGCGGAGGCGCTCAAGAATGGCGCCAGCGATGCAGCCAGCGAAGAAATGCCGCAACAACAACAACTACAGGCAGCAGACGCCGCCGCCAACATCACAGCAGCAGCAACAACAGTCGCCGCAGCAAACGCCACCAGCACACCCAACAGCACCGCCCAGCTGGCAGCAAGCATTGCCAGCACCCTGAACGGCAACAAGTCGCTGCTACAGCAGGCAGCAGTGGCGGCCAATGTGGCTGCCGCTGCTGTTGCCGTTGTTGCCGAGTCGGACAACAACAACAGTCTGACACCGAATGCAAATGCCGCCGCCGTGATGGCTGCCCATGCACAGCATGCTGCCGCCGCTGCCCTGGGTGCGCCCAGTTTCTTGCCCAACTTGCCCAATCTGCCCAGTTTGCCAGCATTCCAATTCGCAGCTGCCGCTGCCGCTGGACAGGATCCGCGTGCGCATTTCCGTTTCGCCGATGCTGAGCTGCAACTGCAACCGGGCGTATCGATGGCCGGTCGGCTGGGTGAGTCCCTGATACCCAAGGGTGATCCCATGGAGGCCAAACTGCAGGAGATGCTGCGCTATAATATGGATAAATATGCCAATCAGGCACTGGACACGCTGCACATCTCACGGCGTGTGCGCGAACTGCTGTCGGTGCACAACATCGGGCAGCGATTGTTTGCCAAATACATATTGGGCCTGTCGCAGGGCACCGTCTCGGAGCTGCTCAGCAAACCGAAACCGTGGGACAAGCTGACGGAGAAGGGACGCGACAGTTACCGCAAGATGCACGCCTGGGCCTGCGATGATAATGCGGTCATGCTGCTCAAATCGCTCATACCCAAGAAAGACTCCGGCTTGCCACAATACACTGGACGCGGCGCTGGCGGCGATGATTCCATCTTCCTGCTGTCGCCCTTCTTTGGCGGCGCTGCCGGCATGCCCGGCGCAGCGGCCAATCACTTTCCCACCATGGCCGCCGACGAGAACATGCGCCATGCCGTAGAGCGTGAGATTGCCAAGCTGCAACAGCAGCACCAGCAGCAGGCGGCGCAGGCACAAGCCGCCAGTTTTCCCAATTTCTCCAGTTTGATGGCACTGCAGCAGCAGGTGCTGAACGGCGCCCAGGATCTGTCGCTGGCCGGCAAGGATATCAAGTTGAACGGTCAGCGCTCCTCCCTCGATGCCCTCAGCGGCAGCAGCAGCTCCAAGGATGGCGGCGAACGTGGCGACGATGTTGTCGAGCGCAGCAGCTTCGGCTCATCTCGGCCACAGCATGCCATGAAATCCGAAGGTGGCGGCGGCAACACACCCGCACCCCCAGCACCACCAGCACCGCCAGCTCCCGCAGGGAGCAATCCCGTTGCTGTCGCTGCCGCGGCCGCTGCTGCAGCAGCTGCTGCTGGCAGCAACTCAGCAGCGCCAAGTCCCCTAAGCAATTCCATATTGCCGCCAGCTCTGAGCAGCCAAGGCGAAGAGTTTGCGGCCACAGCGAGTCCGTTGCAACGCATGGCCTCGATCACCAACTCGCTGATCACACAGCCACCCGTGACGCCGCATCACTCGCAGCCGCAGCGACCCACCAAGGCGGTACTGCCGCCCATAACGCAGCAACAGTTCGATATGTTCAACAACCTCAACACGGAGGACATTGTGCGTCGCGTCAAGGAGGCCCTCTCCCAGTACAGCATCTCACAGCGACTCTTTGGCGAGTCAGTGTTGGGTTTGTCGCAGGGCTCCGTCTCGGATCTGCTGGCCAGGCCCAAGCCGTGGCACATGCTGACACAGAAGGGTCGCGAACCCTTCATACGCATGAAGATGTTCCTCGAGGATGAGAATGCGAATATGCTGCTCACCTCGCCCGGCCTGCCGCCACAGCATGCAATCAGTTTGCCCGCGGCCAACACGCCCGTCAGCGGTGTGCCCGGTGTGGGCAACACAGTCGGCGGCGGCGGCTCCAGCTCGGACAAGAAACCGATGCTGATGCCCGTGCATGGCGGCGCACACGGTCCCAATGCCATGCGCAGTCTGCACCAGCACATGTCGCCCACGGTGTACGAGATGGCTGCCCTCACACAGGATCTGGACACGCACGACATTACCACCAAGATCAAGGAGGCACTGCTGGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGTTGGGTCTGTCGCAGGGCTCCGTGTCGGAGCTGCTGAGCAAACCCAAGCCATGGCATATGTTGTCGATCAAGGGACGCGAACCCTTCATACGCATGCAACTGTGGCTGAGCGATGCCAACAATGTGGAGCGACTGCAGCTGCTGAAGAACGAGCGGCGGGAGGCGAGCAAGCGACGCCGCAGCACCGGACCCAATCAGCAGGACAACAGCAGCGATACGTCCAGCAATGATACAAATGATTTCTATACAAGCAGTCCGGGACCCGGTTCGGTGGGCTCGTCCGTCAGTGGCGCACCGCCAAGCAAGAAGCAGCGTGTACTGTTCTCCGAGGAGCAAAAGGAGGCACTGCGCTTGGCCTTTGCCCTCGATCCGTATCCGAATGTCGGCACCATTGAGTTTCTGGCCAACGAGCTGAGCCTGGCCACGCGCACCATCACCAACTGGTTCCACAATCATCGCATGCGCCTCAAGCAGCAGGTGCCACATGGCCAGCCCGGCCAGGATAATCCCATACCCAGTCGCGAGAACACCAATGCCACGCCCTTTGATCCCGTCCAGTTTCGCATACTCCTCCAGCAGCGTCTGGTCGAGCTGCACAAGGAGCGCATGGGCCTAAGCGGTGCGCCCATTCCATACCCACCGTACTTTGCTGCGGCTGCTCTGCTTGGTCGCAGCTTGGCCGGCATACCCGGTGCAGCAGCAGCGGCGGGCGCAGCAGCTGCCGCAGCGGCAGCCGTGGGCGCCGCTGGCGGCGATGAACTGCAGGCTCTCAATCAGGCATTCAAGGAGCAAATGAGCGGCCTGGATCTGTCCATGCCGACGCTGAAGCGCGAACGCAGCGATGACTATCAGGATGAACTGGAGCTGGATGCCAGTGCGCACAATATGAGCGACAATGAATCCCTCGAGGGTGCTGGCCACGAGTCGCAGCTGGACAGCTCTGTCGTGTCCGAGTACGAGAAGGTGCTGCAGAAGTCAGCGCTGGCCTCGGCTGCCGCTGCCGCCGCATACATGAGCAATGCGGCACGCAGCTCCCGGCGCAACAGTGAGCGCATCATCAATGGCGTCTGTGTCATGCAGGGATCGGACTACAGTCGCGACGATGGCGACAGTGTCAAGGGGGATGCGGGCGGCGATGCTGAGCATGGGGATCATTCGCATCTGGAGATCGAACAGAGTTTCATGGAGCCCGAGCTGAAGGTGATCAACGAGGAGAAGCTGCGTCTGGTGCGCGTGCGGCGTCTGAGCAGCAACGGCGATGCTGAGGAGCATTGTGCCGCAGCGCAGCAGGCGGCGACTGCAGCGACGCCAGCGGCAGCAGCGTGGAACTTTTAA
Protein Sequence
MCCTTMRSRTREELEADADDAEMSSVGATAESSNELKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASDAASEEMPQQQQLQAADAAANITAAATTVAAANATSTPNSTAQLAASIASTLNGNKSLLQQAAVAANVAAAAVAVVAESDNNNSLTPNANAAAVMAAHAQHAAAAALGAPSFLPNLPNLPSLPAFQFAAAAAAGQDPRAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYTGRGAGGDDSIFLLSPFFGGAAGMPGAAANHFPTMAADENMRHAVEREIAKLQQQHQQQAAQAQAASFPNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRSSLDALSGSSSSKDGGERGDDVVERSSFGSSRPQHAMKSEGGGGNTPAPPAPPAPPAPAGSNPVAVAAAAAAAAAAAGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENANMLLTSPGLPPQHAISLPAANTPVSGVPGVGNTVGGGGSSSDKKPMLMPVHGGAHGPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASAHNMSDNESLEGAGHESQLDSSVVSEYEKVLQKSALASAAAAAAYMSNAARSSRRNSERIINGVCVMQGSDYSRDDGDSVKGDAGGDAEHGDHSHLEIEQSFMEPELKVINEEKLRLVRVRRLSSNGDAEEHCAAAQQAATAATPAAAAWNF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01551508;
90% Identity
iTF_01558185;
80% Identity
iTF_01558185;